RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 XAB2Q9HCS7 855 aaKnown RBP3.4□□□□□ -1.87
VMP1-212ENST00000591782 POLE3Q9NRF9 147 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 SUCLA2Q9P2R7 463 aaPredicted RBP3.4□□□□□ -1.87
VMP1-212ENST00000591782 PADI3Q9ULW8 664 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 CLEC4AQ9UMR7 237 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 VDAC3Q9Y277 283 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 SH3GLB1Q9Y371 365 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 CBY1Q9Y3M2 126 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 LOXL2Q9Y4K0 774 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 CLIC4Q9Y696 253 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 NCOA3Q9Y6Q9 1424 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 GOLGA8QA0A0J9YX86 632 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 A0A1B0GUV1 79 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 GOLGA8OA6NCC3 632 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 LRRC72A6NJI9 287 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 SYCE1LA8MT33 242 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 GOLGA8NF8WBI6 632 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 GOLGA8RI6L899 631 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 TRDMT1O14717 391 aaKnown RBP3.39□□□□□ -1.87
VMP1-212ENST00000591782 MAPK13O15264 365 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 SLC16A5O15375 505 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 NVLO15381 856 aaKnown RBP3.39□□□□□ -1.87
VMP1-212ENST00000591782 RNF113AO15541 343 aaKnown RBP3.39□□□□□ -1.87
VMP1-212ENST00000591782 SPINT2O43291 252 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 HCRTR2O43614 444 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 DKC1O60832 514 aaKnown RBP eCLIP3.39□□□□□ -1.87
VMP1-212ENST00000591782 PFDN1O60925 122 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 JRKO75564 520 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 OR5F1O95221 314 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 SLU7O95391 586 aaKnown RBP3.39□□□□□ -1.87
VMP1-212ENST00000591782 OLFM2O95897 454 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 NPPAP01160 153 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 KRT6AP02538 564 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 OPN1MWP04001 364 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 KRT6BP04259 564 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 SNRNP70P08621 437 aaKnown RBP3.39□□□□□ -1.87
VMP1-212ENST00000591782 OPN1MW2P0DN77 364 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 OPN1MW3P0DN78 364 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 ACADMP11310 421 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 CDH2P19022 906 aaPredicted RBP3.39□□□□□ -1.87
VMP1-212ENST00000591782 EIF2S2P20042 333 aaKnown RBP3.39□□□□□ -1.87
VMP1-212ENST00000591782 ANXA13P27216 316 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 CORO1AP31146 461 aaKnown RBP3.39□□□□□ -1.87
VMP1-212ENST00000591782 RPL9P32969 192 aaKnown RBP3.39□□□□□ -1.87
VMP1-212ENST00000591782 IFNAR2P48551 515 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 GALCP54803 685 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 B2MP61769 119 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 S100A12P80511 92 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 MRPS25P82663 173 aaKnown RBP3.39□□□□□ -1.87
VMP1-212ENST00000591782 SCRN3Q0VDG4 424 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 GRIK2Q13002 908 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 ITGB3BPQ13352 177 aaPredicted RBP3.39□□□□□ -1.87
VMP1-212ENST00000591782 MAMLD1Q13495 774 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 SNX1Q13596 522 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 CUL1Q13616 776 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 KLHL22Q53GT1 634 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 SMUG1Q53HV7 270 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 HSP90AA5PQ58FG0 334 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 LRIF1Q5T3J3 769 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 ERICH5Q6P6B1 374 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 KLHL35Q6PF15 583 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 FASTKD5Q7L8L6 764 aaKnown RBP3.39□□□□□ -1.87
VMP1-212ENST00000591782 PPP1R42Q7Z4L9 355 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 ZER1Q7Z7L7 766 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 GALNT5Q7Z7M9 940 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 COMTD1Q86VU5 262 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 NRROSQ86YC3 692 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 EPHX4Q8IUS5 362 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 C12orf56Q8IXR9 622 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 DCP1BQ8IZD4 617 aaKnown RBP3.39□□□□□ -1.87
VMP1-212ENST00000591782 WDTC1Q8N5D0 677 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 RBMXL3Q8N7X1 1067 aaKnown RBP3.39□□□□□ -1.87
VMP1-212ENST00000591782 LSMEM1Q8N8F7 131 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 DENND6BQ8NEG7 585 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 SPATA20Q8TB22 786 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 MAGEC3Q8TD91 643 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 SLC20A1Q8WUM9 679 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 FIG4Q92562 907 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 SLC35B4Q969S0 331 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 OPTNQ96CV9 577 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 CNDP1Q96KN2 507 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 LMLNQ96KR4 655 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 CFAP57Q96MR6 1250 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 IL17FQ96PD4 163 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 DUX5Q96PT3 197 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 MTERF1Q99551 399 aaKnown RBP3.39□□□□□ -1.87
VMP1-212ENST00000591782 TEX13BQ9BXU2 312 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 UPF3BQ9BZI7 483 aaKnown RBP3.39□□□□□ -1.87
VMP1-212ENST00000591782 ADNPQ9H2P0 1102 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 PIGMQ9H3S5 423 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 EHD1Q9H4M9 534 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 BICC1Q9H694 974 aaKnown RBP3.39□□□□□ -1.87
VMP1-212ENST00000591782 DNAJC18Q9H819 358 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 FANCEQ9HB96 536 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 LRRC4Q9HBW1 653 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 C8orf4Q9NR00 106 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 FARSBQ9NSD9 589 aaKnown RBP3.39□□□□□ -1.87
VMP1-212ENST00000591782 ANKEF1Q9NU02 776 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 HCFC1R1Q9NWW0 138 aa3.39□□□□□ -1.87
VMP1-212ENST00000591782 WWOXQ9NZC7 414 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms