RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 ASPMQ8IZT6 3477 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 MYO1GB0I1T2 1018 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 KERAO60938 352 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 ATP1B2P14415 290 aaPredicted RBP10.06□□□□□ -0.8
RFFL-212ENST00000584655 AK4P27144 223 aaPredicted RBP10.06□□□□□ -0.8
RFFL-212ENST00000584655 GJA4P35212 333 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 GTF2H3Q13889 308 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 TTLL9Q3SXZ7 439 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 FAM129CQ86XR2 697 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 ARMC5Q96C12 935 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 DCLRE1BQ9H816 532 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 PCDHGB4Q9UN71 923 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 PDE10AQ9Y233 779 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 PCDHGB5Q9Y5G0 923 aa10.06□□□□□ -0.8
RFFL-212ENST00000584655 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.05□□□□□ -0.8
RFFL-212ENST00000584655 EPOP01588 193 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 HTR7P34969 479 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 SLC18A1P54219 525 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 SLC7A9P82251 487 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 MMP21Q8N119 569 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 OR10A6Q8NH74 314 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 MCOLN3Q8TDD5 553 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 CYGBQ8WWM9 190 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 FCRL4Q96PJ5 515 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 DPH2Q9BQC3 489 aaPredicted RBP10.05□□□□□ -0.8
RFFL-212ENST00000584655 DPY30Q9C005 99 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 PRDM16Q9HAZ2 1276 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 TARM1B6A8C7 271 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 ZNF197O14709 1029 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 KLF11O14901 512 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 WNT9AO14904 365 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 PPM1DO15297 605 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 KIF1CO43896 1103 aaKnown RBP10.05□□□□□ -0.8
RFFL-212ENST00000584655 PAX3P23760 479 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 CLCN7P51798 805 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 NFKB2Q00653 900 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 SGCGQ13326 291 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 KLHDC10Q6PID8 442 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 RGL4Q8IZJ4 473 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 SFRP1Q8N474 314 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 OR5AR1Q8NGP9 310 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 CANT1Q8WVQ1 401 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 OR8D1Q8WZ84 308 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 INPP5DQ92835 1189 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 TSACCQ96A04 125 aaPredicted RBP10.05□□□□□ -0.8
RFFL-212ENST00000584655 SYNDIG1Q9H7V2 258 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 TMPRSS11EQ9UL52 423 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 RSL1D1O76021 490 aaKnown RBP10.05□□□□□ -0.8
RFFL-212ENST00000584655 OPN1SWP03999 348 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 ME2P23368 584 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 NSG1P42857 185 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 ST13P50502 369 aaKnown RBP10.05□□□□□ -0.8
RFFL-212ENST00000584655 HK2P52789 917 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 SLC34A1Q06495 639 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 HKDC1Q2TB90 917 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 RNF168Q8IYW5 571 aaPredicted RBP10.05□□□□□ -0.8
RFFL-212ENST00000584655 OFCC1Q8IZS5 231 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 JADE3Q92613 823 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 COL26A1Q96A83 441 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 MAGEE1Q9HCI5 957 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 LTB4R2Q9NPC1 389 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 AASSQ9UDR5 926 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 PCTPQ9UKL6 214 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 MED12Q93074 2177 aa10.05□□□□□ -0.8
RFFL-212ENST00000584655 TMEM114B3SHH9 223 aa10.04□□□□□ -0.8
RFFL-212ENST00000584655 E7EQ34 232 aa10.04□□□□□ -0.8
RFFL-212ENST00000584655 GAPDHSO14556 408 aaPredicted RBP10.04□□□□□ -0.8
RFFL-212ENST00000584655 DFNA5O60443 496 aa10.04□□□□□ -0.8
RFFL-212ENST00000584655 EFCAB14O75071 495 aa10.04□□□□□ -0.8
RFFL-212ENST00000584655 TPD52P55327 224 aaPredicted RBP10.04□□□□□ -0.8
RFFL-212ENST00000584655 ZNF33AQ06730 810 aa10.04□□□□□ -0.8
RFFL-212ENST00000584655 CYP4F3Q08477 520 aa10.04□□□□□ -0.8
RFFL-212ENST00000584655 CCNIQ14094 377 aa10.04□□□□□ -0.8
RFFL-212ENST00000584655 SELPLGQ14242 412 aa10.04□□□□□ -0.8
RFFL-212ENST00000584655 RNF220Q5VTB9 566 aa10.04□□□□□ -0.8
RFFL-212ENST00000584655 CNTN4Q8IWV2 1026 aa10.04□□□□□ -0.8
RFFL-212ENST00000584655 PPP1R2P1Q96PQ5 205 aa10.04□□□□□ -0.8
RFFL-212ENST00000584655 CENPKQ9BS16 269 aa10.04□□□□□ -0.8
RFFL-212ENST00000584655 MBNL1Q9NR56 388 aaKnown RBP10.04□□□□□ -0.8
RFFL-212ENST00000584655 DNAJC28Q9NX36 388 aa10.04□□□□□ -0.8
RFFL-212ENST00000584655 TBC1D14Q9P2M4 693 aa10.04□□□□□ -0.8
RFFL-212ENST00000584655 CNOT6Q9ULM6 557 aaKnown RBP10.04□□□□□ -0.8
RFFL-212ENST00000584655 DHRS7Q9Y394 339 aa10.04□□□□□ -0.8
RFFL-212ENST00000584655 IFRD1O00458 451 aaPredicted RBP10.04□□□□□ -0.8
RFFL-212ENST00000584655 FBP2O00757 339 aa10.04□□□□□ -0.8
RFFL-212ENST00000584655 TSPAN12O95859 305 aa10.04□□□□□ -0.8
RFFL-212ENST00000584655 OGNP20774 298 aaKnown RBP10.04□□□□□ -0.8
RFFL-212ENST00000584655 MC1RQ01726 317 aa10.04□□□□□ -0.8
RFFL-212ENST00000584655 RUNX3Q13761 415 aa10.04□□□□□ -0.8
RFFL-212ENST00000584655 PLCL1Q15111 1095 aa10.04□□□□□ -0.8
RFFL-212ENST00000584655 SFT2D3Q587I9 215 aa10.04□□□□□ -0.8
RFFL-212ENST00000584655 SBSNQ6UWP8 590 aa10.04□□□□□ -0.8
RFFL-212ENST00000584655 LIPIQ6XZB0 460 aa10.04□□□□□ -0.8
RFFL-212ENST00000584655 ADAMTSL2Q86TH1 951 aa10.04□□□□□ -0.8
RFFL-212ENST00000584655 AHI1Q8N157 1196 aa10.04□□□□□ -0.8
RFFL-212ENST00000584655 FBXW8Q8N3Y1 598 aa10.04□□□□□ -0.8
RFFL-212ENST00000584655 PATE1Q8WXA2 126 aa10.04□□□□□ -0.8
RFFL-212ENST00000584655 TPD52L3Q96J77 140 aa10.04□□□□□ -0.8
RFFL-212ENST00000584655 TRMT61BQ9BVS5 477 aaKnown RBP10.04□□□□□ -0.8
RFFL-212ENST00000584655 CFHR5Q9BXR6 569 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms