RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 FAM117AQ9C073 453 aa13.34□□□□□ -0.27
SCAF1-203ENST00000598359 TFB2MQ9H5Q4 396 aaKnown RBP13.34□□□□□ -0.27
SCAF1-203ENST00000598359 LHX9Q9NQ69 397 aa13.34□□□□□ -0.27
SCAF1-203ENST00000598359 ARGLU1Q9NWB6 273 aaPredicted RBP13.34□□□□□ -0.27
SCAF1-203ENST00000598359 GEMIN8Q9NWZ8 242 aaKnown RBP13.34□□□□□ -0.27
SCAF1-203ENST00000598359 CIDEBQ9UHD4 219 aa13.34□□□□□ -0.27
SCAF1-203ENST00000598359 RAB21Q9UL25 225 aa13.34□□□□□ -0.27
SCAF1-203ENST00000598359 PADI1Q9ULC6 663 aa13.34□□□□□ -0.27
SCAF1-203ENST00000598359 ASF1AQ9Y294 204 aa13.34□□□□□ -0.27
SCAF1-203ENST00000598359 DRG1Q9Y295 367 aaKnown RBP13.34□□□□□ -0.27
SCAF1-203ENST00000598359 UBR5O95071 2799 aaPredicted RBP13.34□□□□□ -0.27
SCAF1-203ENST00000598359 MGAT1P26572 445 aa13.33□□□□□ -0.28
SCAF1-203ENST00000598359 NMBRP28336 390 aa13.33□□□□□ -0.28
SCAF1-203ENST00000598359 CCR7P32248 378 aa13.33□□□□□ -0.28
SCAF1-203ENST00000598359 CSRP3P50461 194 aa13.33□□□□□ -0.28
SCAF1-203ENST00000598359 ABRQ12979 859 aa13.33□□□□□ -0.28
SCAF1-203ENST00000598359 GPS2Q13227 327 aa13.33□□□□□ -0.28
SCAF1-203ENST00000598359 PCID2Q5JVF3 399 aa13.33□□□□□ -0.28
SCAF1-203ENST00000598359 COLEC12Q5KU26 742 aa13.33□□□□□ -0.28
SCAF1-203ENST00000598359 TMTC4Q5T4D3 741 aa13.33□□□□□ -0.28
SCAF1-203ENST00000598359 LCN10Q6JVE6 187 aa13.33□□□□□ -0.28
SCAF1-203ENST00000598359 CREG2Q8IUH2 290 aa13.33□□□□□ -0.28
SCAF1-203ENST00000598359 KRT222Q8N1A0 295 aa13.33□□□□□ -0.28
SCAF1-203ENST00000598359 OR1L3Q8NH93 324 aa13.33□□□□□ -0.28
SCAF1-203ENST00000598359 UBE2Q2Q8WVN8 375 aa13.33□□□□□ -0.28
SCAF1-203ENST00000598359 MS4A14Q96JA4 679 aa13.33□□□□□ -0.28
SCAF1-203ENST00000598359 CATSPER2Q96P56 530 aa13.33□□□□□ -0.28
SCAF1-203ENST00000598359 TRAPPC9Q96Q05 1148 aa13.33□□□□□ -0.28
SCAF1-203ENST00000598359 ANKZF1Q9H8Y5 726 aa13.33□□□□□ -0.28
SCAF1-203ENST00000598359 ZNF71Q9NQZ8 489 aaPredicted RBP13.33□□□□□ -0.28
SCAF1-203ENST00000598359 C1GALT1Q9NS00 363 aa13.33□□□□□ -0.28
SCAF1-203ENST00000598359 CATSPERZQ9NTU4 200 aa13.33□□□□□ -0.28
SCAF1-203ENST00000598359 SPHK1Q9NYA1 384 aa13.33□□□□□ -0.28
SCAF1-203ENST00000598359 ACTR10Q9NZ32 417 aa13.33□□□□□ -0.28
SCAF1-203ENST00000598359 RIMKLBQ9ULI2 386 aa13.33□□□□□ -0.28
SCAF1-203ENST00000598359 BTRCQ9Y297 605 aa13.33□□□□□ -0.28
SCAF1-203ENST00000598359 HEMK1Q9Y5R4 338 aaPredicted RBP13.33□□□□□ -0.28
SCAF1-203ENST00000598359 PIKFYVEQ9Y2I7 2098 aa13.32□□□□□ -0.28
SCAF1-203ENST00000598359 PIPSLA2A3N6 862 aa13.32□□□□□ -0.28
SCAF1-203ENST00000598359 CDC14CA4D256 554 aa13.32□□□□□ -0.28
SCAF1-203ENST00000598359 TMEM150CB9EJG8 249 aa13.32□□□□□ -0.28
SCAF1-203ENST00000598359 GOLGA8KD6RF30 607 aa13.32□□□□□ -0.28
SCAF1-203ENST00000598359 GOLGA8TH3BQL2 631 aa13.32□□□□□ -0.28
SCAF1-203ENST00000598359 QSOX1O00391 747 aa13.32□□□□□ -0.28
SCAF1-203ENST00000598359 GSTM1P09488 218 aa13.32□□□□□ -0.28
SCAF1-203ENST00000598359 ATXN8OSP0DMR3 200 aa13.32□□□□□ -0.28
SCAF1-203ENST00000598359 MC1RQ01726 317 aa13.32□□□□□ -0.28
SCAF1-203ENST00000598359 GSTM4Q03013 218 aa13.32□□□□□ -0.28
SCAF1-203ENST00000598359 HSPA14Q0VDF9 509 aa13.32□□□□□ -0.28
SCAF1-203ENST00000598359 LAMB3Q13751 1172 aa13.32□□□□□ -0.28
SCAF1-203ENST00000598359 FAM69BQ5VUD6 431 aa13.32□□□□□ -0.28
SCAF1-203ENST00000598359 LYPLAL1Q5VWZ2 237 aa13.32□□□□□ -0.28
SCAF1-203ENST00000598359 TTC27Q6P3X3 843 aa13.32□□□□□ -0.28
SCAF1-203ENST00000598359 CYB5D1Q6P9G0 228 aa13.32□□□□□ -0.28
SCAF1-203ENST00000598359 UNC5AQ6ZN44 842 aa13.32□□□□□ -0.28
SCAF1-203ENST00000598359 FAM20CQ8IXL6 584 aa13.32□□□□□ -0.28
SCAF1-203ENST00000598359 CFAP61Q8NHU2 1237 aa13.32□□□□□ -0.28
SCAF1-203ENST00000598359 MAIP1Q8WWC4 291 aa13.32□□□□□ -0.28
SCAF1-203ENST00000598359 AP1M1Q9BXS5 423 aa13.32□□□□□ -0.28
SCAF1-203ENST00000598359 PITPNM3Q9BZ71 974 aa13.32□□□□□ -0.28
SCAF1-203ENST00000598359 TWSG1Q9GZX9 223 aa13.32□□□□□ -0.28
SCAF1-203ENST00000598359 SLC25A18Q9H1K4 315 aa13.32□□□□□ -0.28
SCAF1-203ENST00000598359 ACTL8Q9H568 366 aa13.32□□□□□ -0.28
SCAF1-203ENST00000598359 EIF2B3Q9NR50 452 aaKnown RBP13.32□□□□□ -0.28
SCAF1-203ENST00000598359 SYBUQ9NX95 663 aa13.32□□□□□ -0.28
SCAF1-203ENST00000598359 CCDC151A5D8V7 595 aa13.31□□□□□ -0.28
SCAF1-203ENST00000598359 C2orf74A8MZ97 194 aa13.31□□□□□ -0.28
SCAF1-203ENST00000598359 MATN2O00339 956 aa13.31□□□□□ -0.28
SCAF1-203ENST00000598359 CD3EAPO15446 510 aaKnown RBP13.31□□□□□ -0.28
SCAF1-203ENST00000598359 HCRTR1O43613 425 aa13.31□□□□□ -0.28
SCAF1-203ENST00000598359 CPNE3O75131 537 aaKnown RBP13.31□□□□□ -0.28
SCAF1-203ENST00000598359 AVILO75366 819 aa13.31□□□□□ -0.28
SCAF1-203ENST00000598359 CREG1O75629 220 aa13.31□□□□□ -0.28
SCAF1-203ENST00000598359 MT-ND3P03897 115 aa13.31□□□□□ -0.28
SCAF1-203ENST00000598359 UGT2B7P16662 529 aa13.31□□□□□ -0.28
SCAF1-203ENST00000598359 ZIC1Q15915 447 aa13.31□□□□□ -0.28
SCAF1-203ENST00000598359 DEFB110Q30KQ9 67 aa13.31□□□□□ -0.28
SCAF1-203ENST00000598359 ZNF789Q5FWF6 425 aa13.31□□□□□ -0.28
SCAF1-203ENST00000598359 ANKRD22Q5VYY1 191 aa13.31□□□□□ -0.28
SCAF1-203ENST00000598359 SPESP1Q6UW49 350 aa13.31□□□□□ -0.28
SCAF1-203ENST00000598359 CDHR3Q6ZTQ4 885 aa13.31□□□□□ -0.28
SCAF1-203ENST00000598359 NLRP9Q7RTR0 991 aa13.31□□□□□ -0.28
SCAF1-203ENST00000598359 TBC1D21Q8IYX1 336 aa13.31□□□□□ -0.28
SCAF1-203ENST00000598359 CARFQ8N187 725 aa13.31□□□□□ -0.28
SCAF1-203ENST00000598359 MMGT1Q8N4V1 131 aa13.31□□□□□ -0.28
SCAF1-203ENST00000598359 C2orf73Q8N5S3 287 aaPredicted RBP13.31□□□□□ -0.28
SCAF1-203ENST00000598359 OR5K2Q8NHB8 316 aa13.31□□□□□ -0.28
SCAF1-203ENST00000598359 APOBEC4Q8WW27 367 aaKnown RBP13.31□□□□□ -0.28
SCAF1-203ENST00000598359 MR1Q95460 341 aa13.31□□□□□ -0.28
SCAF1-203ENST00000598359 MFSD3Q96ES6 412 aa13.31□□□□□ -0.28
SCAF1-203ENST00000598359 FCRL4Q96PJ5 515 aa13.31□□□□□ -0.28
SCAF1-203ENST00000598359 OR2A14Q96R47 310 aa13.31□□□□□ -0.28
SCAF1-203ENST00000598359 TTC1Q99614 292 aa13.31□□□□□ -0.28
SCAF1-203ENST00000598359 TRIM56Q9BRZ2 755 aaKnown RBP13.31□□□□□ -0.28
SCAF1-203ENST00000598359 CHST8Q9H2A9 424 aa13.31□□□□□ -0.28
SCAF1-203ENST00000598359 ADNPQ9H2P0 1102 aa13.31□□□□□ -0.28
SCAF1-203ENST00000598359 FAM60AQ9NP50 221 aa13.31□□□□□ -0.28
SCAF1-203ENST00000598359 TREX1Q9NSU2 369 aa13.31□□□□□ -0.28
SCAF1-203ENST00000598359 BFARQ9NZS9 450 aa13.31□□□□□ -0.28
SCAF1-203ENST00000598359 TSR3Q9UJK0 312 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms