RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 ZFC3H1O60293 1989 aaKnown RBP15.94■□□□□ 0.14
CDK5RAP3-228ENST00000583363 CEP295Q9C0D2 2601 aa15.93■□□□□ 0.14
CDK5RAP3-228ENST00000583363 SYCE1LA8MT33 242 aa15.93■□□□□ 0.14
CDK5RAP3-228ENST00000583363 ARHGEF33A8MVX0 844 aa15.93■□□□□ 0.14
CDK5RAP3-228ENST00000583363 LMO7DNF2Z398 122 aa15.93■□□□□ 0.14
CDK5RAP3-228ENST00000583363 G3V2L1 256 aa15.93■□□□□ 0.14
CDK5RAP3-228ENST00000583363 TK2O00142 265 aa15.93■□□□□ 0.14
CDK5RAP3-228ENST00000583363 KHNYNO15037 678 aaKnown RBP15.93■□□□□ 0.14
CDK5RAP3-228ENST00000583363 CATP04040 527 aaKnown RBP15.93■□□□□ 0.14
CDK5RAP3-228ENST00000583363 ENO2P09104 434 aaPredicted RBP15.93■□□□□ 0.14
CDK5RAP3-228ENST00000583363 F3P13726 295 aa15.93■□□□□ 0.14
CDK5RAP3-228ENST00000583363 MTHFD2P13995 350 aa15.93■□□□□ 0.14
CDK5RAP3-228ENST00000583363 CPA3P15088 417 aa15.93■□□□□ 0.14
CDK5RAP3-228ENST00000583363 CYP2A7P20853 494 aa15.93■□□□□ 0.14
CDK5RAP3-228ENST00000583363 HALP42357 657 aa15.93■□□□□ 0.14
CDK5RAP3-228ENST00000583363 RPIAP49247 311 aa15.93■□□□□ 0.14
CDK5RAP3-228ENST00000583363 PHKG1Q16816 387 aa15.93■□□□□ 0.14
CDK5RAP3-228ENST00000583363 SLC25A45Q8N413 288 aa15.93■□□□□ 0.14
CDK5RAP3-228ENST00000583363 ARFGAP2Q8N6H7 521 aa15.93■□□□□ 0.14
CDK5RAP3-228ENST00000583363 FBXO15Q8NCQ5 510 aaPredicted RBP15.93■□□□□ 0.14
CDK5RAP3-228ENST00000583363 FAM46DQ8NEK8 389 aa15.93■□□□□ 0.14
CDK5RAP3-228ENST00000583363 RDH11Q8TC12 318 aa15.93■□□□□ 0.14
CDK5RAP3-228ENST00000583363 MCOLN3Q8TDD5 553 aa15.93■□□□□ 0.14
CDK5RAP3-228ENST00000583363 NUSAP1Q9BXS6 441 aaKnown RBP15.93■□□□□ 0.14
CDK5RAP3-228ENST00000583363 TRIM54Q9BYV2 358 aa15.93■□□□□ 0.14
CDK5RAP3-228ENST00000583363 GAREM1Q9H706 876 aa15.93■□□□□ 0.14
CDK5RAP3-228ENST00000583363 CNOT10Q9H9A5 744 aaKnown RBP15.93■□□□□ 0.14
CDK5RAP3-228ENST00000583363 UCKL1Q9NWZ5 548 aa15.93■□□□□ 0.14
CDK5RAP3-228ENST00000583363 ZNF624Q9P2J8 865 aaPredicted RBP15.93■□□□□ 0.14
CDK5RAP3-228ENST00000583363 RALYQ9UKM9 306 aaKnown RBP15.93■□□□□ 0.14
CDK5RAP3-228ENST00000583363 ASF1AQ9Y294 204 aa15.93■□□□□ 0.14
CDK5RAP3-228ENST00000583363 CFAP20Q9Y6A4 193 aaKnown RBP15.93■□□□□ 0.14
CDK5RAP3-228ENST00000583363 ARHGEF17Q96PE2 2063 aaPredicted RBP15.93■□□□□ 0.14
CDK5RAP3-228ENST00000583363 TRBV23OR9-2A0A075B6M9 112 aa15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 OR5K4A6NMS3 321 aa15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 UBXN8O00124 270 aa15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 KLK8O60259 260 aa15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 DLX3O60479 287 aa15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 SDC3O75056 442 aa15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 ANXA6P08133 673 aa15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 HIST1H2AGP0C0S8 130 aaPredicted RBP15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 TPBGLP0DKB5 382 aa15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 CHN1P15882 459 aa15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 XRCC1P18887 633 aaPredicted RBP15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 HIST1H2ADP20671 130 aa15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 MAP4P27816 1152 aaKnown RBP15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 SLC19A1P41440 591 aa15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 CDKL1Q00532 357 aa15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 TGFBIQ15582 683 aa15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 HHATQ5VTY9 493 aa15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 OGFOD3Q6PK18 319 aa15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 ZYG11AQ6WRX3 759 aa15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 KANSL1Q7Z3B3 1105 aa15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 TBC1D21Q8IYX1 336 aa15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 CCDC63Q8NA47 563 aa15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 OR5K2Q8NHB8 316 aa15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 FAM76AQ8TAV0 307 aa15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 MAGEC3Q8TD91 643 aa15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 MGARPQ8TDB4 240 aa15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 ZDHHC1Q8WTX9 485 aa15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 HIST1H2AHQ96KK5 128 aa15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 FERD3LQ96RJ6 166 aa15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 HIST1H2AJQ99878 128 aa15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 H2AFJQ9BTM1 129 aa15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 TRIT1Q9H3H1 467 aaKnown RBP15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 MVB12BQ9H7P6 319 aa15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 IL21RQ9HBE5 538 aa15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 MLXIPLQ9NP71 852 aa15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 COPG2Q9UBF2 871 aa15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 MID2Q9UJV3 735 aa15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 DOLKQ9UPQ8 538 aa15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 HEBP2Q9Y5Z4 205 aa15.92■□□□□ 0.14
CDK5RAP3-228ENST00000583363 OR52A4PA6NMU1 304 aa15.91■□□□□ 0.14
CDK5RAP3-228ENST00000583363 YKT6O15498 198 aa15.91■□□□□ 0.14
CDK5RAP3-228ENST00000583363 FFAR2O15552 330 aa15.91■□□□□ 0.14
CDK5RAP3-228ENST00000583363 RPN2P04844 631 aa15.91■□□□□ 0.14
CDK5RAP3-228ENST00000583363 BPGMP07738 259 aa15.91■□□□□ 0.14
CDK5RAP3-228ENST00000583363 MYL2P10916 166 aa15.91■□□□□ 0.14
CDK5RAP3-228ENST00000583363 MTHFD1P11586 935 aaKnown RBP15.91■□□□□ 0.14
CDK5RAP3-228ENST00000583363 SLC2A4P14672 509 aa15.91■□□□□ 0.14
CDK5RAP3-228ENST00000583363 TAC1P20366 129 aa15.91■□□□□ 0.14
CDK5RAP3-228ENST00000583363 ATP5F1P24539 256 aaPredicted RBP15.91■□□□□ 0.14
CDK5RAP3-228ENST00000583363 BDKRB1P46663 353 aa15.91■□□□□ 0.14
CDK5RAP3-228ENST00000583363 SERPINB4P48594 390 aa15.91■□□□□ 0.14
CDK5RAP3-228ENST00000583363 ATP1A2P50993 1020 aa15.91■□□□□ 0.14
CDK5RAP3-228ENST00000583363 CCSMST1Q4G0I0 132 aa15.91■□□□□ 0.14
CDK5RAP3-228ENST00000583363 CDKL4Q5MAI5 379 aa15.91■□□□□ 0.14
CDK5RAP3-228ENST00000583363 FRA10AC1Q70Z53 315 aa15.91■□□□□ 0.14
CDK5RAP3-228ENST00000583363 NAGSQ8N159 534 aa15.91■□□□□ 0.14
CDK5RAP3-228ENST00000583363 OR5AR1Q8NGP9 310 aa15.91■□□□□ 0.14
CDK5RAP3-228ENST00000583363 SAP25Q8TEE9 199 aa15.91■□□□□ 0.14
CDK5RAP3-228ENST00000583363 CCDC138Q96M89 665 aa15.91■□□□□ 0.14
CDK5RAP3-228ENST00000583363 PKP4Q99569 1192 aa15.91■□□□□ 0.14
CDK5RAP3-228ENST00000583363 PAIP2Q9BPZ3 127 aaKnown RBP15.91■□□□□ 0.14
CDK5RAP3-228ENST00000583363 EDEM2Q9BV94 578 aa15.91■□□□□ 0.14
CDK5RAP3-228ENST00000583363 IMP3Q9NV31 184 aaKnown RBP15.91■□□□□ 0.14
CDK5RAP3-228ENST00000583363 UTP6Q9NYH9 597 aaKnown RBP15.91■□□□□ 0.14
CDK5RAP3-228ENST00000583363 NUDT4Q9NZJ9 180 aa15.91■□□□□ 0.14
CDK5RAP3-228ENST00000583363 TMCO1Q9UM00 188 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms