RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 PSMG3-AS1Q96PY0 264 aa10.09□□□□□ -0.79
VPS4B-207ENST00000591519 TRAPPC9Q96Q05 1148 aa10.09□□□□□ -0.79
VPS4B-207ENST00000591519 FERD3LQ96RJ6 166 aa10.09□□□□□ -0.79
VPS4B-207ENST00000591519 TBL1YQ9BQ87 522 aa10.09□□□□□ -0.79
VPS4B-207ENST00000591519 DPH2Q9BQC3 489 aaPredicted RBP10.09□□□□□ -0.79
VPS4B-207ENST00000591519 CHRNA10Q9GZZ6 450 aa10.09□□□□□ -0.79
VPS4B-207ENST00000591519 ING2Q9H160 280 aa10.09□□□□□ -0.79
VPS4B-207ENST00000591519 CHST8Q9H2A9 424 aa10.09□□□□□ -0.79
VPS4B-207ENST00000591519 FAM96AQ9H5X1 160 aa10.09□□□□□ -0.79
VPS4B-207ENST00000591519 COG4Q9H9E3 785 aa10.09□□□□□ -0.79
VPS4B-207ENST00000591519 NLE1Q9NVX2 485 aaPredicted RBP10.09□□□□□ -0.79
VPS4B-207ENST00000591519 SERTAD3Q9UJW9 196 aa10.09□□□□□ -0.79
VPS4B-207ENST00000591519 GOLGA6L9A6NEM1 432 aa10.08□□□□□ -0.8
VPS4B-207ENST00000591519 IFRD1O00458 451 aaPredicted RBP10.08□□□□□ -0.8
VPS4B-207ENST00000591519 BTN3A1O00481 513 aa10.08□□□□□ -0.8
VPS4B-207ENST00000591519 AP2A2O94973 939 aa10.08□□□□□ -0.8
VPS4B-207ENST00000591519 GP1BBP13224 206 aa10.08□□□□□ -0.8
VPS4B-207ENST00000591519 ST6GAL1P15907 406 aa10.08□□□□□ -0.8
VPS4B-207ENST00000591519 ACRV1P26436 265 aa10.08□□□□□ -0.8
VPS4B-207ENST00000591519 PDHA2P29803 388 aa10.08□□□□□ -0.8
VPS4B-207ENST00000591519 MC4RP32245 332 aa10.08□□□□□ -0.8
VPS4B-207ENST00000591519 PREPP48147 710 aa10.08□□□□□ -0.8
VPS4B-207ENST00000591519 CDKN1CP49918 316 aaPredicted RBP10.08□□□□□ -0.8
VPS4B-207ENST00000591519 TMPRSS15P98073 1019 aa10.08□□□□□ -0.8
VPS4B-207ENST00000591519 ABRQ12979 859 aa10.08□□□□□ -0.8
VPS4B-207ENST00000591519 CBLBQ13191 982 aa10.08□□□□□ -0.8
VPS4B-207ENST00000591519 BOP1Q14137 746 aaKnown RBP10.08□□□□□ -0.8
VPS4B-207ENST00000591519 TUSC1Q2TAM9 212 aa10.08□□□□□ -0.8
VPS4B-207ENST00000591519 PRAMEF17Q5VTA0 474 aa10.08□□□□□ -0.8
VPS4B-207ENST00000591519 ZNF449Q6P9G9 518 aa10.08□□□□□ -0.8
VPS4B-207ENST00000591519 SERPINA9Q86WD7 417 aa10.08□□□□□ -0.8
VPS4B-207ENST00000591519 AMIGO1Q86WK6 493 aa10.08□□□□□ -0.8
VPS4B-207ENST00000591519 HPS6Q86YV9 775 aa10.08□□□□□ -0.8
VPS4B-207ENST00000591519 ADGRF3Q8IZF5 1079 aa10.08□□□□□ -0.8
VPS4B-207ENST00000591519 TAB3Q8N5C8 712 aaPredicted RBP10.08□□□□□ -0.8
VPS4B-207ENST00000591519 GALNT11Q8NCW6 608 aa10.08□□□□□ -0.8
VPS4B-207ENST00000591519 PHC3Q8NDX5 983 aa10.08□□□□□ -0.8
VPS4B-207ENST00000591519 OR1L3Q8NH93 324 aa10.08□□□□□ -0.8
VPS4B-207ENST00000591519 STYXQ8WUJ0 223 aa10.08□□□□□ -0.8
VPS4B-207ENST00000591519 TFGQ92734 400 aaPredicted RBP10.08□□□□□ -0.8
VPS4B-207ENST00000591519 LRRC45Q96CN5 670 aa10.08□□□□□ -0.8
VPS4B-207ENST00000591519 SLC25A23Q9BV35 468 aa10.08□□□□□ -0.8
VPS4B-207ENST00000591519 TLR10Q9BXR5 811 aa10.08□□□□□ -0.8
VPS4B-207ENST00000591519 VPS37BQ9H9H4 285 aa10.08□□□□□ -0.8
VPS4B-207ENST00000591519 FANCEQ9HB96 536 aa10.08□□□□□ -0.8
VPS4B-207ENST00000591519 ACSS2Q9NR19 701 aa10.08□□□□□ -0.8
VPS4B-207ENST00000591519 PCMTD2Q9NV79 361 aa10.08□□□□□ -0.8
VPS4B-207ENST00000591519 SOHLH2Q9NX45 425 aa10.08□□□□□ -0.8
VPS4B-207ENST00000591519 TCFL5Q9UL49 500 aa10.08□□□□□ -0.8
VPS4B-207ENST00000591519 R3HDM2Q9Y2K5 976 aaKnown RBP10.08□□□□□ -0.8
VPS4B-207ENST00000591519 PIKFYVEQ9Y2I7 2098 aa10.08□□□□□ -0.8
VPS4B-207ENST00000591519 USP9YO00507 2555 aaPredicted RBP10.07□□□□□ -0.8
VPS4B-207ENST00000591519 MROH6A6NGR9 719 aa10.07□□□□□ -0.8
VPS4B-207ENST00000591519 C2orf74A8MZ97 194 aa10.07□□□□□ -0.8
VPS4B-207ENST00000591519 H3BMH7 237 aa10.07□□□□□ -0.8
VPS4B-207ENST00000591519 PSMD3O43242 534 aa10.07□□□□□ -0.8
VPS4B-207ENST00000591519 METTL18O95568 372 aa10.07□□□□□ -0.8
VPS4B-207ENST00000591519 HBQ1P09105 142 aa10.07□□□□□ -0.8
VPS4B-207ENST00000591519 ACADLP28330 430 aa10.07□□□□□ -0.8
VPS4B-207ENST00000591519 CXCR5P32302 372 aa10.07□□□□□ -0.8
VPS4B-207ENST00000591519 ARCN1P48444 511 aaKnown RBP10.07□□□□□ -0.8
VPS4B-207ENST00000591519 CCL11P51671 97 aa10.07□□□□□ -0.8
VPS4B-207ENST00000591519 PGDP52209 483 aa10.07□□□□□ -0.8
VPS4B-207ENST00000591519 CACNG1Q06432 222 aa10.07□□□□□ -0.8
VPS4B-207ENST00000591519 SPARCL1Q14515 664 aa10.07□□□□□ -0.8
VPS4B-207ENST00000591519 ZNF385CQ66K41 422 aaPredicted RBP10.07□□□□□ -0.8
VPS4B-207ENST00000591519 CPZQ66K79 652 aa10.07□□□□□ -0.8
VPS4B-207ENST00000591519 MED25Q71SY5 747 aa10.07□□□□□ -0.8
VPS4B-207ENST00000591519 REXO1L1PQ8IX06 675 aa10.07□□□□□ -0.8
VPS4B-207ENST00000591519 PIANPQ8IYJ0 282 aa10.07□□□□□ -0.8
VPS4B-207ENST00000591519 CLDN19Q8N6F1 224 aa10.07□□□□□ -0.8
VPS4B-207ENST00000591519 ENDOVQ8N8Q3 282 aaKnown RBP10.07□□□□□ -0.8
VPS4B-207ENST00000591519 TMEM102Q8N9M5 508 aaPredicted RBP10.07□□□□□ -0.8
VPS4B-207ENST00000591519 GLIS1Q8NBF1 620 aa10.07□□□□□ -0.8
VPS4B-207ENST00000591519 OR52E1Q8NGJ3 308 aa10.07□□□□□ -0.8
VPS4B-207ENST00000591519 ATG4AQ8WYN0 398 aa10.07□□□□□ -0.8
VPS4B-207ENST00000591519 CLIP3Q96DZ5 547 aa10.07□□□□□ -0.8
VPS4B-207ENST00000591519 PDLIM2Q96JY6 352 aa10.07□□□□□ -0.8
VPS4B-207ENST00000591519 DNAJC1Q96KC8 554 aaKnown RBP10.07□□□□□ -0.8
VPS4B-207ENST00000591519 ACTR5Q9H9F9 607 aaPredicted RBP10.07□□□□□ -0.8
VPS4B-207ENST00000591519 SLC24A3Q9HC58 644 aa10.07□□□□□ -0.8
VPS4B-207ENST00000591519 ACTR10Q9NZ32 417 aa10.07□□□□□ -0.8
VPS4B-207ENST00000591519 FAM8A1Q9UBU6 413 aa10.07□□□□□ -0.8
VPS4B-207ENST00000591519 SNX7Q9UNH6 387 aa10.07□□□□□ -0.8
VPS4B-207ENST00000591519 ZNF451Q9Y4E5 1061 aa10.07□□□□□ -0.8
VPS4B-207ENST00000591519 TNRC6AQ8NDV7 1962 aaKnown RBP10.06□□□□□ -0.8
VPS4B-207ENST00000591519 USP9XQ93008 2570 aaPredicted RBP10.06□□□□□ -0.8
VPS4B-207ENST00000591519 GSAPA4D1B5 854 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 ARGFXA6NJG6 315 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 FIGNL2A6NMB9 653 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 USP27XA6NNY8 438 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 TTLL8A6PVC2 850 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 TMEM150CB9EJG8 249 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 QSOX1O00391 747 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 CCL22O00626 93 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 LIN7AO14910 233 aaPredicted RBP10.06□□□□□ -0.8
VPS4B-207ENST00000591519 CEP104O60308 925 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 SORBS2O94875 1100 aaKnown RBP10.06□□□□□ -0.8
VPS4B-207ENST00000591519 TMEM63AO94886 807 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 TPH1P17752 444 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms