RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.62□□□□□ -0.87
LIG1-209ENST00000596104 PTERQ96BW5 349 aa9.62□□□□□ -0.87
LIG1-209ENST00000596104 OR2A14Q96R47 310 aa9.62□□□□□ -0.87
LIG1-209ENST00000596104 AP1M1Q9BXS5 423 aa9.62□□□□□ -0.87
LIG1-209ENST00000596104 C10orf88Q9H8K7 445 aa9.62□□□□□ -0.87
LIG1-209ENST00000596104 SPHK1Q9NYA1 384 aa9.62□□□□□ -0.87
LIG1-209ENST00000596104 ZDHHC3Q9NYG2 299 aa9.62□□□□□ -0.87
LIG1-209ENST00000596104 SRPK3Q9UPE1 567 aa9.62□□□□□ -0.87
LIG1-209ENST00000596104 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.62□□□□□ -0.873e-7■□□□□ 10.8
LIG1-209ENST00000596104 CRYBG3Q68DQ2 2970 aa9.62□□□□□ -0.87
LIG1-209ENST00000596104 AGPSO00116 658 aa9.61□□□□□ -0.87
LIG1-209ENST00000596104 CRTAMO95727 393 aa9.61□□□□□ -0.87
LIG1-209ENST00000596104 CHRM5P08912 532 aaPredicted RBP9.61□□□□□ -0.87
LIG1-209ENST00000596104 PRSS56P0CW18 603 aa9.61□□□□□ -0.87
LIG1-209ENST00000596104 TPBGLP0DKB5 382 aa9.61□□□□□ -0.87
LIG1-209ENST00000596104 PRF1P14222 555 aa9.61□□□□□ -0.87
LIG1-209ENST00000596104 ITGAXP20702 1163 aa9.61□□□□□ -0.87
LIG1-209ENST00000596104 PSMB4P28070 264 aa9.61□□□□□ -0.87
LIG1-209ENST00000596104 ACADLP28330 430 aa9.61□□□□□ -0.87
LIG1-209ENST00000596104 SHMT2P34897 504 aa9.61□□□□□ -0.87
LIG1-209ENST00000596104 MARCKSL1P49006 195 aa9.61□□□□□ -0.87
LIG1-209ENST00000596104 TMPRSS15P98073 1019 aa9.61□□□□□ -0.87
LIG1-209ENST00000596104 SLC9A5Q14940 896 aa9.61□□□□□ -0.87
LIG1-209ENST00000596104 HIF1AQ16665 826 aa9.61□□□□□ -0.87
LIG1-209ENST00000596104 CYP2A13Q16696 494 aa9.61□□□□□ -0.87
LIG1-209ENST00000596104 GPR33Q49SQ1 333 aa9.61□□□□□ -0.87
LIG1-209ENST00000596104 ITPRIPL1Q6GPH6 555 aa9.61□□□□□ -0.87
LIG1-209ENST00000596104 IGFL2Q6UWQ7 119 aa9.61□□□□□ -0.87
LIG1-209ENST00000596104 UNC5AQ6ZN44 842 aa9.61□□□□□ -0.87
LIG1-209ENST00000596104 BBS12Q6ZW61 710 aa9.61□□□□□ -0.87
LIG1-209ENST00000596104 SERPINA9Q86WD7 417 aa9.61□□□□□ -0.87
LIG1-209ENST00000596104 KLHDC8BQ8IXV7 354 aa9.61□□□□□ -0.87
LIG1-209ENST00000596104 KATNAL2Q8IYT4 538 aa9.61□□□□□ -0.87
LIG1-209ENST00000596104 DNAJC22Q8N4W6 341 aa9.61□□□□□ -0.87
LIG1-209ENST00000596104 CLDN19Q8N6F1 224 aa9.61□□□□□ -0.87
LIG1-209ENST00000596104 ZNF655Q8N720 491 aaPredicted RBP9.61□□□□□ -0.87
LIG1-209ENST00000596104 OR5AR1Q8NGP9 310 aa9.61□□□□□ -0.87
LIG1-209ENST00000596104 PPP4R1Q8TF05 950 aa9.61□□□□□ -0.87
LIG1-209ENST00000596104 N4BP2L2Q92802 583 aaPredicted RBP9.61□□□□□ -0.87
LIG1-209ENST00000596104 WDR77Q9BQA1 342 aaPredicted RBP9.61□□□□□ -0.87
LIG1-209ENST00000596104 GOLPH3Q9H4A6 298 aa9.61□□□□□ -0.87
LIG1-209ENST00000596104 ARNT2Q9HBZ2 717 aa9.61□□□□□ -0.87
LIG1-209ENST00000596104 ATP13A2Q9NQ11 1180 aa9.61□□□□□ -0.87
LIG1-209ENST00000596104 AGPAT4Q9NRZ5 378 aa9.61□□□□□ -0.87
LIG1-209ENST00000596104 NDOR1Q9UHB4 597 aa9.61□□□□□ -0.87
LIG1-209ENST00000596104 GPN3Q9UHW5 284 aaPredicted RBP9.61□□□□□ -0.87
LIG1-209ENST00000596104 FBXL4Q9UKA2 621 aa9.61□□□□□ -0.87
LIG1-209ENST00000596104 NOVA2Q9UNW9 492 aaKnown RBP9.61□□□□□ -0.87
LIG1-209ENST00000596104 ALG6Q9Y672 507 aa9.61□□□□□ -0.87
LIG1-209ENST00000596104 ANKRD17O75179 2603 aaKnown RBP9.6□□□□□ -0.87
LIG1-209ENST00000596104 A0A0J9YY10 115 aa9.6□□□□□ -0.87
LIG1-209ENST00000596104 H7C0S8 307 aa9.6□□□□□ -0.87
LIG1-209ENST00000596104 APOC4-APOC2K7ER74 178 aa9.6□□□□□ -0.87
LIG1-209ENST00000596104 LRRTM2O43300 516 aa9.6□□□□□ -0.87
LIG1-209ENST00000596104 ZRANB2O95218 330 aaKnown RBP eCLIP9.6□□□□□ -0.87
LIG1-209ENST00000596104 ONECUT2O95948 504 aa9.6□□□□□ -0.87
LIG1-209ENST00000596104 APOC2P02655 101 aa9.6□□□□□ -0.87
LIG1-209ENST00000596104 GSTM1P09488 218 aa9.6□□□□□ -0.87
LIG1-209ENST00000596104 ATXN8OSP0DMR3 200 aa9.6□□□□□ -0.87
LIG1-209ENST00000596104 POU3F2P20265 443 aaPredicted RBP9.6□□□□□ -0.87
LIG1-209ENST00000596104 MMP11P24347 488 aa9.6□□□□□ -0.87
LIG1-209ENST00000596104 ACRV1P26436 265 aa9.6□□□□□ -0.87
LIG1-209ENST00000596104 PEBP1P30086 187 aaKnown RBP9.6□□□□□ -0.87
LIG1-209ENST00000596104 MC4RP32245 332 aa9.6□□□□□ -0.87
LIG1-209ENST00000596104 TSFMP43897 325 aaKnown RBP9.6□□□□□ -0.87
LIG1-209ENST00000596104 HADHBP55084 474 aaKnown RBP9.6□□□□□ -0.87
LIG1-209ENST00000596104 GSTM4Q03013 218 aa9.6□□□□□ -0.87
LIG1-209ENST00000596104 AIMP2Q13155 320 aaKnown RBP9.6□□□□□ -0.87
LIG1-209ENST00000596104 ZRSR2Q15696 482 aaKnown RBP9.6□□□□□ -0.87
LIG1-209ENST00000596104 TLDC1Q6P9B6 456 aa9.6□□□□□ -0.87
LIG1-209ENST00000596104 HOOK3Q86VS8 718 aa9.6□□□□□ -0.87
LIG1-209ENST00000596104 PIANPQ8IYJ0 282 aa9.6□□□□□ -0.87
LIG1-209ENST00000596104 RCOR2Q8IZ40 523 aa9.6□□□□□ -0.87
LIG1-209ENST00000596104 GRHL3Q8TE85 626 aa9.6□□□□□ -0.87
LIG1-209ENST00000596104 NACC2Q96BF6 587 aa9.6□□□□□ -0.87
LIG1-209ENST00000596104 DNAJC1Q96KC8 554 aaKnown RBP9.6□□□□□ -0.87
LIG1-209ENST00000596104 CCDC42Q96M95 316 aa9.6□□□□□ -0.87
LIG1-209ENST00000596104 VPS37BQ9H9H4 285 aa9.6□□□□□ -0.87
LIG1-209ENST00000596104 NHEJ1Q9H9Q4 299 aaPredicted RBP9.6□□□□□ -0.87
LIG1-209ENST00000596104 SLC6A20Q9NP91 592 aa9.6□□□□□ -0.87
LIG1-209ENST00000596104 ABHD10Q9NUJ1 306 aa9.6□□□□□ -0.87
LIG1-209ENST00000596104 TXLNGQ9NUQ3 528 aa9.6□□□□□ -0.87
LIG1-209ENST00000596104 ZNHIT6Q9NWK9 470 aaKnown RBP9.6□□□□□ -0.87
LIG1-209ENST00000596104 OR6C2Q9NZP2 312 aa9.6□□□□□ -0.87
LIG1-209ENST00000596104 INTUQ9ULD6 942 aa9.6□□□□□ -0.87
LIG1-209ENST00000596104 ENTPD4Q9Y227 616 aa9.6□□□□□ -0.87
LIG1-209ENST00000596104 AAR2Q9Y312 384 aaKnown RBP9.6□□□□□ -0.87
LIG1-209ENST00000596104 SYCE3A1L190 88 aa9.59□□□□□ -0.87
LIG1-209ENST00000596104 GOLGA6L19H0YKK7 550 aa9.59□□□□□ -0.87
LIG1-209ENST00000596104 H7C0C1 242 aa9.59□□□□□ -0.87
LIG1-209ENST00000596104 SOCS6O14544 535 aa9.59□□□□□ -0.87
LIG1-209ENST00000596104 LIN7AO14910 233 aaPredicted RBP9.59□□□□□ -0.87
LIG1-209ENST00000596104 HNRNPRO43390 633 aaKnown RBP9.59□□□□□ -0.87
LIG1-209ENST00000596104 ZG16O60844 167 aa9.59□□□□□ -0.87
LIG1-209ENST00000596104 ALOX12BO75342 701 aa9.59□□□□□ -0.87
LIG1-209ENST00000596104 AP2A2O94973 939 aa9.59□□□□□ -0.87
LIG1-209ENST00000596104 ITGA3P26006 1051 aa9.59□□□□□ -0.87
LIG1-209ENST00000596104 ELAVL4P26378 380 aaKnown RBP9.59□□□□□ -0.87
LIG1-209ENST00000596104 ANP32AP39687 249 aaKnown RBP9.59□□□□□ -0.87
LIG1-209ENST00000596104 ATP5OP48047 213 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms