RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 PRDX3P30048 256 aaKnown RBP10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 PEBP1P30086 187 aaKnown RBP10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 CXADRP78310 365 aa10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 MPP1Q00013 466 aa10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 FOXM1Q08050 763 aa10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 ABRQ12979 859 aa10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 THOC5Q13769 683 aaKnown RBP10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 TMED2Q15363 201 aa10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 BBS9Q3SYG4 887 aa10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 HSP90AA5PQ58FG0 334 aa10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 DNAJC21Q5F1R6 531 aaKnown RBP10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 HP1BP3Q5SSJ5 553 aaPredicted RBP10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 PLEKHS1Q5SXH7 462 aa10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 BROXQ5VW32 411 aa10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 UNC5AQ6ZN44 842 aa10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 OTOAQ7RTW8 1153 aa10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 KCNMB4Q86W47 210 aa10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 KMT5CQ86Y97 462 aa10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 D2HGDHQ8N465 521 aa10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 LMNTD1Q8N9Z9 388 aa10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 GIMAP7Q8NHV1 300 aa10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 SNRNP27Q8WVK2 155 aaKnown RBP10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 SNF8Q96H20 258 aa10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 CCNL2Q96S94 520 aaPredicted RBP10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 SLC30A3Q99726 388 aa10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 LATS2Q9NRM7 1088 aa10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 SPHK1Q9NYA1 384 aa10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 SLC17A6Q9P2U8 582 aa10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 CIDEBQ9UHD4 219 aa10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 POLG2Q9UHN1 485 aa10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 BTRCQ9Y297 605 aa10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 TDRKHQ9Y2W6 561 aaKnown RBP10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 TMEM184BQ9Y519 407 aaPredicted RBP10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 TEX264Q9Y6I9 313 aa10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 BSNQ9UPA5 3926 aa10.65□□□□□ -0.7
SHKBP1-206ENST00000595523 SLC9B1P1A6NJY1 282 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 EFCAB8A8MWE9 144 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 H3BMM5 538 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 K7ENP7 123 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 MATN2O00339 956 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 RAD51CO43502 376 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 STK17BO94768 372 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 HAUS5O94927 633 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 ZBTB11O95625 1053 aaPredicted RBP10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 CHRM5P08912 532 aaPredicted RBP10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 ERVK-10P10266 1014 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 PVRP15151 417 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 ST6GAL1P15907 406 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 GABRB3P28472 473 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 PKLRP30613 574 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 SHMT2P34897 504 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 ELK3P41970 407 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 CLCN7P51798 805 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 UCNP55089 124 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 HSD11B2P80365 405 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 VAC14Q08AM6 782 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 PRKAA1Q13131 559 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 TUBB3Q13509 450 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 IL11RAQ14626 422 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 FASTKD3Q14CZ7 662 aaKnown RBP10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 GPR19Q15760 415 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 HIF1AQ16665 826 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 CCSMST1Q4G0I0 132 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 ACSBG2Q5FVE4 666 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 ARHGAP40Q5TG30 622 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 ARMC6Q6NXE6 501 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 INO80CQ6PI98 192 aaPredicted RBP10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 CNSTQ6PJW8 725 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 UNC5DQ6UXZ4 953 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 ZNF572Q7Z3I7 529 aaPredicted RBP10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 TRIM73Q86UV7 250 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 LMNTD2Q8IXW0 634 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 PDIK1LQ8N165 341 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 CARFQ8N187 725 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 LINC01555Q8NAE3 123 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 SIDT2Q8NBJ9 832 aaKnown RBP10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 CFAP61Q8NHU2 1237 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 ELMO2Q96JJ3 720 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 C16orf45Q96MC5 204 aaPredicted RBP10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 BBC3Q96PG8 261 aaPredicted RBP10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 OR2A14Q96R47 310 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 ZPBPQ9BS86 351 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 C1GALT1Q9NS00 363 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 FGF21Q9NSA1 209 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 IARS2Q9NSE4 1012 aaKnown RBP10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 ACTR10Q9NZ32 417 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 FBXO5Q9UKT4 447 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 CHMP2BQ9UQN3 213 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 SNX24Q9Y343 169 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 SPTA1P02549 2419 aa10.64□□□□□ -0.71
SHKBP1-206ENST00000595523 FASNP49327 2511 aaKnown RBP10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 PIPSLA2A3N6 862 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 C2orf74A8MZ97 194 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 E7ESA3 106 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 SMAPO00193 183 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 KPNA5O15131 536 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 PFDN6O15212 129 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 RAD1O60671 282 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 MATN4O95460 622 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 TTC4O95801 387 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms