RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 MAVSQ7Z434 540 aa17.54■□□□□ 0.4
VRK3-225ENST00000601912 OR13H1Q8NG92 308 aa17.54■□□□□ 0.4
VRK3-225ENST00000601912 NECAB3Q96P71 396 aaPredicted RBP17.54■□□□□ 0.4
VRK3-225ENST00000601912 ZNF382Q96SR6 550 aa17.54■□□□□ 0.4
VRK3-225ENST00000601912 NOL11Q9H8H0 719 aaKnown RBP17.54■□□□□ 0.4
VRK3-225ENST00000601912 IPPKQ9H8X2 491 aa17.54■□□□□ 0.4
VRK3-225ENST00000601912 AASDHPPTQ9NRN7 309 aa17.54■□□□□ 0.4
VRK3-225ENST00000601912 SPATA6Q9NWH7 488 aaPredicted RBP17.54■□□□□ 0.4
VRK3-225ENST00000601912 PSMD13Q9UNM6 376 aa17.54■□□□□ 0.4
VRK3-225ENST00000601912 CCT8L1PA6NM43 557 aa17.53■□□□□ 0.4
VRK3-225ENST00000601912 TMEM233B4DJY2 109 aa17.53■□□□□ 0.4
VRK3-225ENST00000601912 AZIN1O14977 448 aa17.53■□□□□ 0.4
VRK3-225ENST00000601912 MAP3K13O43283 966 aa17.53■□□□□ 0.4
VRK3-225ENST00000601912 CD27P26842 260 aa17.53■□□□□ 0.4
VRK3-225ENST00000601912 SRP54P61011 504 aaKnown RBP17.53■□□□□ 0.4
VRK3-225ENST00000601912 LRP8Q14114 963 aa17.53■□□□□ 0.4
VRK3-225ENST00000601912 PDCD2Q16342 344 aaPredicted RBP17.53■□□□□ 0.4
VRK3-225ENST00000601912 CWF19L1Q69YN2 538 aaKnown RBP17.53■□□□□ 0.4
VRK3-225ENST00000601912 SPDYE1Q8NFV5 336 aaPredicted RBP17.53■□□□□ 0.4
VRK3-225ENST00000601912 RAD51AP1Q96B01 352 aa17.53■□□□□ 0.4
VRK3-225ENST00000601912 PDXPQ96GD0 296 aa17.53■□□□□ 0.4
VRK3-225ENST00000601912 PKP4Q99569 1192 aa17.53■□□□□ 0.4
VRK3-225ENST00000601912 EBF4Q9BQW3 602 aa17.53■□□□□ 0.4
VRK3-225ENST00000601912 NUF2Q9BZD4 464 aa17.53■□□□□ 0.4
VRK3-225ENST00000601912 DLGAP2Q9P1A6 1054 aa17.53■□□□□ 0.4
VRK3-225ENST00000601912 THEGLP0DJG4 465 aa17.52■□□□□ 0.4
VRK3-225ENST00000601912 RPL10P27635 214 aaKnown RBP17.52■□□□□ 0.4
VRK3-225ENST00000601912 CCNG1P51959 295 aa17.52■□□□□ 0.4
VRK3-225ENST00000601912 PTCHD3Q3KNS1 767 aa17.52■□□□□ 0.4
VRK3-225ENST00000601912 TPRG1LQ5T0D9 272 aa17.52■□□□□ 0.4
VRK3-225ENST00000601912 VWA5B1Q5TIE3 1220 aa17.52■□□□□ 0.4
VRK3-225ENST00000601912 DCUN1D3Q8IWE4 304 aa17.52■□□□□ 0.4
VRK3-225ENST00000601912 HOMEZQ8IX15 550 aa17.52■□□□□ 0.4
VRK3-225ENST00000601912 OR9A1PQ8NGU1 263 aa17.52■□□□□ 0.4
VRK3-225ENST00000601912 TSACCQ96A04 125 aaPredicted RBP17.52■□□□□ 0.4
VRK3-225ENST00000601912 KLHDC7BQ96G42 594 aa17.52■□□□□ 0.4
VRK3-225ENST00000601912 TNFRSF12AQ9NP84 129 aa17.52■□□□□ 0.4
VRK3-225ENST00000601912 STOX2Q9P2F5 926 aaPredicted RBP17.52■□□□□ 0.4
VRK3-225ENST00000601912 ZFC3H1O60293 1989 aaKnown RBP17.52■□□□□ 0.39
VRK3-225ENST00000601912 MEI4A8MW99 385 aa17.52■□□□□ 0.39
VRK3-225ENST00000601912 MYO1CO00159 1063 aa17.52■□□□□ 0.39
VRK3-225ENST00000601912 HGSO14964 777 aaPredicted RBP17.52■□□□□ 0.39
VRK3-225ENST00000601912 PI15O43692 258 aa17.52■□□□□ 0.39
VRK3-225ENST00000601912 WDR47O94967 919 aa17.52■□□□□ 0.39
VRK3-225ENST00000601912 SLC16A8O95907 504 aa17.52■□□□□ 0.39
VRK3-225ENST00000601912 CHEK2O96017 543 aa17.52■□□□□ 0.39
VRK3-225ENST00000601912 PDGFBP01127 241 aaPredicted RBP17.52■□□□□ 0.39
VRK3-225ENST00000601912 AOC1P19801 751 aa17.52■□□□□ 0.39
VRK3-225ENST00000601912 SERPINB3P29508 390 aa17.52■□□□□ 0.39
VRK3-225ENST00000601912 HOXA6P31267 233 aa17.52■□□□□ 0.39
VRK3-225ENST00000601912 SLC6A12P48065 614 aa17.52■□□□□ 0.39
VRK3-225ENST00000601912 CCSMST1Q4G0I0 132 aa17.52■□□□□ 0.39
VRK3-225ENST00000601912 KANK2Q63ZY3 851 aa17.52■□□□□ 0.39
VRK3-225ENST00000601912 CLEC6AQ6EIG7 209 aa17.52■□□□□ 0.39
VRK3-225ENST00000601912 CAPRIN2Q6IMN6 1127 aaKnown RBP17.52■□□□□ 0.39
VRK3-225ENST00000601912 AGTRAPQ6RW13 159 aa17.52■□□□□ 0.39
VRK3-225ENST00000601912 ACAD11Q709F0 780 aa17.52■□□□□ 0.39
VRK3-225ENST00000601912 EFL1Q7Z2Z2 1120 aaKnown RBP17.52■□□□□ 0.39
VRK3-225ENST00000601912 SYVN1Q86TM6 617 aa17.52■□□□□ 0.39
VRK3-225ENST00000601912 MTDHQ86UE4 582 aaKnown RBP17.52■□□□□ 0.39
VRK3-225ENST00000601912 DCP2Q8IU60 420 aaKnown RBP17.52■□□□□ 0.39
VRK3-225ENST00000601912 DEFB119Q8N690 84 aa17.52■□□□□ 0.39
VRK3-225ENST00000601912 GBP7Q8N8V2 638 aaPredicted RBP17.52■□□□□ 0.39
VRK3-225ENST00000601912 STON2Q8WXE9 905 aa17.52■□□□□ 0.39
VRK3-225ENST00000601912 ORAI3Q9BRQ5 295 aa17.52■□□□□ 0.39
VRK3-225ENST00000601912 ATG10Q9H0Y0 220 aa17.52■□□□□ 0.39
VRK3-225ENST00000601912 TRIT1Q9H3H1 467 aaKnown RBP17.52■□□□□ 0.39
VRK3-225ENST00000601912 PLEKHM1Q9Y4G2 1056 aa17.52■□□□□ 0.39
VRK3-225ENST00000601912 DGKBQ9Y6T7 804 aa17.52■□□□□ 0.39
VRK3-225ENST00000601912 CCDC163A0A0D9SF12 145 aa17.51■□□□□ 0.39
VRK3-225ENST00000601912 PRR19A6NJB7 356 aa17.51■□□□□ 0.39
VRK3-225ENST00000601912 PDZK1P1A8MUH7 402 aa17.51■□□□□ 0.39
VRK3-225ENST00000601912 OR7A17O14581 309 aa17.51■□□□□ 0.39
VRK3-225ENST00000601912 DCXO43602 365 aa17.51■□□□□ 0.39
VRK3-225ENST00000601912 CCDC22O60826 627 aa17.51■□□□□ 0.39
VRK3-225ENST00000601912 KIAA0754O94854 1291 aa17.51■□□□□ 0.39
VRK3-225ENST00000601912 RASGRP1O95267 797 aa17.51■□□□□ 0.39
VRK3-225ENST00000601912 TNFP01375 233 aa17.51■□□□□ 0.39
VRK3-225ENST00000601912 UROSP10746 265 aa17.51■□□□□ 0.39
VRK3-225ENST00000601912 ALG11Q2TAA5 492 aa17.51■□□□□ 0.39
VRK3-225ENST00000601912 SLC9B1Q4ZJI4 515 aa17.51■□□□□ 0.39
VRK3-225ENST00000601912 CCDC121Q6ZUS5 278 aa17.51■□□□□ 0.39
VRK3-225ENST00000601912 MILR1Q7Z6M3 343 aa17.51■□□□□ 0.39
VRK3-225ENST00000601912 HID1Q8IV36 788 aa17.51■□□□□ 0.39
VRK3-225ENST00000601912 TBC1D21Q8IYX1 336 aa17.51■□□□□ 0.39
VRK3-225ENST00000601912 SNX31Q8N9S9 440 aa17.51■□□□□ 0.39
VRK3-225ENST00000601912 OR52B6Q8NGF0 335 aa17.51■□□□□ 0.39
VRK3-225ENST00000601912 OR5K2Q8NHB8 316 aa17.51■□□□□ 0.39
VRK3-225ENST00000601912 MAPK15Q8TD08 544 aa17.51■□□□□ 0.39
VRK3-225ENST00000601912 SKA1Q96BD8 255 aa17.51■□□□□ 0.39
VRK3-225ENST00000601912 C12orf66Q96MD2 445 aa17.51■□□□□ 0.39
VRK3-225ENST00000601912 SLC6A18Q96N87 628 aa17.51■□□□□ 0.39
VRK3-225ENST00000601912 NUSAP1Q9BXS6 441 aaKnown RBP17.51■□□□□ 0.39
VRK3-225ENST00000601912 TCF7L2Q9NQB0 619 aa17.51■□□□□ 0.39
VRK3-225ENST00000601912 PFDN4Q9NQP4 134 aa17.51■□□□□ 0.39
VRK3-225ENST00000601912 ABCF3Q9NUQ8 709 aa17.51■□□□□ 0.39
VRK3-225ENST00000601912 DNAJC11Q9NVH1 559 aa17.51■□□□□ 0.39
VRK3-225ENST00000601912 TRNAU1APQ9NX07 287 aaKnown RBP17.51■□□□□ 0.39
VRK3-225ENST00000601912 ZFP69BQ9UJL9 534 aa17.51■□□□□ 0.39
VRK3-225ENST00000601912 SPTY2D1-AS1A0A0U1RR47 76 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms