RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 TBCELQ5QJ74 424 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 MMAAQ8IVH4 418 aaKnown RBP14.34□□□□□ -0.11
CCDC43-203ENST00000588210 RYBPQ8N488 228 aaPredicted RBP14.34□□□□□ -0.11
CCDC43-203ENST00000588210 TRIML2Q8N7C3 387 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 OR2AP1Q8NGE2 309 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 BRSK1Q8TDC3 778 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 BLOC1S5Q8TDH9 187 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 TSPEARQ8WU66 669 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 TFAP2CQ92754 450 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 SLC45A3Q96JT2 553 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 MUC13Q9H3R2 512 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 TUBB1Q9H4B7 451 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 ACTR3BQ9P1U1 418 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 GIMAP2Q9UG22 337 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 ARL5AQ9Y689 179 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 EML5Q05BV3 1969 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 LRRC14BA6NHZ5 514 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 H3BSA7 217 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 PPP6CO00743 305 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 ADH1BP00325 375 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 GFAPP14136 432 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 IDO1P14902 403 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 CST6Q15828 149 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 KCTD21Q4G0X4 260 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 FAM46CQ5VWP2 391 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 ALG1LQ6GMV1 187 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 OGFOD2Q6N063 350 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 DPY19L3Q6ZPD9 716 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 DDIASQ8IXT1 998 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 TMIEQ8NEW7 156 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 OR4L1Q8NH43 312 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 B4GALNT2Q8NHY0 566 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 FAM110BQ8TC76 370 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 RLN3Q8WXF3 142 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 KIAA1191Q96A73 305 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 NSUN5Q96P11 429 aaKnown RBP14.34□□□□□ -0.11
CCDC43-203ENST00000588210 DERL2Q9GZP9 239 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 CAAP1Q9H8G2 361 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 SYTL2Q9HCH5 934 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 SLC52A3Q9NQ40 469 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 AGPAT4Q9NRZ5 378 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 FAM86C1Q9NVL1 165 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 CMTM6Q9NX76 183 aa14.34□□□□□ -0.11
CCDC43-203ENST00000588210 RSL24D1Q9UHA3 163 aaKnown RBP14.34□□□□□ -0.11
CCDC43-203ENST00000588210 CACNA1HO95180 2353 aa14.33□□□□□ -0.12
CCDC43-203ENST00000588210 TRIM64CA6NLI5 447 aa14.33□□□□□ -0.12
CCDC43-203ENST00000588210 C1QTNF3-AMACRE9PGA6 284 aa14.33□□□□□ -0.12
CCDC43-203ENST00000588210 PLOD2O00469 737 aa14.33□□□□□ -0.12
CCDC43-203ENST00000588210 GJB3O75712 270 aa14.33□□□□□ -0.12
CCDC43-203ENST00000588210 BMP10O95393 424 aa14.33□□□□□ -0.12
CCDC43-203ENST00000588210 IGLV3-19P01714 112 aa14.33□□□□□ -0.12
CCDC43-203ENST00000588210 RPS17P08708 135 aaKnown RBP14.33□□□□□ -0.12
CCDC43-203ENST00000588210 PRR35P0CG20 571 aa14.33□□□□□ -0.12
CCDC43-203ENST00000588210 C5AR1P21730 350 aa14.33□□□□□ -0.12
CCDC43-203ENST00000588210 SLC6A2P23975 617 aa14.33□□□□□ -0.12
CCDC43-203ENST00000588210 PSMA4P25789 261 aaKnown RBP14.33□□□□□ -0.12
CCDC43-203ENST00000588210 PCSK6P29122 969 aa14.33□□□□□ -0.12
CCDC43-203ENST00000588210 CDK9P50750 372 aaKnown RBP14.33□□□□□ -0.12
CCDC43-203ENST00000588210 TPMTP51580 245 aa14.33□□□□□ -0.12
CCDC43-203ENST00000588210 NME5P56597 212 aa14.33□□□□□ -0.12
CCDC43-203ENST00000588210 RHOAP61586 193 aa14.33□□□□□ -0.12
CCDC43-203ENST00000588210 NAA20P61599 178 aa14.33□□□□□ -0.12
CCDC43-203ENST00000588210 NHLH1Q02575 133 aa14.33□□□□□ -0.12
CCDC43-203ENST00000588210 CLCQ05315 142 aa14.33□□□□□ -0.12
CCDC43-203ENST00000588210 SRSF5Q13243 272 aaKnown RBP14.33□□□□□ -0.12
CCDC43-203ENST00000588210 GALNT3Q14435 633 aa14.33□□□□□ -0.12
CCDC43-203ENST00000588210 ZNF235Q14590 738 aa14.33□□□□□ -0.12
CCDC43-203ENST00000588210 PTPRCAPQ14761 206 aa14.33□□□□□ -0.12
CCDC43-203ENST00000588210 VPS26BQ4G0F5 336 aa14.33□□□□□ -0.12
CCDC43-203ENST00000588210 LRRC23Q53EV4 343 aaPredicted RBP14.33□□□□□ -0.12
CCDC43-203ENST00000588210 BLOC1S3Q6QNY0 202 aa14.33□□□□□ -0.12
CCDC43-203ENST00000588210 CACUL1Q86Y37 369 aa14.33□□□□□ -0.12
CCDC43-203ENST00000588210 EPHX4Q8IUS5 362 aa14.33□□□□□ -0.12
CCDC43-203ENST00000588210 OR13C4Q8NGS5 318 aa14.33□□□□□ -0.12
CCDC43-203ENST00000588210 TUBGCP3Q96CW5 907 aa14.33□□□□□ -0.12
CCDC43-203ENST00000588210 LRRC58Q96CX6 371 aa14.33□□□□□ -0.12
CCDC43-203ENST00000588210 LRIG1Q96JA1 1093 aa14.33□□□□□ -0.12
CCDC43-203ENST00000588210 KCNA7Q96RP8 456 aa14.33□□□□□ -0.12
CCDC43-203ENST00000588210 HEPHQ9BQS7 1158 aa14.33□□□□□ -0.12
CCDC43-203ENST00000588210 TRIM54Q9BYV2 358 aa14.33□□□□□ -0.12
CCDC43-203ENST00000588210 TM6SF2Q9BZW4 377 aa14.33□□□□□ -0.12
CCDC43-203ENST00000588210 CLK4Q9HAZ1 481 aaKnown RBP14.33□□□□□ -0.12
CCDC43-203ENST00000588210 IL1RL2Q9HB29 575 aa14.33□□□□□ -0.12
CCDC43-203ENST00000588210 C8orf4Q9NR00 106 aa14.33□□□□□ -0.12
CCDC43-203ENST00000588210 IL36AQ9UHA7 158 aa14.33□□□□□ -0.12
CCDC43-203ENST00000588210 SAC3D1A6NKF1 404 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 MUSKO15146 869 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 TRMUO75648 421 aaKnown RBP14.32□□□□□ -0.12
CCDC43-203ENST00000588210 PRNPP04156 253 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 GPIP06744 558 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 HGFP14210 728 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 IL10P22301 178 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 OXTRP30559 389 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 GRIK2Q13002 908 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 SIM2Q14190 667 aaPredicted RBP14.32□□□□□ -0.12
CCDC43-203ENST00000588210 SLC36A4Q6YBV0 504 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 USP30Q70CQ3 517 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 CEP68Q76N32 757 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 SPATA19Q7Z5L4 167 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 CAMK1DQ8IU85 385 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms