RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 PLLPQ9Y342 182 aa19.92■□□□□ 0.78
PNKP-215ENST00000600910 OARD1Q9Y530 152 aa19.92■□□□□ 0.78
PNKP-215ENST00000600910 COLEC10Q9Y6Z7 277 aa19.92■□□□□ 0.78
PNKP-215ENST00000600910 TRIM38O00635 465 aa19.91■□□□□ 0.78
PNKP-215ENST00000600910 PRPF4O43172 522 aaKnown RBP eCLIP19.91■□□□□ 0.786e-7■■■■□ 23.2
PNKP-215ENST00000600910 KERAO60938 352 aa19.91■□□□□ 0.78
PNKP-215ENST00000600910 ENO2P09104 434 aaPredicted RBP19.91■□□□□ 0.78
PNKP-215ENST00000600910 RPA3P35244 121 aaPredicted RBP19.91■□□□□ 0.78
PNKP-215ENST00000600910 UBE2IP63279 158 aaKnown RBP19.91■□□□□ 0.78
PNKP-215ENST00000600910 SUZ12Q15022 739 aaKnown RBP19.91■□□□□ 0.78
PNKP-215ENST00000600910 TTC23LQ6PF05 361 aa19.91■□□□□ 0.78
PNKP-215ENST00000600910 SLC9B2Q86UD5 537 aa19.91■□□□□ 0.78
PNKP-215ENST00000600910 GPSM1Q86YR5 675 aa19.91■□□□□ 0.78
PNKP-215ENST00000600910 TMEM151AQ8N4L1 468 aa19.91■□□□□ 0.78
PNKP-215ENST00000600910 ARL10Q8N8L6 244 aa19.91■□□□□ 0.78
PNKP-215ENST00000600910 KYQ8NBH2 561 aa19.91■□□□□ 0.78
PNKP-215ENST00000600910 GPR156Q8NFN8 814 aa19.91■□□□□ 0.78
PNKP-215ENST00000600910 MAGEC3Q8TD91 643 aa19.91■□□□□ 0.78
PNKP-215ENST00000600910 MCOLN3Q8TDD5 553 aa19.91■□□□□ 0.78
PNKP-215ENST00000600910 EXT2Q93063 718 aa19.91■□□□□ 0.78
PNKP-215ENST00000600910 ATOH8Q96SQ7 321 aa19.91■□□□□ 0.78
PNKP-215ENST00000600910 MRPL46Q9H2W6 279 aaKnown RBP19.91■□□□□ 0.78
PNKP-215ENST00000600910 TMEM9BQ9NQ34 198 aa19.91■□□□□ 0.78
PNKP-215ENST00000600910 POT1Q9NUX5 634 aa19.91■□□□□ 0.78
PNKP-215ENST00000600910 CIDEBQ9UHD4 219 aa19.91■□□□□ 0.78
PNKP-215ENST00000600910 TDRKHQ9Y2W6 561 aaKnown RBP19.91■□□□□ 0.78
PNKP-215ENST00000600910 CCDC189A1A4V9 331 aa19.91■□□□□ 0.78
PNKP-215ENST00000600910 VIPP01282 170 aa19.91■□□□□ 0.78
PNKP-215ENST00000600910 HIST1H2AGP0C0S8 130 aaPredicted RBP19.91■□□□□ 0.78
PNKP-215ENST00000600910 HIST1H2ADP20671 130 aa19.91■□□□□ 0.78
PNKP-215ENST00000600910 NDUFS1P28331 727 aa19.91■□□□□ 0.78
PNKP-215ENST00000600910 HPDP32754 393 aaPredicted RBP19.91■□□□□ 0.78
PNKP-215ENST00000600910 RPIAP49247 311 aa19.91■□□□□ 0.78
PNKP-215ENST00000600910 HHEXQ03014 270 aa19.91■□□□□ 0.78
PNKP-215ENST00000600910 TGFBIQ15582 683 aa19.91■□□□□ 0.78
PNKP-215ENST00000600910 AASDHQ4L235 1098 aaPredicted RBP19.91■□□□□ 0.78
PNKP-215ENST00000600910 C14orf28Q4W4Y0 310 aa19.91■□□□□ 0.78
PNKP-215ENST00000600910 ZCCHC8Q6NZY4 707 aaKnown RBP19.91■□□□□ 0.78
PNKP-215ENST00000600910 ASCL5Q7RTU5 278 aa19.91■□□□□ 0.78
PNKP-215ENST00000600910 C17orf82Q86X59 251 aaPredicted RBP19.91■□□□□ 0.78
PNKP-215ENST00000600910 SLC35F3Q8IY50 421 aa19.91■□□□□ 0.78
PNKP-215ENST00000600910 ARL14Q8N4G2 192 aa19.91■□□□□ 0.78
PNKP-215ENST00000600910 EID2Q8N6I1 236 aa19.91■□□□□ 0.78
PNKP-215ENST00000600910 FBXO15Q8NCQ5 510 aaPredicted RBP19.91■□□□□ 0.78
PNKP-215ENST00000600910 HIST1H2AHQ96KK5 128 aa19.91■□□□□ 0.78
PNKP-215ENST00000600910 FAM111AQ96PZ2 611 aa19.91■□□□□ 0.78
PNKP-215ENST00000600910 HIST1H2AJQ99878 128 aa19.91■□□□□ 0.78
PNKP-215ENST00000600910 H2AFJQ9BTM1 129 aa19.91■□□□□ 0.78
PNKP-215ENST00000600910 TRIM54Q9BYV2 358 aa19.91■□□□□ 0.78
PNKP-215ENST00000600910 SLC40A1Q9NP59 571 aa19.91■□□□□ 0.78
PNKP-215ENST00000600910 SLC17A7Q9P2U7 560 aa19.91■□□□□ 0.78
PNKP-215ENST00000600910 PCDHGB2Q9Y5G2 931 aa19.91■□□□□ 0.78
PNKP-215ENST00000600910 TMEM120BA0PK00 339 aa19.9■□□□□ 0.78
PNKP-215ENST00000600910 PABPN1LA6NDY0 278 aaKnown RBP19.9■□□□□ 0.78
PNKP-215ENST00000600910 H3BQF6 201 aa19.9■□□□□ 0.78
PNKP-215ENST00000600910 SIGLEC6O43699 453 aa19.9■□□□□ 0.78
PNKP-215ENST00000600910 PLIN3O60664 434 aa19.9■□□□□ 0.78
PNKP-215ENST00000600910 GUCA1CO95843 209 aa19.9■□□□□ 0.78
PNKP-215ENST00000600910 PROCP04070 461 aa19.9■□□□□ 0.78
PNKP-215ENST00000600910 SBK3P0C264 359 aa19.9■□□□□ 0.78
PNKP-215ENST00000600910 MPP2Q14168 576 aa19.9■□□□□ 0.78
PNKP-215ENST00000600910 CCDC153Q494R4 210 aa19.9■□□□□ 0.78
PNKP-215ENST00000600910 MBOAT1Q6ZNC8 495 aa19.9■□□□□ 0.78
PNKP-215ENST00000600910 RAD51AP1Q96B01 352 aa19.9■□□□□ 0.78
PNKP-215ENST00000600910 CAMK1GQ96NX5 476 aa19.9■□□□□ 0.78
PNKP-215ENST00000600910 RDH14Q9HBH5 336 aa19.9■□□□□ 0.78
PNKP-215ENST00000600910 POLG2Q9UHN1 485 aa19.9■□□□□ 0.78
PNKP-215ENST00000600910 BTBD3Q9Y2F9 522 aa19.9■□□□□ 0.78
PNKP-215ENST00000600910 ARID1BQ8NFD5 2236 aaPredicted RBP19.89■□□□□ 0.77
PNKP-215ENST00000600910 NCF1BA6NI72 391 aaPredicted RBP19.89■□□□□ 0.77
PNKP-215ENST00000600910 SYCE1LA8MT33 242 aa19.89■□□□□ 0.77
PNKP-215ENST00000600910 NCF1CA8MVU1 366 aaPredicted RBP19.89■□□□□ 0.77
PNKP-215ENST00000600910 TARM1B6A8C7 271 aa19.89■□□□□ 0.77
PNKP-215ENST00000600910 UBXN8O00124 270 aa19.89■□□□□ 0.77
PNKP-215ENST00000600910 NCF1P14598 390 aaPredicted RBP19.89■□□□□ 0.77
PNKP-215ENST00000600910 FASLGP48023 281 aa19.89■□□□□ 0.77
PNKP-215ENST00000600910 GRB7Q14451 532 aa19.89■□□□□ 0.77
PNKP-215ENST00000600910 DBX2Q6ZNG2 339 aa19.89■□□□□ 0.77
PNKP-215ENST00000600910 CCDC63Q8NA47 563 aa19.89■□□□□ 0.77
PNKP-215ENST00000600910 PKP4Q99569 1192 aa19.89■□□□□ 0.77
PNKP-215ENST00000600910 SELENOSQ9BQE4 189 aa19.89■□□□□ 0.77
PNKP-215ENST00000600910 STN1Q9H668 368 aaKnown RBP19.89■□□□□ 0.77
PNKP-215ENST00000600910 KIR3DX1Q9H7L2 352 aa19.89■□□□□ 0.77
PNKP-215ENST00000600910 ARL15Q9NXU5 204 aa19.89■□□□□ 0.77
PNKP-215ENST00000600910 PLAGL1Q9UM63 463 aa19.89■□□□□ 0.77
PNKP-215ENST00000600910 SUPT3HB4E1H0 165 aa19.88■□□□□ 0.77
PNKP-215ENST00000600910 MYO1CO00159 1063 aa19.88■□□□□ 0.77
PNKP-215ENST00000600910 FOXD2O60548 495 aaPredicted RBP19.88■□□□□ 0.77
PNKP-215ENST00000600910 SUPT3HO75486 399 aa19.88■□□□□ 0.77
PNKP-215ENST00000600910 TPBGLP0DKB5 382 aa19.88■□□□□ 0.77
PNKP-215ENST00000600910 MTHFD2P13995 350 aa19.88■□□□□ 0.77
PNKP-215ENST00000600910 AP1S2P56377 157 aa19.88■□□□□ 0.77
PNKP-215ENST00000600910 SLC14A1Q13336 389 aa19.88■□□□□ 0.77
PNKP-215ENST00000600910 BIRC2Q13490 618 aa19.88■□□□□ 0.77
PNKP-215ENST00000600910 GPR18Q14330 331 aa19.88■□□□□ 0.77
PNKP-215ENST00000600910 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.88■□□□□ 0.77
PNKP-215ENST00000600910 AVL9Q8NBF6 648 aa19.88■□□□□ 0.77
PNKP-215ENST00000600910 ARMC2Q8NEN0 867 aa19.88■□□□□ 0.77
PNKP-215ENST00000600910 OR52E1Q8NGJ3 308 aa19.88■□□□□ 0.77
PNKP-215ENST00000600910 OR9A1PQ8NGU1 263 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms