RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 STX7O15400 261 aaKnown RBP9.75□□□□□ -0.85
TRIM28-210ENST00000597618 BUD23O43709 281 aaKnown RBP9.75□□□□□ -0.85
TRIM28-210ENST00000597618 PROSCO94903 275 aa9.75□□□□□ -0.85
TRIM28-210ENST00000597618 UNC5CO95185 931 aa9.75□□□□□ -0.85
TRIM28-210ENST00000597618 PIM1P11309 404 aaPredicted RBP9.75□□□□□ -0.85
TRIM28-210ENST00000597618 UGT2B7P16662 529 aa9.75□□□□□ -0.85
TRIM28-210ENST00000597618 AGAP20933 346 aa9.75□□□□□ -0.85
TRIM28-210ENST00000597618 CD151P48509 253 aa9.75□□□□□ -0.85
TRIM28-210ENST00000597618 CASP6P55212 293 aa9.75□□□□□ -0.85
TRIM28-210ENST00000597618 WNT3AP56704 352 aa9.75□□□□□ -0.85
TRIM28-210ENST00000597618 ZIC1Q15915 447 aa9.75□□□□□ -0.85
TRIM28-210ENST00000597618 RBBP7Q16576 425 aa9.75□□□□□ -0.85
TRIM28-210ENST00000597618 SLC5A12Q1EHB4 618 aa9.75□□□□□ -0.85
TRIM28-210ENST00000597618 TEX44Q53QW1 395 aa9.75□□□□□ -0.85
TRIM28-210ENST00000597618 SLC9A4Q6AI14 798 aa9.75□□□□□ -0.85
TRIM28-210ENST00000597618 KIRREL2Q6UWL6 708 aa9.75□□□□□ -0.85
TRIM28-210ENST00000597618 OVCH1Q7RTY7 1134 aa9.75□□□□□ -0.85
TRIM28-210ENST00000597618 TMEM151BQ8IW70 566 aa9.75□□□□□ -0.85
TRIM28-210ENST00000597618 SLC25A41Q8N5S1 370 aa9.75□□□□□ -0.85
TRIM28-210ENST00000597618 CATSPER1Q8NEC5 780 aa9.75□□□□□ -0.85
TRIM28-210ENST00000597618 NAT14Q8WUY8 206 aa9.75□□□□□ -0.85
TRIM28-210ENST00000597618 C14orf79Q96F83 325 aa9.75□□□□□ -0.85
TRIM28-210ENST00000597618 TAAR6Q96RI8 345 aa9.75□□□□□ -0.85
TRIM28-210ENST00000597618 SPSB2Q99619 263 aa9.75□□□□□ -0.85
TRIM28-210ENST00000597618 HGH1Q9BTY7 390 aa9.75□□□□□ -0.85
TRIM28-210ENST00000597618 SLC26A1Q9H2B4 701 aa9.75□□□□□ -0.85
TRIM28-210ENST00000597618 OR52A5Q9H2C5 316 aa9.75□□□□□ -0.85
TRIM28-210ENST00000597618 XKR8Q9H6D3 395 aa9.75□□□□□ -0.85
TRIM28-210ENST00000597618 COG4Q9H9E3 785 aa9.75□□□□□ -0.85
TRIM28-210ENST00000597618 VPS37BQ9H9H4 285 aa9.75□□□□□ -0.85
TRIM28-210ENST00000597618 SEMA3GQ9NS98 782 aa9.75□□□□□ -0.85
TRIM28-210ENST00000597618 SLC22A11Q9NSA0 550 aa9.75□□□□□ -0.85
TRIM28-210ENST00000597618 LCMT1Q9UIC8 334 aa9.75□□□□□ -0.85
TRIM28-210ENST00000597618 NXT1Q9UKK6 140 aaKnown RBP9.75□□□□□ -0.85
TRIM28-210ENST00000597618 PLCL2Q9UPR0 1127 aa9.75□□□□□ -0.85
TRIM28-210ENST00000597618 FBN3Q75N90 2809 aa9.75□□□□□ -0.85
TRIM28-210ENST00000597618 A0A0J9YY10 115 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 LRRD1A4D1F6 860 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 CFAP99D6REC4 459 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 APOL1O14791 398 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 HCRTR1O43613 425 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 SGTAO43765 313 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 PRICKLE3O43900 615 aaPredicted RBP9.74□□□□□ -0.85
TRIM28-210ENST00000597618 DIAPH2O60879 1101 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 SRP72O76094 671 aaKnown RBP9.74□□□□□ -0.85
TRIM28-210ENST00000597618 USP1O94782 785 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 ONECUT2O95948 504 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 CRYABP02511 175 aaKnown RBP9.74□□□□□ -0.85
TRIM28-210ENST00000597618 CTSBP07858 339 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 CD1EP15812 388 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 ZFXP17010 805 aaPredicted RBP9.74□□□□□ -0.85
TRIM28-210ENST00000597618 ITGAXP20702 1163 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 ALAS2P22557 587 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 KDELR1P24390 212 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 PTPN3P26045 913 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 SHMT2P34897 504 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 PBX1P40424 430 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 CHRNA4P43681 627 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 SMSP52788 366 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 ARSFP54793 590 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 TAS2R40P59535 323 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 TMPRSS15P98073 1019 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 RBPJQ06330 500 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 RPA4Q13156 261 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 PRKG2Q13237 762 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 BOP1Q14137 746 aaKnown RBP9.74□□□□□ -0.85
TRIM28-210ENST00000597618 SLC1A5Q15758 541 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 NKG7Q16617 165 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 ZNF449Q6P9G9 518 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 KDELC1Q6UW63 502 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 VSIG1Q86XK7 387 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 CPNE8Q86YQ8 564 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 OR11G2Q8NGC1 345 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 HEXDCQ8WVB3 486 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 CHTF18Q8WVB6 975 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 RAPGEF5Q92565 580 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 TEKT5Q96M29 485 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 OR2A14Q96R47 310 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 NRTNQ99748 197 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 HSD3B7Q9H2F3 369 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 ASB8Q9H765 288 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 ANO10Q9NW15 660 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 ABI3Q9P2A4 366 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 SEC14L3Q9UDX4 400 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 ICKQ9UPZ9 632 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 BZW2Q9Y6E2 419 aaKnown RBP9.74□□□□□ -0.85
TRIM28-210ENST00000597618 NUP210LQ5VU65 1888 aa9.74□□□□□ -0.85
TRIM28-210ENST00000597618 DOCK10Q96BY6 2186 aa9.73□□□□□ -0.85
TRIM28-210ENST00000597618 KLHL18O94889 574 aa9.73□□□□□ -0.85
TRIM28-210ENST00000597618 HPP00738 406 aa9.73□□□□□ -0.85
TRIM28-210ENST00000597618 CHRM5P08912 532 aaPredicted RBP9.73□□□□□ -0.85
TRIM28-210ENST00000597618 FDXRP22570 491 aa9.73□□□□□ -0.85
TRIM28-210ENST00000597618 GCGRP47871 477 aa9.73□□□□□ -0.85
TRIM28-210ENST00000597618 TNFSF10P50591 281 aa9.73□□□□□ -0.85
TRIM28-210ENST00000597618 KRTAP10-9P60411 292 aa9.73□□□□□ -0.85
TRIM28-210ENST00000597618 Q0VFX4 171 aa9.73□□□□□ -0.85
TRIM28-210ENST00000597618 UNC5AQ6ZN44 842 aa9.73□□□□□ -0.85
TRIM28-210ENST00000597618 TTLL10Q6ZVT0 673 aa9.73□□□□□ -0.85
TRIM28-210ENST00000597618 DNAJC22Q8N4W6 341 aa9.73□□□□□ -0.85
TRIM28-210ENST00000597618 PHC3Q8NDX5 983 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms