RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 POM121BA6NF01 834 aa17.21■□□□□ 0.35
SHKBP1-224ENST00000600718 KATNA1O75449 491 aa17.21■□□□□ 0.35
SHKBP1-224ENST00000600718 CHEK2O96017 543 aa17.21■□□□□ 0.35
SHKBP1-224ENST00000600718 FUCA1P04066 466 aa17.21■□□□□ 0.35
SHKBP1-224ENST00000600718 NCF2P19878 526 aaPredicted RBP17.21■□□□□ 0.35
SHKBP1-224ENST00000600718 PRDX3P30048 256 aaKnown RBP17.21■□□□□ 0.35
SHKBP1-224ENST00000600718 SLC6A12P48065 614 aa17.21■□□□□ 0.35
SHKBP1-224ENST00000600718 CCNG1P51959 295 aa17.21■□□□□ 0.35
SHKBP1-224ENST00000600718 FOXA1P55317 472 aa17.21■□□□□ 0.35
SHKBP1-224ENST00000600718 ERVPABLB-1P60509 514 aa17.21■□□□□ 0.35
SHKBP1-224ENST00000600718 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.21■□□□□ 0.35
SHKBP1-224ENST00000600718 KIAA0895LQ68EN5 471 aa17.21■□□□□ 0.35
SHKBP1-224ENST00000600718 NXNQ6DKJ4 435 aa17.21■□□□□ 0.35
SHKBP1-224ENST00000600718 UNC5DQ6UXZ4 953 aa17.21■□□□□ 0.35
SHKBP1-224ENST00000600718 MILR1Q7Z6M3 343 aa17.21■□□□□ 0.35
SHKBP1-224ENST00000600718 OR52B6Q8NGF0 335 aa17.21■□□□□ 0.35
SHKBP1-224ENST00000600718 TWIST2Q8WVJ9 160 aa17.21■□□□□ 0.35
SHKBP1-224ENST00000600718 TOE1Q96GM8 510 aaKnown RBP17.21■□□□□ 0.35
SHKBP1-224ENST00000600718 BMFQ96LC9 184 aa17.21■□□□□ 0.35
SHKBP1-224ENST00000600718 HHIPQ96QV1 700 aa17.21■□□□□ 0.35
SHKBP1-224ENST00000600718 TIMM29Q9BSF4 260 aa17.21■□□□□ 0.35
SHKBP1-224ENST00000600718 TBC1D17Q9HA65 648 aa17.21■□□□□ 0.35
SHKBP1-224ENST00000600718 PFDN4Q9NQP4 134 aa17.21■□□□□ 0.35
SHKBP1-224ENST00000600718 WSB2Q9NYS7 404 aaPredicted RBP17.21■□□□□ 0.35
SHKBP1-224ENST00000600718 THEGQ9P2T0 379 aa17.21■□□□□ 0.35
SHKBP1-224ENST00000600718 ACSL5Q9ULC5 683 aa17.21■□□□□ 0.35
SHKBP1-224ENST00000600718 CAPN14A8MX76 684 aa17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 TOR1BO14657 336 aa17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 OR4F21O95013 312 aa17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 APBB3O95704 486 aa17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 KELP23276 732 aa17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 CD6P30203 668 aa17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 CLDN2P57739 230 aa17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 PTCHD3Q3KNS1 767 aa17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 WLSQ5T9L3 541 aa17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 PDZD3Q86UT5 571 aa17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 GALNT13Q8IUC8 556 aa17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 MAGEC3Q8TD91 643 aa17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 CLDN23Q96B33 292 aa17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 C19orf60Q96EN9 201 aa17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 NSL1Q96IY1 281 aa17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 KCNA7Q96RP8 456 aa17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 PKP4Q99569 1192 aa17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 NTMT1Q9BV86 223 aa17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 ZDHHC5Q9C0B5 715 aa17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 SLC40A1Q9NP59 571 aa17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 TM7SF3Q9NS93 570 aa17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 ARMCX1Q9P291 453 aa17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 E9PBE3 544 aa17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 KLHL41O60662 606 aa17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 UNC5CO95185 931 aa17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 ENO1P06733 434 aaKnown RBP17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 T-ENOLP0DO92 83 aa17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 NUDT1P36639 197 aa17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 BDKRB1P46663 353 aa17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 PFN3P60673 137 aa17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 YPEL5P62699 121 aa17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 TRAF3Q13114 568 aa17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 NFATC4Q14934 902 aa17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 ZXDCQ2QGD7 858 aaPredicted RBP17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 PYCR3Q53H96 274 aa17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 CHST15Q7LFX5 561 aaPredicted RBP17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 SPEM1Q8N4L4 309 aa17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 OR4F6Q8NGB9 312 aa17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 UHRF1Q96T88 793 aaPredicted RBP17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 CCT7Q99832 543 aa17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 C6orf106Q9H6K1 298 aaPredicted RBP17.2■□□□□ 0.34
SHKBP1-224ENST00000600718 STK25O00506 426 aa17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 HNRNPCL1O60812 293 aaKnown RBP17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 WDR47O94967 919 aa17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 EBLN1P0CF75 366 aa17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 ARL1P40616 181 aaPredicted RBP17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 LETMD1Q6P1Q0 360 aa17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 KLHDC8AQ8IYD2 350 aa17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 METTL6Q8TCB7 284 aa17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 CHRDQ9H2X0 955 aa17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 ARL8BQ9NVJ2 186 aa17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 STOX2Q9P2F5 926 aaPredicted RBP17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 MCM8Q9UJA3 840 aa17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 MOSPD1Q9UJG1 213 aa17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 SUFUQ9UMX1 484 aa17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 DMTF1Q9Y222 760 aa17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 TIMM22Q9Y584 194 aa17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 ST14Q9Y5Y6 855 aa17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 PRAMEF26H0Y7S4 382 aa17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 IFRD1O00458 451 aaPredicted RBP17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 VPS4BO75351 444 aa17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 IGHV4-34P06331 123 aa17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 HGFP14210 728 aa17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 AOC1P19801 751 aa17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 HTR1BP28222 390 aa17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 UBAP2LQ14157 1087 aaKnown RBP17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 CCSMST1Q4G0I0 132 aa17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 AGTRAPQ6RW13 159 aa17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 GJD3Q8N144 294 aa17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 CPSF7Q8N684 471 aaKnown RBP17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 CDYL2Q8N8U2 506 aa17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 SNX31Q8N9S9 440 aa17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 OR9A1PQ8NGU1 263 aa17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 TFGQ92734 400 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms