RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 PNMA8BQ9ULN7 279 aaPredicted RBP15.06■□□□□ 0
UPF1-206ENST00000598471 HCN4Q9Y3Q4 1203 aa15.06■□□□□ 0
UPF1-206ENST00000598471 ATXN2Q99700 1313 aaKnown RBP15.06■□□□□ 0
UPF1-206ENST00000598471 CEP192Q8TEP8 1941 aa15.05■□□□□ 0
UPF1-206ENST00000598471 MYO1CO00159 1063 aa15.05■□□□□ -0
UPF1-206ENST00000598471 SNNO75324 88 aaPredicted RBP15.05■□□□□ -0
UPF1-206ENST00000598471 SUPT7LO94864 414 aa15.05■□□□□ -0
UPF1-206ENST00000598471 SLC1A6P48664 564 aa15.05■□□□□ -0
UPF1-206ENST00000598471 PIK3CGP48736 1102 aa15.05■□□□□ -0
UPF1-206ENST00000598471 PCBP2Q15366 365 aaKnown RBP eCLIP15.05■□□□□ -0
UPF1-206ENST00000598471 ZNF542PQ5EBM4 170 aa15.05■□□□□ -0
UPF1-206ENST00000598471 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.05■□□□□ -0
UPF1-206ENST00000598471 ABRAXAS1Q6UWZ7 409 aa15.05■□□□□ -0
UPF1-206ENST00000598471 FAM47EQ6ZV65 393 aa15.05■□□□□ -0
UPF1-206ENST00000598471 TAF8Q7Z7C8 310 aa15.05■□□□□ -0
UPF1-206ENST00000598471 GKN2Q86XP6 184 aa15.05■□□□□ -0
UPF1-206ENST00000598471 CRLF3Q8IUI8 442 aa15.05■□□□□ -0
UPF1-206ENST00000598471 SYT12Q8IV01 421 aa15.05■□□□□ -0
UPF1-206ENST00000598471 LRRC34Q8IZ02 419 aa15.05■□□□□ -0
UPF1-206ENST00000598471 KIRREL3Q8IZU9 778 aa15.05■□□□□ -0
UPF1-206ENST00000598471 SDR16C5Q8N3Y7 309 aa15.05■□□□□ -0
UPF1-206ENST00000598471 SPDYE1Q8NFV5 336 aaPredicted RBP15.05■□□□□ -0
UPF1-206ENST00000598471 OR9A1PQ8NGU1 263 aa15.05■□□□□ -0
UPF1-206ENST00000598471 OR6Y1Q8NGX8 325 aa15.05■□□□□ -0
UPF1-206ENST00000598471 OR5K2Q8NHB8 316 aa15.05■□□□□ -0
UPF1-206ENST00000598471 PIGKQ92643 395 aa15.05■□□□□ -0
UPF1-206ENST00000598471 C7orf26Q96N11 449 aa15.05■□□□□ -0
UPF1-206ENST00000598471 ZNF317Q96PQ6 595 aaPredicted RBP15.05■□□□□ -0
UPF1-206ENST00000598471 FERD3LQ96RJ6 166 aa15.05■□□□□ -0
UPF1-206ENST00000598471 C1QTNF3Q9BXJ4 246 aa15.05■□□□□ -0
UPF1-206ENST00000598471 PITPNM3Q9BZ71 974 aa15.05■□□□□ -0
UPF1-206ENST00000598471 DRC3Q9H069 523 aa15.05■□□□□ -0
UPF1-206ENST00000598471 EPN3Q9H201 632 aa15.05■□□□□ -0
UPF1-206ENST00000598471 TCEAL2Q9H3H9 227 aaPredicted RBP15.05■□□□□ -0
UPF1-206ENST00000598471 MVB12BQ9H7P6 319 aa15.05■□□□□ -0
UPF1-206ENST00000598471 ERVMER34-1Q9H9K5 563 aa15.05■□□□□ -0
UPF1-206ENST00000598471 PRDM8Q9NQV8 689 aa15.05■□□□□ -0
UPF1-206ENST00000598471 FAM86C1Q9NVL1 165 aa15.05■□□□□ -0
UPF1-206ENST00000598471 OPTCQ9UBM4 332 aa15.05■□□□□ -0
UPF1-206ENST00000598471 TBC1D29Q9UFV1 150 aa15.05■□□□□ -0
UPF1-206ENST00000598471 POLG2Q9UHN1 485 aa15.05■□□□□ -0
UPF1-206ENST00000598471 PILRBQ9UKJ0 227 aa15.05■□□□□ -0
UPF1-206ENST00000598471 STK38LQ9Y2H1 464 aa15.05■□□□□ -0
UPF1-206ENST00000598471 COLEC10Q9Y6Z7 277 aa15.05■□□□□ -0
UPF1-206ENST00000598471 THADAQ6YHU6 1953 aa15.05■□□□□ -0
UPF1-206ENST00000598471 A0A1B0GVT2 93 aa15.04■□□□□ -0
UPF1-206ENST00000598471 OR5K4A6NMS3 321 aa15.04■□□□□ -0
UPF1-206ENST00000598471 ZNF839A8K0R7 811 aa15.04■□□□□ -0
UPF1-206ENST00000598471 GIPC1O14908 333 aa15.04■□□□□ -0
UPF1-206ENST00000598471 EDF1O60869 148 aaKnown RBP15.04■□□□□ -0
UPF1-206ENST00000598471 RPS17P08708 135 aaKnown RBP15.04■□□□□ -0
UPF1-206ENST00000598471 MTHFD1P11586 935 aaKnown RBP15.04■□□□□ -0
UPF1-206ENST00000598471 F3P13726 295 aa15.04■□□□□ -0
UPF1-206ENST00000598471 HSD17B2P37059 387 aa15.04■□□□□ -0
UPF1-206ENST00000598471 TCEA2Q15560 299 aa15.04■□□□□ -0
UPF1-206ENST00000598471 UNC50Q53HI1 259 aa15.04■□□□□ -0
UPF1-206ENST00000598471 PRRT3Q5FWE3 981 aa15.04■□□□□ -0
UPF1-206ENST00000598471 ZC3H14Q6PJT7 736 aaKnown RBP15.04■□□□□ -0
UPF1-206ENST00000598471 MBOAT1Q6ZNC8 495 aa15.04■□□□□ -0
UPF1-206ENST00000598471 PRR23BQ6ZRT6 265 aa15.04■□□□□ -0
UPF1-206ENST00000598471 FRMD7Q6ZUT3 714 aa15.04■□□□□ -0
UPF1-206ENST00000598471 LRRC70Q7Z2Q7 622 aa15.04■□□□□ -0
UPF1-206ENST00000598471 CPLX4Q7Z7G2 160 aa15.04■□□□□ -0
UPF1-206ENST00000598471 NRROSQ86YC3 692 aa15.04■□□□□ -0
UPF1-206ENST00000598471 PHC3Q8NDX5 983 aa15.04■□□□□ -0
UPF1-206ENST00000598471 OR5AR1Q8NGP9 310 aa15.04■□□□□ -0
UPF1-206ENST00000598471 CEP76Q8TAP6 659 aa15.04■□□□□ -0
UPF1-206ENST00000598471 ATOH1Q92858 354 aaPredicted RBP15.04■□□□□ -0
UPF1-206ENST00000598471 CXorf40BQ96DE9 158 aa15.04■□□□□ -0
UPF1-206ENST00000598471 INSM2Q96T92 566 aaPredicted RBP15.04■□□□□ -0
UPF1-206ENST00000598471 PKP4Q99569 1192 aa15.04■□□□□ -0
UPF1-206ENST00000598471 LRRC61Q9BV99 259 aa15.04■□□□□ -0
UPF1-206ENST00000598471 RAB11FIP5Q9BXF6 653 aa15.04■□□□□ -0
UPF1-206ENST00000598471 CD244Q9BZW8 370 aa15.04■□□□□ -0
UPF1-206ENST00000598471 FGFR1OP2Q9NVK5 253 aa15.04■□□□□ -0
UPF1-206ENST00000598471 SPATA7Q9P0W8 599 aa15.04■□□□□ -0
UPF1-206ENST00000598471 TAAR2Q9P1P5 351 aa15.04■□□□□ -0
UPF1-206ENST00000598471 KLF15Q9UIH9 416 aa15.04■□□□□ -0
UPF1-206ENST00000598471 LNPEPQ9UIQ6 1025 aa15.04■□□□□ -0
UPF1-206ENST00000598471 DOLKQ9UPQ8 538 aa15.04■□□□□ -0
UPF1-206ENST00000598471 WDR37Q9Y2I8 494 aa15.04■□□□□ -0
UPF1-206ENST00000598471 ANGPTL3Q9Y5C1 460 aa15.04■□□□□ -0
UPF1-206ENST00000598471 LRP4O75096 1905 aa15.04■□□□□ -0
UPF1-206ENST00000598471 K7EPI3 171 aa15.03■□□□□ -0
UPF1-206ENST00000598471 STK16O75716 305 aa15.03■□□□□ -0
UPF1-206ENST00000598471 SIX3O95343 332 aaPredicted RBP15.03■□□□□ -0
UPF1-206ENST00000598471 MLYCDO95822 493 aa15.03■□□□□ -0
UPF1-206ENST00000598471 GGT5P36269 586 aa15.03■□□□□ -0
UPF1-206ENST00000598471 CTSKP43235 329 aa15.03■□□□□ -0
UPF1-206ENST00000598471 HSPA7P48741 367 aa15.03■□□□□ -0
UPF1-206ENST00000598471 ARRB1P49407 418 aaPredicted RBP15.03■□□□□ -0
UPF1-206ENST00000598471 SEC24CP53992 1094 aa15.03■□□□□ -0
UPF1-206ENST00000598471 OCRLQ01968 901 aa15.03■□□□□ -0
UPF1-206ENST00000598471 GALNT1Q10472 559 aaPredicted RBP15.03■□□□□ -0
UPF1-206ENST00000598471 PRKAA1Q13131 559 aa15.03■□□□□ -0
UPF1-206ENST00000598471 CLCA4Q14CN2 919 aa15.03■□□□□ -0
UPF1-206ENST00000598471 RPE65Q16518 533 aa15.03■□□□□ -0
UPF1-206ENST00000598471 DUOXA1Q1HG43 343 aa15.03■□□□□ -0
UPF1-206ENST00000598471 PEAR1Q5VY43 1037 aaPredicted RBP15.03■□□□□ -0
UPF1-206ENST00000598471 TRIM48Q8IWZ4 208 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms