RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 GPR78Q96P69 363 aa16.53■□□□□ 0.24
SCAMP4-211ENST00000588907 FERD3LQ96RJ6 166 aa16.53■□□□□ 0.24
SCAMP4-211ENST00000588907 SPATA7Q9P0W8 599 aa16.53■□□□□ 0.24
SCAMP4-211ENST00000588907 DNAH14Q0VDD8 3507 aa16.53■□□□□ 0.24
SCAMP4-211ENST00000588907 FAM221BA6H8Z2 402 aa16.52■□□□□ 0.24
SCAMP4-211ENST00000588907 OR52A4PA6NMU1 304 aa16.52■□□□□ 0.24
SCAMP4-211ENST00000588907 MYO1CO00159 1063 aa16.52■□□□□ 0.24
SCAMP4-211ENST00000588907 NUDT21O43809 227 aaKnown RBP16.52■□□□□ 0.24
SCAMP4-211ENST00000588907 TYROBPO43914 113 aa16.52■□□□□ 0.24
SCAMP4-211ENST00000588907 NOBOXO60393 691 aa16.52■□□□□ 0.24
SCAMP4-211ENST00000588907 TAC1P20366 129 aa16.52■□□□□ 0.24
SCAMP4-211ENST00000588907 HHEXQ03014 270 aa16.52■□□□□ 0.24
SCAMP4-211ENST00000588907 DLG1Q12959 904 aa16.52■□□□□ 0.24
SCAMP4-211ENST00000588907 ARHGAP19Q14CB8 494 aa16.52■□□□□ 0.24
SCAMP4-211ENST00000588907 NR0B2Q15466 257 aa16.52■□□□□ 0.24
SCAMP4-211ENST00000588907 PPP1R3AQ16821 1122 aa16.52■□□□□ 0.24
SCAMP4-211ENST00000588907 TECRLQ5HYJ1 363 aa16.52■□□□□ 0.24
SCAMP4-211ENST00000588907 N4BP2L1Q5TBK1 243 aaPredicted RBP16.52■□□□□ 0.24
SCAMP4-211ENST00000588907 GATAD2AQ86YP4 633 aa16.52■□□□□ 0.24
SCAMP4-211ENST00000588907 PLD6Q8N2A8 252 aaKnown RBP16.52■□□□□ 0.24
SCAMP4-211ENST00000588907 CCDC138Q96M89 665 aa16.52■□□□□ 0.24
SCAMP4-211ENST00000588907 ALG9Q9H6U8 611 aa16.52■□□□□ 0.24
SCAMP4-211ENST00000588907 SLC40A1Q9NP59 571 aa16.52■□□□□ 0.24
SCAMP4-211ENST00000588907 NUDT4Q9NZJ9 180 aa16.52■□□□□ 0.24
SCAMP4-211ENST00000588907 SCHIP1Q9P0W5 487 aaPredicted RBP16.52■□□□□ 0.24
SCAMP4-211ENST00000588907 ZNF624Q9P2J8 865 aaPredicted RBP16.52■□□□□ 0.24
SCAMP4-211ENST00000588907 LNPEPQ9UIQ6 1025 aa16.52■□□□□ 0.24
SCAMP4-211ENST00000588907 TSR3Q9UJK0 312 aaKnown RBP16.52■□□□□ 0.24
SCAMP4-211ENST00000588907 FRYLO94915 3013 aa16.51■□□□□ 0.23
SCAMP4-211ENST00000588907 ARHGEF33A8MVX0 844 aa16.51■□□□□ 0.23
SCAMP4-211ENST00000588907 CDC7O00311 574 aa16.51■□□□□ 0.23
SCAMP4-211ENST00000588907 CDX4O14627 284 aaPredicted RBP16.51■□□□□ 0.23
SCAMP4-211ENST00000588907 EML2O95834 649 aa16.51■□□□□ 0.23
SCAMP4-211ENST00000588907 SYF2O95926 243 aaKnown RBP16.51■□□□□ 0.23
SCAMP4-211ENST00000588907 ANXA5P08758 320 aa16.51■□□□□ 0.23
SCAMP4-211ENST00000588907 GIMD1P0DJR0 217 aa16.51■□□□□ 0.23
SCAMP4-211ENST00000588907 TPBGLP0DKB5 382 aa16.51■□□□□ 0.23
SCAMP4-211ENST00000588907 PNLIPP16233 465 aa16.51■□□□□ 0.23
SCAMP4-211ENST00000588907 SLC19A1P41440 591 aa16.51■□□□□ 0.23
SCAMP4-211ENST00000588907 GLRBP48167 497 aa16.51■□□□□ 0.23
SCAMP4-211ENST00000588907 DUSP3P51452 185 aaPredicted RBP16.51■□□□□ 0.23
SCAMP4-211ENST00000588907 TGFBIQ15582 683 aa16.51■□□□□ 0.23
SCAMP4-211ENST00000588907 ARL14Q8N4G2 192 aa16.51■□□□□ 0.23
SCAMP4-211ENST00000588907 SPATA6LQ8N4H0 392 aa16.51■□□□□ 0.23
SCAMP4-211ENST00000588907 KYQ8NBH2 561 aa16.51■□□□□ 0.23
SCAMP4-211ENST00000588907 OR5AR1Q8NGP9 310 aa16.51■□□□□ 0.23
SCAMP4-211ENST00000588907 OR9A1PQ8NGU1 263 aa16.51■□□□□ 0.23
SCAMP4-211ENST00000588907 NAT6Q93015 286 aa16.51■□□□□ 0.23
SCAMP4-211ENST00000588907 ARL8AQ96BM9 186 aa16.51■□□□□ 0.23
SCAMP4-211ENST00000588907 PTERQ96BW5 349 aa16.51■□□□□ 0.23
SCAMP4-211ENST00000588907 CCDC126Q96EE4 140 aa16.51■□□□□ 0.23
SCAMP4-211ENST00000588907 EPB41L1Q9H4G0 881 aa16.51■□□□□ 0.23
SCAMP4-211ENST00000588907 PARD6AQ9NPB6 346 aa16.51■□□□□ 0.23
SCAMP4-211ENST00000588907 ARL15Q9NXU5 204 aa16.51■□□□□ 0.23
SCAMP4-211ENST00000588907 SIRPGQ9P1W8 387 aa16.51■□□□□ 0.23
SCAMP4-211ENST00000588907 XPR1Q9UBH6 696 aa16.51■□□□□ 0.23
SCAMP4-211ENST00000588907 PDE10AQ9Y233 779 aa16.51■□□□□ 0.23
SCAMP4-211ENST00000588907 PLLPQ9Y342 182 aa16.51■□□□□ 0.23
SCAMP4-211ENST00000588907 CFAP20Q9Y6A4 193 aaKnown RBP16.51■□□□□ 0.23
SCAMP4-211ENST00000588907 COL5A1P20908 1838 aaPredicted RBP16.5■□□□□ 0.23
SCAMP4-211ENST00000588907 LILRA5A6NI73 299 aa16.5■□□□□ 0.23
SCAMP4-211ENST00000588907 SMIM24O75264 130 aa16.5■□□□□ 0.23
SCAMP4-211ENST00000588907 IPO13O94829 963 aaKnown RBP16.5■□□□□ 0.23
SCAMP4-211ENST00000588907 GLB1P16278 677 aa16.5■□□□□ 0.23
SCAMP4-211ENST00000588907 TGM1P22735 817 aa16.5■□□□□ 0.23
SCAMP4-211ENST00000588907 SHMT2P34897 504 aa16.5■□□□□ 0.23
SCAMP4-211ENST00000588907 GPR3P46089 330 aa16.5■□□□□ 0.23
SCAMP4-211ENST00000588907 LIMK1P53667 647 aa16.5■□□□□ 0.23
SCAMP4-211ENST00000588907 EPHA4P54764 986 aa16.5■□□□□ 0.23
SCAMP4-211ENST00000588907 OR4D1Q15615 310 aa16.5■□□□□ 0.23
SCAMP4-211ENST00000588907 TTMPQ5BVD1 217 aa16.5■□□□□ 0.23
SCAMP4-211ENST00000588907 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.5■□□□□ 0.23
SCAMP4-211ENST00000588907 SULT1C3Q6IMI6 304 aa16.5■□□□□ 0.23
SCAMP4-211ENST00000588907 METTL2BQ6P1Q9 378 aaKnown RBP16.5■□□□□ 0.23
SCAMP4-211ENST00000588907 KLHL35Q6PF15 583 aa16.5■□□□□ 0.23
SCAMP4-211ENST00000588907 SLC22A9Q8IVM8 553 aa16.5■□□□□ 0.23
SCAMP4-211ENST00000588907 PDPRQ8NCN5 879 aa16.5■□□□□ 0.23
SCAMP4-211ENST00000588907 OR2I1PQ8NGU4 316 aa16.5■□□□□ 0.23
SCAMP4-211ENST00000588907 SREK1Q8WXA9 508 aaKnown RBP16.5■□□□□ 0.23
SCAMP4-211ENST00000588907 ATOH8Q96SQ7 321 aa16.5■□□□□ 0.23
SCAMP4-211ENST00000588907 HGH1Q9BTY7 390 aa16.5■□□□□ 0.23
SCAMP4-211ENST00000588907 CNOT10Q9H9A5 744 aaKnown RBP16.5■□□□□ 0.23
SCAMP4-211ENST00000588907 KCNK9Q9NPC2 374 aa16.5■□□□□ 0.23
SCAMP4-211ENST00000588907 NKIRAS1Q9NYS0 192 aa16.5■□□□□ 0.23
SCAMP4-211ENST00000588907 TMEM216Q9P0N5 145 aa16.5■□□□□ 0.23
SCAMP4-211ENST00000588907 ADAMTS6Q9UKP5 1117 aa16.5■□□□□ 0.23
SCAMP4-211ENST00000588907 RHPN2P1A8MT19 583 aa16.49■□□□□ 0.23
SCAMP4-211ENST00000588907 FOXO6A8MYZ6 492 aa16.49■□□□□ 0.23
SCAMP4-211ENST00000588907 SUPT3HB4E1H0 165 aa16.49■□□□□ 0.23
SCAMP4-211ENST00000588907 TRIM38O00635 465 aa16.49■□□□□ 0.23
SCAMP4-211ENST00000588907 SIGLEC6O43699 453 aa16.49■□□□□ 0.23
SCAMP4-211ENST00000588907 PLIN3O60664 434 aa16.49■□□□□ 0.23
SCAMP4-211ENST00000588907 SPAG7O75391 227 aa16.49■□□□□ 0.23
SCAMP4-211ENST00000588907 SUPT3HO75486 399 aa16.49■□□□□ 0.23
SCAMP4-211ENST00000588907 CCND1P24385 295 aa16.49■□□□□ 0.23
SCAMP4-211ENST00000588907 BDKRB1P46663 353 aa16.49■□□□□ 0.23
SCAMP4-211ENST00000588907 RAB28P51157 221 aa16.49■□□□□ 0.23
SCAMP4-211ENST00000588907 NAA20P61599 178 aa16.49■□□□□ 0.23
SCAMP4-211ENST00000588907 NFKB2Q00653 900 aa16.49■□□□□ 0.23
SCAMP4-211ENST00000588907 ASPHQ12797 758 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms