RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 PTGIRP43119 386 aa18.24■□□□□ 0.51
CCDC43-205ENST00000592333 LMAN1P49257 510 aa18.24■□□□□ 0.51
CCDC43-205ENST00000592333 CCL11P51671 97 aa18.24■□□□□ 0.51
CCDC43-205ENST00000592333 GDF10P55107 478 aa18.24■□□□□ 0.51
CCDC43-205ENST00000592333 MLLT10P55197 1068 aa18.24■□□□□ 0.51
CCDC43-205ENST00000592333 PRKG2Q13237 762 aa18.24■□□□□ 0.51
CCDC43-205ENST00000592333 RHBDD2Q6NTF9 364 aa18.24■□□□□ 0.51
CCDC43-205ENST00000592333 UNC5AQ6ZN44 842 aa18.24■□□□□ 0.51
CCDC43-205ENST00000592333 RAB43Q86YS6 212 aa18.24■□□□□ 0.51
CCDC43-205ENST00000592333 C19orf47Q8N9M1 422 aaKnown RBP18.24■□□□□ 0.51
CCDC43-205ENST00000592333 ELMO1Q92556 727 aa18.24■□□□□ 0.51
CCDC43-205ENST00000592333 N4BP2L2Q92802 583 aaPredicted RBP18.24■□□□□ 0.51
CCDC43-205ENST00000592333 NACC2Q96BF6 587 aa18.24■□□□□ 0.51
CCDC43-205ENST00000592333 HGH1Q9BTY7 390 aa18.24■□□□□ 0.51
CCDC43-205ENST00000592333 TSSK1BQ9BXA7 367 aa18.24■□□□□ 0.51
CCDC43-205ENST00000592333 C5AR2Q9P296 337 aa18.24■□□□□ 0.51
CCDC43-205ENST00000592333 SRPK3Q9UPE1 567 aa18.24■□□□□ 0.51
CCDC43-205ENST00000592333 ICKQ9UPZ9 632 aa18.24■□□□□ 0.51
CCDC43-205ENST00000592333 DOPEY2Q9Y3R5 2298 aa18.24■□□□□ 0.51
CCDC43-205ENST00000592333 PIKFYVEQ9Y2I7 2098 aa18.23■□□□□ 0.51
CCDC43-205ENST00000592333 H3BMH7 237 aa18.23■□□□□ 0.51
CCDC43-205ENST00000592333 CHRM5P08912 532 aaPredicted RBP18.23■□□□□ 0.51
CCDC43-205ENST00000592333 GP1BBP13224 206 aa18.23■□□□□ 0.51
CCDC43-205ENST00000592333 ADRA1DP25100 572 aa18.23■□□□□ 0.51
CCDC43-205ENST00000592333 ACVR1Q04771 509 aa18.23■□□□□ 0.51
CCDC43-205ENST00000592333 SSPNQ14714 243 aa18.23■□□□□ 0.51
CCDC43-205ENST00000592333 KIR2DS3Q14952 304 aa18.23■□□□□ 0.51
CCDC43-205ENST00000592333 SLC5A12Q1EHB4 618 aa18.23■□□□□ 0.51
CCDC43-205ENST00000592333 DNAJC21Q5F1R6 531 aaKnown RBP18.23■□□□□ 0.51
CCDC43-205ENST00000592333 PRAMEF17Q5VTA0 474 aa18.23■□□□□ 0.51
CCDC43-205ENST00000592333 CPZQ66K79 652 aa18.23■□□□□ 0.51
CCDC43-205ENST00000592333 LCN10Q6JVE6 187 aa18.23■□□□□ 0.51
CCDC43-205ENST00000592333 TLDC1Q6P9B6 456 aa18.23■□□□□ 0.51
CCDC43-205ENST00000592333 AFTPHQ6ULP2 937 aa18.23■□□□□ 0.51
CCDC43-205ENST00000592333 DNAAF3Q8N9W5 541 aa18.23■□□□□ 0.51
CCDC43-205ENST00000592333 OR5AR1Q8NGP9 310 aa18.23■□□□□ 0.51
CCDC43-205ENST00000592333 CPT1CQ8TCG5 803 aa18.23■□□□□ 0.51
CCDC43-205ENST00000592333 DENND1AQ8TEH3 1009 aa18.23■□□□□ 0.51
CCDC43-205ENST00000592333 OR2A14Q96R47 310 aa18.23■□□□□ 0.51
CCDC43-205ENST00000592333 IMPACTQ9P2X3 320 aa18.23■□□□□ 0.51
CCDC43-205ENST00000592333 A0A0J9YY10 115 aa18.22■□□□□ 0.51
CCDC43-205ENST00000592333 BHMG1C9JSJ3 638 aaPredicted RBP18.22■□□□□ 0.51
CCDC43-205ENST00000592333 OR2B3O76000 313 aa18.22■□□□□ 0.51
CCDC43-205ENST00000592333 SORBS2O94875 1100 aaKnown RBP18.22■□□□□ 0.51
CCDC43-205ENST00000592333 RPN2P04844 631 aa18.22■□□□□ 0.51
CCDC43-205ENST00000592333 UGT2B7P16662 529 aa18.22■□□□□ 0.51
CCDC43-205ENST00000592333 GABRA4P48169 554 aa18.22■□□□□ 0.51
CCDC43-205ENST00000592333 TMEM139Q8IV31 216 aa18.22■□□□□ 0.51
CCDC43-205ENST00000592333 OR13J1Q8NGT2 312 aa18.22■□□□□ 0.51
CCDC43-205ENST00000592333 ASZ1Q8WWH4 475 aa18.22■□□□□ 0.51
CCDC43-205ENST00000592333 SLC22A18Q96BI1 424 aa18.22■□□□□ 0.51
CCDC43-205ENST00000592333 SMAD5Q99717 465 aaKnown RBP18.22■□□□□ 0.51
CCDC43-205ENST00000592333 AP1M1Q9BXS5 423 aa18.22■□□□□ 0.51
CCDC43-205ENST00000592333 XKR8Q9H6D3 395 aa18.22■□□□□ 0.51
CCDC43-205ENST00000592333 R3HDM2Q9Y2K5 976 aaKnown RBP18.22■□□□□ 0.51
CCDC43-205ENST00000592333 MAP4K5Q9Y4K4 846 aa18.22■□□□□ 0.51
CCDC43-205ENST00000592333 PRSS21Q9Y6M0 314 aa18.22■□□□□ 0.51
CCDC43-205ENST00000592333 SEC16AO15027 2179 aa18.22■□□□□ 0.51
CCDC43-205ENST00000592333 CCDC78A2IDD5 438 aa18.21■□□□□ 0.51
CCDC43-205ENST00000592333 CCDC162PA2VCL2 907 aa18.21■□□□□ 0.51
CCDC43-205ENST00000592333 CYSRT1A8MQ03 144 aa18.21■□□□□ 0.51
CCDC43-205ENST00000592333 KLF7O75840 302 aaPredicted RBP18.21■□□□□ 0.51
CCDC43-205ENST00000592333 FKBP9O95302 570 aa18.21■□□□□ 0.51
CCDC43-205ENST00000592333 PRSS56P0CW18 603 aa18.21■□□□□ 0.51
CCDC43-205ENST00000592333 OASLQ15646 514 aaKnown RBP18.21■□□□□ 0.51
CCDC43-205ENST00000592333 SYTL3Q4VX76 610 aa18.21■□□□□ 0.51
CCDC43-205ENST00000592333 AARS2Q5JTZ9 985 aaKnown RBP18.21■□□□□ 0.51
CCDC43-205ENST00000592333 TSTD2Q5T7W7 516 aa18.21■□□□□ 0.51
CCDC43-205ENST00000592333 SLC22A15Q8IZD6 547 aa18.21■□□□□ 0.51
CCDC43-205ENST00000592333 ZBTB2Q8N680 514 aa18.21■□□□□ 0.51
CCDC43-205ENST00000592333 OR52K1Q8NGK4 314 aa18.21■□□□□ 0.51
CCDC43-205ENST00000592333 OR4L1Q8NH43 312 aa18.21■□□□□ 0.51
CCDC43-205ENST00000592333 FLVCR1-AS1Q8TAF5 88 aa18.21■□□□□ 0.51
CCDC43-205ENST00000592333 FER1L6-AS2Q96M78 137 aa18.21■□□□□ 0.51
CCDC43-205ENST00000592333 PSMG3-AS1Q96PY0 264 aa18.21■□□□□ 0.51
CCDC43-205ENST00000592333 CARD6Q9BX69 1037 aa18.21■□□□□ 0.51
CCDC43-205ENST00000592333 ENAMQ9NRM1 1142 aa18.21■□□□□ 0.51
CCDC43-205ENST00000592333 GPR83Q9NYM4 423 aa18.21■□□□□ 0.51
CCDC43-205ENST00000592333 PACSIN2Q9UNF0 486 aaPredicted RBP18.21■□□□□ 0.51
CCDC43-205ENST00000592333 USP9YO00507 2555 aaPredicted RBP18.21■□□□□ 0.51
CCDC43-205ENST00000592333 SPENQ96T58 3664 aaKnown RBP18.2■□□□□ 0.5
CCDC43-205ENST00000592333 AP3B1O00203 1094 aa18.2■□□□□ 0.5
CCDC43-205ENST00000592333 LIASO43766 372 aa18.2■□□□□ 0.5
CCDC43-205ENST00000592333 FTCDO95954 541 aa18.2■□□□□ 0.5
CCDC43-205ENST00000592333 PVRP15151 417 aa18.2■□□□□ 0.5
CCDC43-205ENST00000592333 RAB28P51157 221 aa18.2■□□□□ 0.5
CCDC43-205ENST00000592333 DCDP81605 110 aaKnown RBP18.2■□□□□ 0.5
CCDC43-205ENST00000592333 CHAF1BQ13112 559 aa18.2■□□□□ 0.5
CCDC43-205ENST00000592333 PTCHD3Q3KNS1 767 aa18.2■□□□□ 0.5
CCDC43-205ENST00000592333 SEL1L2Q5TEA6 688 aa18.2■□□□□ 0.5
CCDC43-205ENST00000592333 DNAJC22Q8N4W6 341 aa18.2■□□□□ 0.5
CCDC43-205ENST00000592333 FDCSPQ8NFU4 85 aa18.2■□□□□ 0.5
CCDC43-205ENST00000592333 HDAC10Q969S8 669 aa18.2■□□□□ 0.5
CCDC43-205ENST00000592333 GBP5Q96PP8 586 aa18.2■□□□□ 0.5
CCDC43-205ENST00000592333 RBSNQ9H1K0 784 aa18.2■□□□□ 0.5
CCDC43-205ENST00000592333 ETNK1Q9HBU6 452 aa18.2■□□□□ 0.5
CCDC43-205ENST00000592333 FAM60AQ9NP50 221 aa18.2■□□□□ 0.5
CCDC43-205ENST00000592333 GPN3Q9UHW5 284 aaPredicted RBP18.2■□□□□ 0.5
CCDC43-205ENST00000592333 PLCL2Q9UPR0 1127 aa18.2■□□□□ 0.5
CCDC43-205ENST00000592333 MRFAP1Q9Y605 127 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms