RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 OR51F1A6NGY5 319 aa17.5■□□□□ 0.39
VAT1-208ENST00000590924 QSOX1O00391 747 aa17.5■□□□□ 0.39
VAT1-208ENST00000590924 GPR39O43194 453 aa17.5■□□□□ 0.39
VAT1-208ENST00000590924 BANF1O75531 89 aa17.5■□□□□ 0.39
VAT1-208ENST00000590924 ZNF28P17035 718 aa17.5■□□□□ 0.39
VAT1-208ENST00000590924 CA5AP35218 305 aa17.5■□□□□ 0.39
VAT1-208ENST00000590924 CDKN1CP49918 316 aaPredicted RBP17.5■□□□□ 0.39
VAT1-208ENST00000590924 SH3BP2P78314 561 aa17.5■□□□□ 0.39
VAT1-208ENST00000590924 CACHD1Q5VU97 1274 aa17.5■□□□□ 0.39
VAT1-208ENST00000590924 PACS1Q6VY07 963 aa17.5■□□□□ 0.39
VAT1-208ENST00000590924 ZBED8Q8IZ13 594 aa17.5■□□□□ 0.39
VAT1-208ENST00000590924 RASGEF1AQ8N9B8 481 aa17.5■□□□□ 0.39
VAT1-208ENST00000590924 FBXO36Q8NEA4 188 aa17.5■□□□□ 0.39
VAT1-208ENST00000590924 SAYSD1Q9NPB0 183 aa17.5■□□□□ 0.39
VAT1-208ENST00000590924 SEMA5BQ9P283 1151 aa17.5■□□□□ 0.39
VAT1-208ENST00000590924 CHMP2BQ9UQN3 213 aa17.5■□□□□ 0.39
VAT1-208ENST00000590924 SEC16AO15027 2179 aa17.5■□□□□ 0.39
VAT1-208ENST00000590924 UBR5O95071 2799 aaPredicted RBP17.5■□□□□ 0.39
VAT1-208ENST00000590924 F8W8V4 182 aa17.49■□□□□ 0.39
VAT1-208ENST00000590924 KIF1CO43896 1103 aaKnown RBP17.49■□□□□ 0.39
VAT1-208ENST00000590924 AP2A2O94973 939 aa17.49■□□□□ 0.39
VAT1-208ENST00000590924 FGF5P12034 268 aa17.49■□□□□ 0.39
VAT1-208ENST00000590924 ATP1B2P14415 290 aaPredicted RBP17.49■□□□□ 0.39
VAT1-208ENST00000590924 TCN2P20062 427 aa17.49■□□□□ 0.39
VAT1-208ENST00000590924 OGNP20774 298 aaKnown RBP17.49■□□□□ 0.39
VAT1-208ENST00000590924 AKT1P31749 480 aa17.49■□□□□ 0.39
VAT1-208ENST00000590924 NSG1P42857 185 aa17.49■□□□□ 0.39
VAT1-208ENST00000590924 CARSP49589 748 aaKnown RBP17.49■□□□□ 0.39
VAT1-208ENST00000590924 CTSCP53634 463 aa17.49■□□□□ 0.39
VAT1-208ENST00000590924 THOC5Q13769 683 aaKnown RBP17.49■□□□□ 0.39
VAT1-208ENST00000590924 DBN1Q16643 649 aa17.49■□□□□ 0.39
VAT1-208ENST00000590924 TEX35Q5T0J7 233 aa17.49■□□□□ 0.39
VAT1-208ENST00000590924 CYB5D1Q6P9G0 228 aa17.49■□□□□ 0.39
VAT1-208ENST00000590924 ZNF449Q6P9G9 518 aa17.49■□□□□ 0.39
VAT1-208ENST00000590924 UNC5AQ6ZN44 842 aa17.49■□□□□ 0.39
VAT1-208ENST00000590924 PALM2Q8IXS6 379 aa17.49■□□□□ 0.39
VAT1-208ENST00000590924 APOBEC4Q8WW27 367 aaKnown RBP17.49■□□□□ 0.39
VAT1-208ENST00000590924 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.49■□□□□ 0.39
VAT1-208ENST00000590924 FMO2Q99518 471 aa17.49■□□□□ 0.39
VAT1-208ENST00000590924 WDR83Q9BRX9 315 aaKnown RBP17.49■□□□□ 0.39
VAT1-208ENST00000590924 C20orf96Q9NUD7 363 aaPredicted RBP17.49■□□□□ 0.39
VAT1-208ENST00000590924 VPS9D1Q9Y2B5 631 aa17.49■□□□□ 0.39
VAT1-208ENST00000590924 MED13Q9UHV7 2174 aa17.48■□□□□ 0.39
VAT1-208ENST00000590924 POP7O75817 140 aaKnown RBP17.48■□□□□ 0.39
VAT1-208ENST00000590924 GSTM1P09488 218 aa17.48■□□□□ 0.39
VAT1-208ENST00000590924 NELFEP18615 380 aaKnown RBP17.48■□□□□ 0.39
VAT1-208ENST00000590924 F8A1P23610 371 aa17.48■□□□□ 0.39
VAT1-208ENST00000590924 DLSTP36957 453 aa17.48■□□□□ 0.39
VAT1-208ENST00000590924 MAGEA4P43358 317 aa17.48■□□□□ 0.39
VAT1-208ENST00000590924 GSTM4Q03013 218 aa17.48■□□□□ 0.39
VAT1-208ENST00000590924 TLE1Q04724 770 aa17.48■□□□□ 0.39
VAT1-208ENST00000590924 RPE65Q16518 533 aa17.48■□□□□ 0.39
VAT1-208ENST00000590924 TYSND1Q2T9J0 566 aa17.48■□□□□ 0.39
VAT1-208ENST00000590924 BCL7AQ4VC05 210 aa17.48■□□□□ 0.39
VAT1-208ENST00000590924 HP1BP3Q5SSJ5 553 aaPredicted RBP17.48■□□□□ 0.39
VAT1-208ENST00000590924 RNF187Q5TA31 235 aaPredicted RBP17.48■□□□□ 0.39
VAT1-208ENST00000590924 IRGCQ6NXR0 463 aa17.48■□□□□ 0.39
VAT1-208ENST00000590924 C6orf15Q6UXA7 325 aaPredicted RBP17.48■□□□□ 0.39
VAT1-208ENST00000590924 FAM92BQ6ZTR7 304 aa17.48■□□□□ 0.39
VAT1-208ENST00000590924 ANKMY2Q8IV38 441 aa17.48■□□□□ 0.39
VAT1-208ENST00000590924 RASGRP3Q8IV61 690 aa17.48■□□□□ 0.39
VAT1-208ENST00000590924 GALNT6Q8NCL4 622 aa17.48■□□□□ 0.39
VAT1-208ENST00000590924 C9orf43Q8TAL5 461 aaPredicted RBP17.48■□□□□ 0.39
VAT1-208ENST00000590924 GSDMBQ8TAX9 411 aa17.48■□□□□ 0.39
VAT1-208ENST00000590924 LINC00615Q96LM1 132 aaPredicted RBP17.48■□□□□ 0.39
VAT1-208ENST00000590924 TRIM56Q9BRZ2 755 aaKnown RBP17.48■□□□□ 0.39
VAT1-208ENST00000590924 FAM167BQ9BTA0 163 aa17.48■□□□□ 0.39
VAT1-208ENST00000590924 PLAC1Q9HBJ0 212 aa17.48■□□□□ 0.39
VAT1-208ENST00000590924 MOCS1Q9NZB8 636 aa17.48■□□□□ 0.39
VAT1-208ENST00000590924 MARCH4Q9P2E8 410 aaPredicted RBP17.48■□□□□ 0.39
VAT1-208ENST00000590924 MRPS18BQ9Y676 258 aaKnown RBP17.48■□□□□ 0.39
VAT1-208ENST00000590924 OR2AG2A6NM03 316 aa17.47■□□□□ 0.39
VAT1-208ENST00000590924 SPAG6O75602 509 aa17.47■□□□□ 0.39
VAT1-208ENST00000590924 KIAA0754O94854 1291 aa17.47■□□□□ 0.39
VAT1-208ENST00000590924 PRSS56P0CW18 603 aa17.47■□□□□ 0.39
VAT1-208ENST00000590924 TNFRSF8P28908 595 aa17.47■□□□□ 0.39
VAT1-208ENST00000590924 ECHS1P30084 290 aa17.47■□□□□ 0.39
VAT1-208ENST00000590924 ADARP55265 1226 aaKnown RBP17.47■□□□□ 0.39
VAT1-208ENST00000590924 NFE2L1Q14494 772 aa17.47■□□□□ 0.39
VAT1-208ENST00000590924 FASTKD3Q14CZ7 662 aaKnown RBP17.47■□□□□ 0.39
VAT1-208ENST00000590924 DEFB109BQ30KR1 87 aa17.47■□□□□ 0.39
VAT1-208ENST00000590924 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.47■□□□□ 0.39
VAT1-208ENST00000590924 METRNLQ641Q3 311 aa17.47■□□□□ 0.39
VAT1-208ENST00000590924 KLHL35Q6PF15 583 aa17.47■□□□□ 0.39
VAT1-208ENST00000590924 TMEM220Q6QAJ8 160 aa17.47■□□□□ 0.39
VAT1-208ENST00000590924 FAM83HQ6ZRV2 1179 aaPredicted RBP17.47■□□□□ 0.39
VAT1-208ENST00000590924 KCNMB4Q86W47 210 aa17.47■□□□□ 0.39
VAT1-208ENST00000590924 CCDC25Q86WR0 208 aa17.47■□□□□ 0.39
VAT1-208ENST00000590924 LRRC6Q86X45 466 aa17.47■□□□□ 0.39
VAT1-208ENST00000590924 PPP1R3BQ86XI6 285 aa17.47■□□□□ 0.39
VAT1-208ENST00000590924 PTRH1Q86Y79 214 aaKnown RBP17.47■□□□□ 0.39
VAT1-208ENST00000590924 CILP2Q8IUL8 1156 aa17.47■□□□□ 0.39
VAT1-208ENST00000590924 UBXN4Q92575 508 aa17.47■□□□□ 0.39
VAT1-208ENST00000590924 CERS2Q96G23 380 aa17.47■□□□□ 0.39
VAT1-208ENST00000590924 CFAP36Q96G28 342 aa17.47■□□□□ 0.39
VAT1-208ENST00000590924 SLC41A2Q96JW4 573 aa17.47■□□□□ 0.39
VAT1-208ENST00000590924 INTS10Q9NVR2 710 aaKnown RBP17.47■□□□□ 0.39
VAT1-208ENST00000590924 ANAPC2Q9UJX6 822 aa17.47■□□□□ 0.39
VAT1-208ENST00000590924 CROTQ9UKG9 612 aa17.47■□□□□ 0.39
VAT1-208ENST00000590924 PSMD13Q9UNM6 376 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms