RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 GIMAP7Q8NHV1 300 aa14.13□□□□□ -0.15
VRK3-206ENST00000594090 FBXO25Q8TCJ0 367 aa14.13□□□□□ -0.15
VRK3-206ENST00000594090 SKA2Q8WVK7 121 aaPredicted RBP14.13□□□□□ -0.15
VRK3-206ENST00000594090 KCNE4Q8WWG9 221 aa14.13□□□□□ -0.15
VRK3-206ENST00000594090 NAF1Q96HR8 494 aaKnown RBP14.13□□□□□ -0.15
VRK3-206ENST00000594090 SLC30A3Q99726 388 aa14.13□□□□□ -0.15
VRK3-206ENST00000594090 AARSD1Q9BTE6 412 aaKnown RBP14.13□□□□□ -0.15
VRK3-206ENST00000594090 LRRC1Q9BTT6 524 aa14.13□□□□□ -0.15
VRK3-206ENST00000594090 PHACTR1Q9C0D0 580 aa14.13□□□□□ -0.15
VRK3-206ENST00000594090 FBXO8Q9NRD0 319 aa14.13□□□□□ -0.15
VRK3-206ENST00000594090 KLHL42Q9P2K6 505 aa14.13□□□□□ -0.15
VRK3-206ENST00000594090 TSR3Q9UJK0 312 aaKnown RBP14.13□□□□□ -0.15
VRK3-206ENST00000594090 RUVBL2Q9Y230 463 aaKnown RBP14.13□□□□□ -0.15
VRK3-206ENST00000594090 B3GALT1Q9Y5Z6 326 aa14.13□□□□□ -0.15
VRK3-206ENST00000594090 NFS1Q9Y697 457 aa14.13□□□□□ -0.15
VRK3-206ENST00000594090 NELFEP18615 380 aaKnown RBP14.12□□□□□ -0.15
VRK3-206ENST00000594090 GABRB3P28472 473 aa14.12□□□□□ -0.15
VRK3-206ENST00000594090 SH3BP2P78314 561 aa14.12□□□□□ -0.15
VRK3-206ENST00000594090 TRADDQ15628 312 aa14.12□□□□□ -0.15
VRK3-206ENST00000594090 KYNUQ16719 465 aa14.12□□□□□ -0.15
VRK3-206ENST00000594090 TTLL9Q3SXZ7 439 aa14.12□□□□□ -0.15
VRK3-206ENST00000594090 ACSBG2Q5FVE4 666 aa14.12□□□□□ -0.15
VRK3-206ENST00000594090 DCAF12Q5T6F0 453 aa14.12□□□□□ -0.15
VRK3-206ENST00000594090 ANKS6Q68DC2 871 aa14.12□□□□□ -0.15
VRK3-206ENST00000594090 ZDHHC24Q6UX98 284 aa14.12□□□□□ -0.15
VRK3-206ENST00000594090 LRRC69Q6ZNQ3 347 aa14.12□□□□□ -0.15
VRK3-206ENST00000594090 KMT5CQ86Y97 462 aa14.12□□□□□ -0.15
VRK3-206ENST00000594090 CARFQ8N187 725 aa14.12□□□□□ -0.15
VRK3-206ENST00000594090 MMGT1Q8N4V1 131 aa14.12□□□□□ -0.15
VRK3-206ENST00000594090 SIDT2Q8NBJ9 832 aaKnown RBP14.12□□□□□ -0.15
VRK3-206ENST00000594090 NOA1Q8NC60 698 aaKnown RBP14.12□□□□□ -0.15
VRK3-206ENST00000594090 CD200R1Q8TD46 325 aa14.12□□□□□ -0.15
VRK3-206ENST00000594090 SEC14L1Q92503 715 aa14.12□□□□□ -0.15
VRK3-206ENST00000594090 PPM1MQ96MI6 270 aa14.12□□□□□ -0.15
VRK3-206ENST00000594090 FOPNLQ96NB1 174 aa14.12□□□□□ -0.15
VRK3-206ENST00000594090 NDNQ99608 321 aa14.12□□□□□ -0.15
VRK3-206ENST00000594090 GPR21Q99679 349 aa14.12□□□□□ -0.15
VRK3-206ENST00000594090 MENTQ9BUN1 341 aa14.12□□□□□ -0.15
VRK3-206ENST00000594090 APMAPQ9HDC9 416 aa14.12□□□□□ -0.15
VRK3-206ENST00000594090 SAYSD1Q9NPB0 183 aa14.12□□□□□ -0.15
VRK3-206ENST00000594090 MOCS1Q9NZB8 636 aa14.12□□□□□ -0.15
VRK3-206ENST00000594090 OR6C2Q9NZP2 312 aa14.12□□□□□ -0.15
VRK3-206ENST00000594090 DHRS7Q9Y394 339 aa14.12□□□□□ -0.15
VRK3-206ENST00000594090 APC2O95996 2303 aa14.12□□□□□ -0.15
VRK3-206ENST00000594090 USP24Q9UPU5 2620 aa14.11□□□□□ -0.15
VRK3-206ENST00000594090 ESYT3A0FGR9 886 aa14.11□□□□□ -0.15
VRK3-206ENST00000594090 PIPSLA2A3N6 862 aa14.11□□□□□ -0.15
VRK3-206ENST00000594090 CTAGE15A4D2H0 777 aa14.11□□□□□ -0.15
VRK3-206ENST00000594090 C2orf74A8MZ97 194 aa14.11□□□□□ -0.15
VRK3-206ENST00000594090 MATN4O95460 622 aa14.11□□□□□ -0.15
VRK3-206ENST00000594090 C1orf105O95561 183 aa14.11□□□□□ -0.15
VRK3-206ENST00000594090 AHSGP02765 367 aa14.11□□□□□ -0.15
VRK3-206ENST00000594090 CTAGE8P0CG41 777 aa14.11□□□□□ -0.15
VRK3-206ENST00000594090 CDH3P22223 829 aa14.11□□□□□ -0.15
VRK3-206ENST00000594090 CD82P27701 267 aa14.11□□□□□ -0.15
VRK3-206ENST00000594090 PRDX3P30048 256 aaKnown RBP14.11□□□□□ -0.15
VRK3-206ENST00000594090 PKLRP30613 574 aa14.11□□□□□ -0.15
VRK3-206ENST00000594090 BDKRB1P46663 353 aa14.11□□□□□ -0.15
VRK3-206ENST00000594090 MGAT5Q09328 741 aa14.11□□□□□ -0.15
VRK3-206ENST00000594090 CUL1Q13616 776 aa14.11□□□□□ -0.15
VRK3-206ENST00000594090 GRB7Q14451 532 aa14.11□□□□□ -0.15
VRK3-206ENST00000594090 KLHL38Q2WGJ6 581 aa14.11□□□□□ -0.15
VRK3-206ENST00000594090 CEACAM20Q6UY09 585 aa14.11□□□□□ -0.15
VRK3-206ENST00000594090 CAPN12Q6ZSI9 719 aa14.11□□□□□ -0.15
VRK3-206ENST00000594090 CTAGE6Q86UF2 777 aa14.11□□□□□ -0.15
VRK3-206ENST00000594090 CTAGE4Q8IX94 777 aa14.11□□□□□ -0.15
VRK3-206ENST00000594090 SPACA3Q8IXA5 215 aa14.11□□□□□ -0.15
VRK3-206ENST00000594090 PYROXD1Q8WU10 500 aa14.11□□□□□ -0.15
VRK3-206ENST00000594090 SLC41A2Q96JW4 573 aa14.11□□□□□ -0.15
VRK3-206ENST00000594090 TEFMQ96QE5 360 aaKnown RBP14.11□□□□□ -0.15
VRK3-206ENST00000594090 OR6C1Q96RD1 312 aa14.11□□□□□ -0.15
VRK3-206ENST00000594090 CTRCQ99895 268 aa14.11□□□□□ -0.15
VRK3-206ENST00000594090 ASPSCR1Q9BZE9 553 aa14.11□□□□□ -0.15
VRK3-206ENST00000594090 DPH1Q9BZG8 443 aa14.11□□□□□ -0.15
VRK3-206ENST00000594090 TWSG1Q9GZX9 223 aa14.11□□□□□ -0.15
VRK3-206ENST00000594090 ACTR10Q9NZ32 417 aa14.11□□□□□ -0.15
VRK3-206ENST00000594090 ZFATQ9P243 1243 aa14.11□□□□□ -0.15
VRK3-206ENST00000594090 CIDEBQ9UHD4 219 aa14.11□□□□□ -0.15
VRK3-206ENST00000594090 POLR1CO15160 346 aaPredicted RBP14.1□□□□□ -0.15
VRK3-206ENST00000594090 VPS26AO75436 327 aa14.1□□□□□ -0.15
VRK3-206ENST00000594090 ZBTB11O95625 1053 aaPredicted RBP14.1□□□□□ -0.15
VRK3-206ENST00000594090 CHRM5P08912 532 aaPredicted RBP14.1□□□□□ -0.15
VRK3-206ENST00000594090 LIPCP11150 499 aa14.1□□□□□ -0.15
VRK3-206ENST00000594090 ITPKBP27987 946 aa14.1□□□□□ -0.15
VRK3-206ENST00000594090 ABCG1P45844 678 aa14.1□□□□□ -0.15
VRK3-206ENST00000594090 RAB28P51157 221 aa14.1□□□□□ -0.15
VRK3-206ENST00000594090 FOXM1Q08050 763 aa14.1□□□□□ -0.15
VRK3-206ENST00000594090 CLN3Q13286 438 aa14.1□□□□□ -0.15
VRK3-206ENST00000594090 RBM20Q5T481 1227 aaKnown RBP14.1□□□□□ -0.15
VRK3-206ENST00000594090 TTC23LQ6PF05 361 aa14.1□□□□□ -0.15
VRK3-206ENST00000594090 FBXO38Q6PIJ6 1188 aa14.1□□□□□ -0.15
VRK3-206ENST00000594090 NEK10Q6ZWH5 1172 aa14.1□□□□□ -0.15
VRK3-206ENST00000594090 ZFAND4Q86XD8 727 aa14.1□□□□□ -0.15
VRK3-206ENST00000594090 SPNS2Q8IVW8 549 aa14.1□□□□□ -0.15
VRK3-206ENST00000594090 RAD51AP1Q96B01 352 aa14.1□□□□□ -0.15
VRK3-206ENST00000594090 ZPBPQ9BS86 351 aa14.1□□□□□ -0.15
VRK3-206ENST00000594090 PITPNM3Q9BZ71 974 aa14.1□□□□□ -0.15
VRK3-206ENST00000594090 C1GALT1Q9NS00 363 aa14.1□□□□□ -0.15
VRK3-206ENST00000594090 CORO1CQ9ULV4 474 aaPredicted RBP14.1□□□□□ -0.15
VRK3-206ENST00000594090 PCDHB11Q9Y5F2 797 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms