RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 PCM1Q15154 2024 aa15.8■□□□□ 0.12
LIG1-205ENST00000593425 SPTBN1Q01082 2364 aaKnown RBP15.79■□□□□ 0.12
LIG1-205ENST00000593425 OR2B3O76000 313 aa15.79■□□□□ 0.12
LIG1-205ENST00000593425 STK10O94804 968 aaKnown RBP15.79■□□□□ 0.12
LIG1-205ENST00000593425 DDAH2O95865 285 aa15.79■□□□□ 0.12
LIG1-205ENST00000593425 TPH1P17752 444 aa15.79■□□□□ 0.12
LIG1-205ENST00000593425 CTNNA2P26232 953 aa15.79■□□□□ 0.12
LIG1-205ENST00000593425 COL8A1P27658 744 aa15.79■□□□□ 0.12
LIG1-205ENST00000593425 PTPN7P35236 360 aa15.79■□□□□ 0.12
LIG1-205ENST00000593425 SSPNQ14714 243 aa15.79■□□□□ 0.12
LIG1-205ENST00000593425 SLC9A5Q14940 896 aa15.79■□□□□ 0.12
LIG1-205ENST00000593425 DCAF10Q5QP82 559 aa15.79■□□□□ 0.12
LIG1-205ENST00000593425 KCTD11Q693B1 232 aa15.79■□□□□ 0.12
LIG1-205ENST00000593425 RHBDD2Q6NTF9 364 aa15.79■□□□□ 0.12
LIG1-205ENST00000593425 ZNF449Q6P9G9 518 aa15.79■□□□□ 0.12
LIG1-205ENST00000593425 RNF214Q8ND24 703 aa15.79■□□□□ 0.12
LIG1-205ENST00000593425 N4BP2L2Q92802 583 aaPredicted RBP15.79■□□□□ 0.12
LIG1-205ENST00000593425 INPP5DQ92835 1189 aa15.79■□□□□ 0.12
LIG1-205ENST00000593425 DHCR7Q9UBM7 475 aaKnown RBP15.79■□□□□ 0.12
LIG1-205ENST00000593425 FEZ2Q9UHY8 353 aaPredicted RBP15.79■□□□□ 0.12
LIG1-205ENST00000593425 CDYLQ9Y232 598 aa15.79■□□□□ 0.12
LIG1-205ENST00000593425 EFR3BQ9Y2G0 817 aa15.79■□□□□ 0.12
LIG1-205ENST00000593425 CLDN1O95832 211 aa15.78■□□□□ 0.12
LIG1-205ENST00000593425 CHRM5P08912 532 aaPredicted RBP15.78■□□□□ 0.12
LIG1-205ENST00000593425 VARSP26640 1264 aaKnown RBP15.78■□□□□ 0.12
LIG1-205ENST00000593425 ACADLP28330 430 aa15.78■□□□□ 0.12
LIG1-205ENST00000593425 PEBP1P30086 187 aaKnown RBP15.78■□□□□ 0.12
LIG1-205ENST00000593425 SHMT2P34897 504 aa15.78■□□□□ 0.12
LIG1-205ENST00000593425 FOLR3P41439 243 aa15.78■□□□□ 0.12
LIG1-205ENST00000593425 CACNG1Q06432 222 aa15.78■□□□□ 0.12
LIG1-205ENST00000593425 MYBPC3Q14896 1274 aa15.78■□□□□ 0.12
LIG1-205ENST00000593425 BRD3Q15059 726 aa15.78■□□□□ 0.12
LIG1-205ENST00000593425 ZNF787Q6DD87 383 aa15.78■□□□□ 0.12
LIG1-205ENST00000593425 NAPRTQ6XQN6 538 aa15.78■□□□□ 0.12
LIG1-205ENST00000593425 HOOK3Q86VS8 718 aa15.78■□□□□ 0.12
LIG1-205ENST00000593425 IQCKQ8N0W5 287 aa15.78■□□□□ 0.12
LIG1-205ENST00000593425 GALNT16Q8N428 558 aa15.78■□□□□ 0.12
LIG1-205ENST00000593425 CISD2Q8N5K1 135 aaKnown RBP15.78■□□□□ 0.12
LIG1-205ENST00000593425 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.78■□□□□ 0.12
LIG1-205ENST00000593425 CDKN2AIPNLQ96HQ2 116 aa15.78■□□□□ 0.12
LIG1-205ENST00000593425 FER1L6-AS2Q96M78 137 aa15.78■□□□□ 0.12
LIG1-205ENST00000593425 IP6K3Q96PC2 410 aa15.78■□□□□ 0.12
LIG1-205ENST00000593425 ZNF552Q9H707 407 aaPredicted RBP15.78■□□□□ 0.12
LIG1-205ENST00000593425 PIH1D1Q9NWS0 290 aaKnown RBP15.78■□□□□ 0.12
LIG1-205ENST00000593425 SMARCAL1Q9NZC9 954 aa15.78■□□□□ 0.12
LIG1-205ENST00000593425 GPN3Q9UHW5 284 aaPredicted RBP15.78■□□□□ 0.12
LIG1-205ENST00000593425 PLAGL1Q9UM63 463 aa15.78■□□□□ 0.12
LIG1-205ENST00000593425 ASF1AQ9Y294 204 aa15.78■□□□□ 0.12
LIG1-205ENST00000593425 AP1M2Q9Y6Q5 423 aa15.78■□□□□ 0.12
LIG1-205ENST00000593425 A0A0J9YY10 115 aa15.77■□□□□ 0.12
LIG1-205ENST00000593425 CCDC78A2IDD5 438 aa15.77■□□□□ 0.12
LIG1-205ENST00000593425 RCCD1A6NED2 376 aa15.77■□□□□ 0.12
LIG1-205ENST00000593425 OR51F1A6NGY5 319 aa15.77■□□□□ 0.12
LIG1-205ENST00000593425 LIN7AO14910 233 aaPredicted RBP15.77■□□□□ 0.12
LIG1-205ENST00000593425 ZSCAN9O15535 394 aaPredicted RBP15.77■□□□□ 0.12
LIG1-205ENST00000593425 AP2A2O94973 939 aa15.77■□□□□ 0.12
LIG1-205ENST00000593425 CBX6O95503 412 aa15.77■□□□□ 0.12
LIG1-205ENST00000593425 METTL18O95568 372 aa15.77■□□□□ 0.12
LIG1-205ENST00000593425 LDLRP01130 860 aa15.77■□□□□ 0.12
LIG1-205ENST00000593425 GSTM1P09488 218 aa15.77■□□□□ 0.12
LIG1-205ENST00000593425 DCDP81605 110 aaKnown RBP15.77■□□□□ 0.12
LIG1-205ENST00000593425 GSTM4Q03013 218 aa15.77■□□□□ 0.12
LIG1-205ENST00000593425 POU6F1Q14863 301 aa15.77■□□□□ 0.12
LIG1-205ENST00000593425 MRPL14Q6P1L8 145 aaKnown RBP15.77■□□□□ 0.12
LIG1-205ENST00000593425 PPP1R32Q7Z5V6 425 aa15.77■□□□□ 0.12
LIG1-205ENST00000593425 FAM20CQ8IXL6 584 aa15.77■□□□□ 0.12
LIG1-205ENST00000593425 ZNF655Q8N720 491 aaPredicted RBP15.77■□□□□ 0.12
LIG1-205ENST00000593425 CLEC1AQ8NC01 280 aa15.77■□□□□ 0.12
LIG1-205ENST00000593425 OR2Y1Q8NGV0 311 aa15.77■□□□□ 0.12
LIG1-205ENST00000593425 PROKR1Q8TCW9 393 aa15.77■□□□□ 0.12
LIG1-205ENST00000593425 ELMO1Q92556 727 aa15.77■□□□□ 0.12
LIG1-205ENST00000593425 ALG3Q92685 438 aa15.77■□□□□ 0.12
LIG1-205ENST00000593425 PPP1R2P1Q96PQ5 205 aa15.77■□□□□ 0.12
LIG1-205ENST00000593425 RANBP9Q96S59 729 aa15.77■□□□□ 0.12
LIG1-205ENST00000593425 C17orf62Q9BQA9 187 aa15.77■□□□□ 0.12
LIG1-205ENST00000593425 CHRNA10Q9GZZ6 450 aa15.77■□□□□ 0.12
LIG1-205ENST00000593425 ZBTB20Q9HC78 741 aaPredicted RBP15.77■□□□□ 0.12
LIG1-205ENST00000593425 P4HTMQ9NXG6 502 aa15.77■□□□□ 0.12
LIG1-205ENST00000593425 IFT80Q9P2H3 777 aaPredicted RBP15.77■□□□□ 0.12
LIG1-205ENST00000593425 NDOR1Q9UHB4 597 aa15.77■□□□□ 0.12
LIG1-205ENST00000593425 B3GNT3Q9Y2A9 372 aa15.77■□□□□ 0.12
LIG1-205ENST00000593425 TDRKHQ9Y2W6 561 aaKnown RBP15.77■□□□□ 0.12
LIG1-205ENST00000593425 TEX15Q9BXT5 2789 aa15.77■□□□□ 0.11
LIG1-205ENST00000593425 HIVEP3Q5T1R4 2406 aa15.76■□□□□ 0.11
LIG1-205ENST00000593425 SLC5A10A0PJK1 596 aa15.76■□□□□ 0.11
LIG1-205ENST00000593425 WIPF3A6NGB9 483 aa15.76■□□□□ 0.11
LIG1-205ENST00000593425 PEX12O00623 359 aa15.76■□□□□ 0.11
LIG1-205ENST00000593425 UMODP07911 640 aa15.76■□□□□ 0.11
LIG1-205ENST00000593425 NSG1P42857 185 aa15.76■□□□□ 0.11
LIG1-205ENST00000593425 SPA17Q15506 151 aa15.76■□□□□ 0.11
LIG1-205ENST00000593425 CRB2Q5IJ48 1285 aa15.76■□□□□ 0.11
LIG1-205ENST00000593425 IGFL3Q6UXB1 125 aa15.76■□□□□ 0.11
LIG1-205ENST00000593425 MAMDC2Q7Z304 686 aaPredicted RBP15.76■□□□□ 0.11
LIG1-205ENST00000593425 TBC1D21Q8IYX1 336 aa15.76■□□□□ 0.11
LIG1-205ENST00000593425 DNAJC22Q8N4W6 341 aa15.76■□□□□ 0.11
LIG1-205ENST00000593425 STYXQ8WUJ0 223 aa15.76■□□□□ 0.11
LIG1-205ENST00000593425 TSPY26PQ9H489 355 aa15.76■□□□□ 0.11
LIG1-205ENST00000593425 SLC22A11Q9NSA0 550 aa15.76■□□□□ 0.11
LIG1-205ENST00000593425 NTNG1Q9Y2I2 539 aa15.76■□□□□ 0.11
LIG1-205ENST00000593425 SEC16AO15027 2179 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms