RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 SDK2Q58EX2 2172 aa10.82□□□□□ -0.68
VRK3-210ENST00000596121 ESYT3A0FGR9 886 aa10.81□□□□□ -0.68
VRK3-210ENST00000596121 SLC9B1P1A6NJY1 282 aa10.81□□□□□ -0.68
VRK3-210ENST00000596121 EFSO43281 561 aa10.81□□□□□ -0.68
VRK3-210ENST00000596121 RASSF9O75901 435 aa10.81□□□□□ -0.68
VRK3-210ENST00000596121 PIAS1O75925 651 aa10.81□□□□□ -0.68
VRK3-210ENST00000596121 TTC4O95801 387 aa10.81□□□□□ -0.68
VRK3-210ENST00000596121 PVRP15151 417 aa10.81□□□□□ -0.68
VRK3-210ENST00000596121 FOLR1P15328 257 aa10.81□□□□□ -0.68
VRK3-210ENST00000596121 NELFEP18615 380 aaKnown RBP10.81□□□□□ -0.68
VRK3-210ENST00000596121 PRDX3P30048 256 aaKnown RBP10.81□□□□□ -0.68
VRK3-210ENST00000596121 BDKRB1P46663 353 aa10.81□□□□□ -0.68
VRK3-210ENST00000596121 PLTPP55058 493 aa10.81□□□□□ -0.68
VRK3-210ENST00000596121 TLE3Q04726 772 aa10.81□□□□□ -0.68
VRK3-210ENST00000596121 FRG1Q14331 258 aaKnown RBP10.81□□□□□ -0.68
VRK3-210ENST00000596121 KYNUQ16719 465 aa10.81□□□□□ -0.68
VRK3-210ENST00000596121 WHAMMP3Q1A5X7 153 aa10.81□□□□□ -0.68
VRK3-210ENST00000596121 COL28A1Q2UY09 1125 aa10.81□□□□□ -0.68
VRK3-210ENST00000596121 DNTTIP2Q5QJE6 756 aaKnown RBP10.81□□□□□ -0.68
VRK3-210ENST00000596121 RBM20Q5T481 1227 aaKnown RBP10.81□□□□□ -0.68
VRK3-210ENST00000596121 CYHR1Q6ZMK1 362 aa10.81□□□□□ -0.68
VRK3-210ENST00000596121 OTOAQ7RTW8 1153 aa10.81□□□□□ -0.68
VRK3-210ENST00000596121 TRIM73Q86UV7 250 aa10.81□□□□□ -0.68
VRK3-210ENST00000596121 OOSP2Q86WS3 158 aa10.81□□□□□ -0.68
VRK3-210ENST00000596121 DTX1Q86Y01 620 aa10.81□□□□□ -0.68
VRK3-210ENST00000596121 LMNTD2Q8IXW0 634 aa10.81□□□□□ -0.68
VRK3-210ENST00000596121 ZBTB2Q8N680 514 aa10.81□□□□□ -0.68
VRK3-210ENST00000596121 LINC01555Q8NAE3 123 aa10.81□□□□□ -0.68
VRK3-210ENST00000596121 ZNF248Q8NDW4 579 aa10.81□□□□□ -0.68
VRK3-210ENST00000596121 FBXO25Q8TCJ0 367 aa10.81□□□□□ -0.68
VRK3-210ENST00000596121 LRRC39Q96DD0 335 aa10.81□□□□□ -0.68
VRK3-210ENST00000596121 NDNQ99608 321 aa10.81□□□□□ -0.68
VRK3-210ENST00000596121 FAM167BQ9BTA0 163 aa10.81□□□□□ -0.68
VRK3-210ENST00000596121 NAT9Q9BTE0 207 aa10.81□□□□□ -0.68
VRK3-210ENST00000596121 AARSD1Q9BTE6 412 aaKnown RBP10.81□□□□□ -0.68
VRK3-210ENST00000596121 FBXO8Q9NRD0 319 aa10.81□□□□□ -0.68
VRK3-210ENST00000596121 SMYD2Q9NRG4 433 aa10.81□□□□□ -0.68
VRK3-210ENST00000596121 MOCS1Q9NZB8 636 aa10.81□□□□□ -0.68
VRK3-210ENST00000596121 AKAP7Q9P0M2 348 aaPredicted RBP10.81□□□□□ -0.68
VRK3-210ENST00000596121 POMT2Q9UKY4 750 aa10.81□□□□□ -0.68
VRK3-210ENST00000596121 PSAT1Q9Y617 370 aa10.81□□□□□ -0.68
VRK3-210ENST00000596121 GSAPA4D1B5 854 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 TLCD2A6NGC4 264 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 F8W8V4 182 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 H3BMM5 538 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 KLK10O43240 276 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 MATN4O95460 622 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 C1orf105O95561 183 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 C1QAP02745 245 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 EBLN1P0CF75 366 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 ZNF28P17035 718 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 WT1P19544 449 aaPredicted RBP10.8□□□□□ -0.68
VRK3-210ENST00000596121 PKLRP30613 574 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 CDKN2DP55273 166 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 CKAP4Q07065 602 aaKnown RBP10.8□□□□□ -0.68
VRK3-210ENST00000596121 CUL1Q13616 776 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 TMED2Q15363 201 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.8□□□□□ -0.68
VRK3-210ENST00000596121 KLHL35Q6PF15 583 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 UNC5DQ6UXZ4 953 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 CAPN12Q6ZSI9 719 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 TIPARPQ7Z3E1 657 aaKnown RBP10.8□□□□□ -0.68
VRK3-210ENST00000596121 RASGRP3Q8IV61 690 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 FAM20CQ8IXL6 584 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 ZBED8Q8IZ13 594 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 D2HGDHQ8N465 521 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 MMGT1Q8N4V1 131 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 C2orf73Q8N5S3 287 aaPredicted RBP10.8□□□□□ -0.68
VRK3-210ENST00000596121 BBOF1Q8ND07 529 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 CD200R1Q8TD46 325 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 CALML6Q8TD86 181 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 DENND1AQ8TEH3 1009 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 KCNE4Q8WWG9 221 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 SEC14L1Q92503 715 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 UBXN4Q92575 508 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 ELMO2Q96JJ3 720 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 OR2A14Q96R47 310 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 OR6C1Q96RD1 312 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 GPR21Q99679 349 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 DDA1Q9BW61 102 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 PITPNM3Q9BZ71 974 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 B3GNT4Q9C0J1 378 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 KLHL25Q9H0H3 589 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 SAYSD1Q9NPB0 183 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 ZDHHC18Q9NUE0 388 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 ACTR10Q9NZ32 417 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 POLG2Q9UHN1 485 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 DMGDHQ9UI17 866 aaKnown RBP10.8□□□□□ -0.68
VRK3-210ENST00000596121 RALYQ9UKM9 306 aaKnown RBP10.8□□□□□ -0.68
VRK3-210ENST00000596121 VPS9D1Q9Y2B5 631 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 DHRS7Q9Y394 339 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 ADAMTS20P59510 1910 aa10.8□□□□□ -0.68
VRK3-210ENST00000596121 MGAQ8IWI9 3026 aa10.79□□□□□ -0.68
VRK3-210ENST00000596121 NBEAQ8NFP9 2946 aa10.79□□□□□ -0.68
VRK3-210ENST00000596121 TEX51A0A1B0GUA7 166 aa10.79□□□□□ -0.68
VRK3-210ENST00000596121 KPNA5O15131 536 aa10.79□□□□□ -0.68
VRK3-210ENST00000596121 POLR1CO15160 346 aaPredicted RBP10.79□□□□□ -0.68
VRK3-210ENST00000596121 PFDN6O15212 129 aa10.79□□□□□ -0.68
VRK3-210ENST00000596121 HCRTR1O43613 425 aa10.79□□□□□ -0.68
VRK3-210ENST00000596121 TIAF1O95411 115 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms