RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 CHD8Q9HCK8 2581 aa13.35□□□□□ -0.27
VRK3-219ENST00000600137 MN1Q10571 1320 aaPredicted RBP13.35□□□□□ -0.27
VRK3-219ENST00000600137 ANKRD12Q6UB98 2062 aa13.35□□□□□ -0.27
VRK3-219ENST00000600137 SNRNP200O75643 2136 aaKnown RBP13.34□□□□□ -0.27
VRK3-219ENST00000600137 OR5K3A6NET4 321 aa13.34□□□□□ -0.27
VRK3-219ENST00000600137 ARHGEF33A8MVX0 844 aa13.34□□□□□ -0.27
VRK3-219ENST00000600137 KIF1CO43896 1103 aaKnown RBP13.34□□□□□ -0.27
VRK3-219ENST00000600137 THRAP10827 490 aa13.34□□□□□ -0.27
VRK3-219ENST00000600137 ENO3P13929 434 aaPredicted RBP13.34□□□□□ -0.27
VRK3-219ENST00000600137 MPSTP25325 297 aa13.34□□□□□ -0.27
VRK3-219ENST00000600137 PHBP35232 272 aa13.34□□□□□ -0.27
VRK3-219ENST00000600137 SPRP35270 261 aaPredicted RBP13.34□□□□□ -0.27
VRK3-219ENST00000600137 GMPRP36959 345 aa13.34□□□□□ -0.27
VRK3-219ENST00000600137 CAPZBP47756 277 aa13.34□□□□□ -0.27
VRK3-219ENST00000600137 POU4F1Q01851 419 aa13.34□□□□□ -0.27
VRK3-219ENST00000600137 SLC29A2Q14542 456 aa13.34□□□□□ -0.27
VRK3-219ENST00000600137 ZNF460Q14592 562 aa13.34□□□□□ -0.27
VRK3-219ENST00000600137 ZKSCAN8Q15776 578 aaPredicted RBP13.34□□□□□ -0.27
VRK3-219ENST00000600137 TTLL9Q3SXZ7 439 aa13.34□□□□□ -0.27
VRK3-219ENST00000600137 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.34□□□□□ -0.27
VRK3-219ENST00000600137 UGT3A1Q6NUS8 523 aa13.34□□□□□ -0.27
VRK3-219ENST00000600137 LINC01555Q8NAE3 123 aa13.34□□□□□ -0.27
VRK3-219ENST00000600137 FBXO15Q8NCQ5 510 aaPredicted RBP13.34□□□□□ -0.27
VRK3-219ENST00000600137 DENND1AQ8TEH3 1009 aa13.34□□□□□ -0.27
VRK3-219ENST00000600137 AENQ8WTP8 325 aaKnown RBP13.34□□□□□ -0.27
VRK3-219ENST00000600137 UBXN4Q92575 508 aa13.34□□□□□ -0.27
VRK3-219ENST00000600137 PRR11Q96HE9 360 aaPredicted RBP13.34□□□□□ -0.27
VRK3-219ENST00000600137 ELMO2Q96JJ3 720 aa13.34□□□□□ -0.27
VRK3-219ENST00000600137 PARD6BQ9BYG5 372 aa13.34□□□□□ -0.27
VRK3-219ENST00000600137 CIDEBQ9UHD4 219 aa13.34□□□□□ -0.27
VRK3-219ENST00000600137 POLG2Q9UHN1 485 aa13.34□□□□□ -0.27
VRK3-219ENST00000600137 TRMT6Q9UJA5 497 aaKnown RBP13.34□□□□□ -0.27
VRK3-219ENST00000600137 TSR3Q9UJK0 312 aaKnown RBP13.34□□□□□ -0.27
VRK3-219ENST00000600137 ADAMTS6Q9UKP5 1117 aa13.34□□□□□ -0.27
VRK3-219ENST00000600137 RAB21Q9UL25 225 aa13.34□□□□□ -0.27
VRK3-219ENST00000600137 SLC39A10Q9ULF5 831 aa13.34□□□□□ -0.27
VRK3-219ENST00000600137 PLAGL1Q9UM63 463 aa13.34□□□□□ -0.27
VRK3-219ENST00000600137 MSRB2Q9Y3D2 182 aa13.34□□□□□ -0.27
VRK3-219ENST00000600137 PMS2P1A4D2B8 440 aa13.33□□□□□ -0.28
VRK3-219ENST00000600137 OR6C74A6NCV1 312 aa13.33□□□□□ -0.28
VRK3-219ENST00000600137 BTN3A1O00481 513 aa13.33□□□□□ -0.28
VRK3-219ENST00000600137 CAPN5O15484 640 aaPredicted RBP13.33□□□□□ -0.28
VRK3-219ENST00000600137 ZW10O43264 779 aa13.33□□□□□ -0.28
VRK3-219ENST00000600137 DUX1O43812 170 aa13.33□□□□□ -0.28
VRK3-219ENST00000600137 PRICKLE3O43900 615 aaPredicted RBP13.33□□□□□ -0.28
VRK3-219ENST00000600137 CAPNS1P04632 268 aa13.33□□□□□ -0.28
VRK3-219ENST00000600137 ITGA2BP08514 1039 aa13.33□□□□□ -0.28
VRK3-219ENST00000600137 ZNF37AP17032 561 aaPredicted RBP13.33□□□□□ -0.28
VRK3-219ENST00000600137 AMD1P17707 334 aa13.33□□□□□ -0.28
VRK3-219ENST00000600137 PEBP1P30086 187 aaKnown RBP13.33□□□□□ -0.28
VRK3-219ENST00000600137 PKLRP30613 574 aa13.33□□□□□ -0.28
VRK3-219ENST00000600137 MAPK9P45984 424 aa13.33□□□□□ -0.28
VRK3-219ENST00000600137 BDKRB1P46663 353 aa13.33□□□□□ -0.28
VRK3-219ENST00000600137 ILF2Q12905 390 aaKnown RBP13.33□□□□□ -0.28
VRK3-219ENST00000600137 C16orf72Q14CZ0 275 aa13.33□□□□□ -0.28
VRK3-219ENST00000600137 AMIGO1Q86WK6 493 aa13.33□□□□□ -0.28
VRK3-219ENST00000600137 DCUN1D3Q8IWE4 304 aa13.33□□□□□ -0.28
VRK3-219ENST00000600137 DCAKDQ8WVC6 231 aa13.33□□□□□ -0.28
VRK3-219ENST00000600137 LCN9Q8WX39 176 aa13.33□□□□□ -0.28
VRK3-219ENST00000600137 MRRFQ96E11 262 aaKnown RBP13.33□□□□□ -0.28
VRK3-219ENST00000600137 PPM1MQ96MI6 270 aa13.33□□□□□ -0.28
VRK3-219ENST00000600137 DEPDC7Q96QD5 511 aa13.33□□□□□ -0.28
VRK3-219ENST00000600137 DPYSL5Q9BPU6 564 aa13.33□□□□□ -0.28
VRK3-219ENST00000600137 SYNDIG1Q9H7V2 258 aa13.33□□□□□ -0.28
VRK3-219ENST00000600137 POPDC3Q9HBV1 291 aa13.33□□□□□ -0.28
VRK3-219ENST00000600137 HRASLS2Q9NWW9 162 aa13.33□□□□□ -0.28
VRK3-219ENST00000600137 SPHK1Q9NYA1 384 aa13.33□□□□□ -0.28
VRK3-219ENST00000600137 PCM1Q15154 2024 aa13.33□□□□□ -0.28
VRK3-219ENST00000600137 A0A087WUV0 522 aaPredicted RBP13.32□□□□□ -0.28
VRK3-219ENST00000600137 MYO1CO00159 1063 aa13.32□□□□□ -0.28
VRK3-219ENST00000600137 ERGP11308 486 aa13.32□□□□□ -0.28
VRK3-219ENST00000600137 POLR2CP19387 275 aaPredicted RBP13.32□□□□□ -0.28
VRK3-219ENST00000600137 SAT1P21673 171 aa13.32□□□□□ -0.28
VRK3-219ENST00000600137 LSSP48449 732 aa13.32□□□□□ -0.28
VRK3-219ENST00000600137 KPNA2P52292 529 aaKnown RBP13.32□□□□□ -0.28
VRK3-219ENST00000600137 INHBCP55103 352 aa13.32□□□□□ -0.28
VRK3-219ENST00000600137 PDAP1Q13442 181 aaKnown RBP13.32□□□□□ -0.28
VRK3-219ENST00000600137 KRT33BQ14525 404 aa13.32□□□□□ -0.28
VRK3-219ENST00000600137 PLCL1Q15111 1095 aa13.32□□□□□ -0.28
VRK3-219ENST00000600137 ZXDCQ2QGD7 858 aaPredicted RBP13.32□□□□□ -0.28
VRK3-219ENST00000600137 LRRC56Q8IYG6 542 aaPredicted RBP13.32□□□□□ -0.28
VRK3-219ENST00000600137 RCBTB1Q8NDN9 531 aa13.32□□□□□ -0.28
VRK3-219ENST00000600137 RAD51AP1Q96B01 352 aa13.32□□□□□ -0.28
VRK3-219ENST00000600137 GRAMD1AQ96CP6 724 aa13.32□□□□□ -0.28
VRK3-219ENST00000600137 LINGO1Q96FE5 620 aa13.32□□□□□ -0.28
VRK3-219ENST00000600137 LIN37Q96GY3 246 aaPredicted RBP13.32□□□□□ -0.28
VRK3-219ENST00000600137 AHCYL2Q96HN2 611 aaKnown RBP13.32□□□□□ -0.28
VRK3-219ENST00000600137 UBXN10Q96LJ8 280 aa13.32□□□□□ -0.28
VRK3-219ENST00000600137 CCDC74BQ96LY2 380 aa13.32□□□□□ -0.28
VRK3-219ENST00000600137 TMEM74Q96NL1 305 aa13.32□□□□□ -0.28
VRK3-219ENST00000600137 IL17FQ96PD4 163 aa13.32□□□□□ -0.28
VRK3-219ENST00000600137 PAFAH2Q99487 392 aa13.32□□□□□ -0.28
VRK3-219ENST00000600137 SLC12A9Q9BXP2 914 aa13.32□□□□□ -0.28
VRK3-219ENST00000600137 SRMSQ9H3Y6 488 aa13.32□□□□□ -0.28
VRK3-219ENST00000600137 TDRKHQ9Y2W6 561 aaKnown RBP13.32□□□□□ -0.28
VRK3-219ENST00000600137 FREM2Q5SZK8 3169 aa13.32□□□□□ -0.28
VRK3-219ENST00000600137 A0A1W2PPV9 198 aa13.31□□□□□ -0.28
VRK3-219ENST00000600137 TRABD2BA6NFA1 517 aa13.31□□□□□ -0.28
VRK3-219ENST00000600137 RASGRF2O14827 1237 aa13.31□□□□□ -0.28
VRK3-219ENST00000600137 PHGDHO43175 533 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms