RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 ALOX15P16050 662 aaPredicted RBP6.04□□□□□ -1.44
LIG3-206ENST00000586058 NDUFS1P28331 727 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 SERPINB3P29508 390 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 TRIM23P36406 574 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 BDKRB1P46663 353 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 CXCL12P48061 93 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 PREPP48147 710 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 KRT6CP48668 564 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 MNAT1P51948 309 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 TIAL1Q01085 375 aaKnown RBP eCLIP6.04□□□□□ -1.44
LIG3-206ENST00000586058 RPL6Q02878 288 aaKnown RBP6.04□□□□□ -1.44
LIG3-206ENST00000586058 DMTNQ08495 405 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 SIGLEC14Q08ET2 396 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 DMPKQ09013 629 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 ABRQ12979 859 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 BIRC2Q13490 618 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 NFE2L1Q14494 772 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 GBX1Q14549 363 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 HIST2H2ACQ16777 129 aaPredicted RBP6.04□□□□□ -1.44
LIG3-206ENST00000586058 PPP1R3AQ16821 1122 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 KHDC1Q4VXA5 237 aaKnown RBP6.04□□□□□ -1.44
LIG3-206ENST00000586058 UNC50Q53HI1 259 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 PAGE2BQ5JRK9 111 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 WDR45BQ5MNZ6 344 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 METTL21CQ5VZV1 264 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 HIST2H2AA3Q6FI13 130 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 CGB2Q6NT52 195 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 BLOC1S3Q6QNY0 202 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 ENPP7Q6UWV6 458 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 RD3Q7Z3Z2 195 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 GOLGA7Q7Z5G4 137 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 MILR1Q7Z6M3 343 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 TRIM48Q8IWZ4 208 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 RGL4Q8IZJ4 473 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 TBC1D19Q8N5T2 526 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 AVL9Q8NBF6 648 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 FBXO15Q8NCQ5 510 aaPredicted RBP6.04□□□□□ -1.44
LIG3-206ENST00000586058 CEP70Q8NHQ1 597 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 RFWD2Q8NHY2 731 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 AGAP11Q8TF27 550 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 ZNF483Q8TF39 744 aaPredicted RBP6.04□□□□□ -1.44
LIG3-206ENST00000586058 NAT14Q8WUY8 206 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 TWIST2Q8WVJ9 160 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 STON2Q8WXE9 905 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 ASB11Q8WXH4 323 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 SH3KBP1Q96B97 665 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 RHBDF1Q96CC6 855 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 FBXL8Q96CD0 374 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 C19orf60Q96EN9 201 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 CCDC97Q96F63 343 aaPredicted RBP6.04□□□□□ -1.44
LIG3-206ENST00000586058 C12orf66Q96MD2 445 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 SORT1Q99523 831 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 CCDC28BQ9BUN5 200 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 TMUB1Q9BVT8 246 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 GSDMCQ9BYG8 508 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 SLC29A3Q9BZD2 475 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 NUF2Q9BZD4 464 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 IPPKQ9H8X2 491 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 CCDC177Q9NQR7 707 aaPredicted RBP6.04□□□□□ -1.44
LIG3-206ENST00000586058 MBNL1Q9NR56 388 aaKnown RBP6.04□□□□□ -1.44
LIG3-206ENST00000586058 KLC4Q9NSK0 619 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 DNAJC11Q9NVH1 559 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 WSB2Q9NYS7 404 aaPredicted RBP6.04□□□□□ -1.44
LIG3-206ENST00000586058 SPATA7Q9P0W8 599 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 HEY2Q9UBP5 337 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 TRPS1Q9UHF7 1281 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 POLG2Q9UHN1 485 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 HAO1Q9UJM8 370 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 ADAMTS6Q9UKP5 1117 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 TMPRSS11EQ9UL52 423 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 SUFUQ9UMX1 484 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 SNX6Q9UNH7 406 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 DOLKQ9UPQ8 538 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 PDE10AQ9Y233 779 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 SLC17A4Q9Y2C5 497 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 TDRKHQ9Y2W6 561 aaKnown RBP6.04□□□□□ -1.44
LIG3-206ENST00000586058 TMEM98Q9Y2Y6 226 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 HS3ST3A1Q9Y663 406 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 CAPN7Q9Y6W3 813 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 COLEC10Q9Y6Z7 277 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 BPTFQ12830 3046 aa6.04□□□□□ -1.44
LIG3-206ENST00000586058 A0A1W2PPC4 97 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 ANTXRLA6NF34 631 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 ARHGEF33A8MVX0 844 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 GFYI3L273 518 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 MATN2O00339 956 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 AXIN1O15169 862 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 SLC22A2O15244 555 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 LAMTOR5O43504 91 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 LATO43561 262 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 RGS14O43566 566 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 PI15O43692 258 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 UGDHO60701 494 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 OR4F21O95013 312 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 CCNDBP1O95273 360 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 CLDN9O95484 217 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 THEGLP0DJG4 465 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 ESRRAP11474 423 aaPredicted RBP6.03□□□□□ -1.44
LIG3-206ENST00000586058 MTHFD2P13995 350 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 PCSK2P16519 638 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms