RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 CREG1O75629 220 aa2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 RAF1P04049 648 aa2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 VPREB1P12018 145 aa2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 CEBPBP17676 345 aa2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 GABRA5P31644 462 aa2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 RXRGP48443 463 aa2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 CX3CL1P78423 397 aa2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 MC1RQ01726 317 aa2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 CDR2Q01850 454 aa2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 CXCL9Q07325 125 aa2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 TMCO3Q6UWJ1 677 aa2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 Q6ZSR9 355 aa2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 SZRD1Q7Z422 152 aa2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 LDB1Q86U70 411 aaPredicted RBP2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 C17orf53Q8N3J3 647 aaPredicted RBP2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 FBXO39Q8N4B4 442 aa2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 TMEM178AQ8NBL3 297 aa2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 OR2T11Q8NH01 316 aa2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 MRGPRDQ8TDS7 321 aa2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 RNF128Q8TEB7 428 aa2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 FAM120BQ96EK7 910 aaKnown RBP2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 CCDC34Q96HJ3 373 aa2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 TIGD1Q96MW7 591 aa2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 AGAP3Q96P47 875 aa2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 FNDC11Q9BVV2 318 aa2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 VN1R1Q9GZP7 353 aa2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 LAT2Q9GZY6 243 aa2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 DPAGT1Q9H3H5 408 aa2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 KCNK15Q9H427 330 aa2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 INTS9Q9NV88 658 aaKnown RBP2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 ARHGEF38Q9NXL2 777 aa2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 SUCLA2Q9P2R7 463 aaPredicted RBP2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 OSGIN1Q9UJX0 560 aa2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 ZHX1Q9UKY1 873 aaPredicted RBP2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 ZNF148Q9UQR1 794 aa2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 LAS1LQ9Y4W2 734 aaKnown RBP2.87□□□□□ -1.95
SMCHD1-206ENST00000581631 A0A087WW49 117 aa2.86□□□□□ -1.95
SMCHD1-206ENST00000581631 LOC101059948A0A1B0GTJ6 334 aa2.86□□□□□ -1.95
SMCHD1-206ENST00000581631 HYKKA2RU49 373 aa2.86□□□□□ -1.95
SMCHD1-206ENST00000581631 OR2A25A4D2G3 310 aa2.86□□□□□ -1.95
SMCHD1-206ENST00000581631 AGAP14A8MT82 685 aa2.86□□□□□ -1.95
SMCHD1-206ENST00000581631 HEPACAM2A8MVW5 462 aa2.86□□□□□ -1.95
SMCHD1-206ENST00000581631 GAPDHSO14556 408 aaPredicted RBP2.86□□□□□ -1.95
SMCHD1-206ENST00000581631 XRCC3O43542 346 aa2.86□□□□□ -1.95
SMCHD1-206ENST00000581631 CDC123O75794 336 aaPredicted RBP2.86□□□□□ -1.95
SMCHD1-206ENST00000581631 AP2A2O94973 939 aa2.86□□□□□ -1.95
SMCHD1-206ENST00000581631 PIGNO95427 931 aa2.86□□□□□ -1.95
SMCHD1-206ENST00000581631 EFNA1P20827 205 aaPredicted RBP2.86□□□□□ -1.95
SMCHD1-206ENST00000581631 GCH1P30793 250 aa2.86□□□□□ -1.95
SMCHD1-206ENST00000581631 SLC6A12P48065 614 aa2.86□□□□□ -1.95
SMCHD1-206ENST00000581631 PNLIPRP2P54317 469 aa2.86□□□□□ -1.95
SMCHD1-206ENST00000581631 B3GALT5-AS1P59052 145 aa2.86□□□□□ -1.95
SMCHD1-206ENST00000581631 CREB5Q02930 508 aa2.86□□□□□ -1.95
SMCHD1-206ENST00000581631 DUSP28Q4G0W2 176 aa2.86□□□□□ -1.95
SMCHD1-206ENST00000581631 MDH1BQ5I0G3 518 aa2.86□□□□□ -1.95
SMCHD1-206ENST00000581631 TRIM65Q6PJ69 517 aa2.86□□□□□ -1.95
SMCHD1-206ENST00000581631 FIGLAQ6QHK4 219 aa2.86□□□□□ -1.95
SMCHD1-206ENST00000581631 LINGO4Q6UY18 593 aa2.86□□□□□ -1.95
SMCHD1-206ENST00000581631 C4orf50Q6ZRC1 276 aa2.86□□□□□ -1.95
SMCHD1-206ENST00000581631 OR4C3Q8NH37 302 aa2.86□□□□□ -1.95
SMCHD1-206ENST00000581631 BARD1Q99728 777 aaKnown RBP2.86□□□□□ -1.95
SMCHD1-206ENST00000581631 POLR3GLQ9BT43 218 aa2.86□□□□□ -1.95
SMCHD1-206ENST00000581631 SPATC1LQ9H0A9 340 aa2.86□□□□□ -1.95
SMCHD1-206ENST00000581631 S1PR5Q9H228 398 aa2.86□□□□□ -1.95
SMCHD1-206ENST00000581631 ARRDC1-AS1Q9H2J1 176 aa2.86□□□□□ -1.95
SMCHD1-206ENST00000581631 HAUS2Q9NVX0 235 aa2.86□□□□□ -1.95
SMCHD1-206ENST00000581631 WSB2Q9NYS7 404 aaPredicted RBP2.86□□□□□ -1.95
SMCHD1-206ENST00000581631 FLRT3Q9NZU0 649 aa2.86□□□□□ -1.95
SMCHD1-206ENST00000581631 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.86□□□□□ -1.95
SMCHD1-206ENST00000581631 ITIH6Q6UXX5 1313 aa2.86□□□□□ -1.95
SMCHD1-206ENST00000581631 IGLV7-46A0A075B6I9 117 aa2.85□□□□□ -1.95
SMCHD1-206ENST00000581631 FSD2A1L4K1 749 aa2.85□□□□□ -1.95
SMCHD1-206ENST00000581631 A6NCN8 305 aa2.85□□□□□ -1.95
SMCHD1-206ENST00000581631 PRKRAO75569 313 aaKnown RBP2.85□□□□□ -1.95
SMCHD1-206ENST00000581631 GJB3O75712 270 aa2.85□□□□□ -1.95
SMCHD1-206ENST00000581631 CA4P22748 312 aa2.85□□□□□ -1.95
SMCHD1-206ENST00000581631 ACSL1P33121 698 aa2.85□□□□□ -1.95
SMCHD1-206ENST00000581631 ARSEP51690 589 aa2.85□□□□□ -1.95
SMCHD1-206ENST00000581631 PDX1P52945 283 aa2.85□□□□□ -1.95
SMCHD1-206ENST00000581631 TPD52P55327 224 aaPredicted RBP2.85□□□□□ -1.95
SMCHD1-206ENST00000581631 GEMIN4P57678 1058 aaKnown RBP2.85□□□□□ -1.95
SMCHD1-206ENST00000581631 SIRPAP78324 504 aa2.85□□□□□ -1.95
SMCHD1-206ENST00000581631 HNRNPDQ14103 355 aaKnown RBP2.85□□□□□ -1.95
SMCHD1-206ENST00000581631 TAF13Q15543 124 aa2.85□□□□□ -1.95
SMCHD1-206ENST00000581631 IGSF11Q5DX21 431 aa2.85□□□□□ -1.95
SMCHD1-206ENST00000581631 PLEKHS1Q5SXH7 462 aa2.85□□□□□ -1.95
SMCHD1-206ENST00000581631 TEX38Q6PEX7 206 aa2.85□□□□□ -1.95
SMCHD1-206ENST00000581631 Q6ZR54 194 aa2.85□□□□□ -1.95
SMCHD1-206ENST00000581631 KBTBD6Q86V97 674 aa2.85□□□□□ -1.95
SMCHD1-206ENST00000581631 PIGZQ86VD9 579 aa2.85□□□□□ -1.95
SMCHD1-206ENST00000581631 COMMD2Q86X83 199 aa2.85□□□□□ -1.95
SMCHD1-206ENST00000581631 CFAP206Q8IYR0 622 aa2.85□□□□□ -1.95
SMCHD1-206ENST00000581631 MAPKAPK5-AS1Q8N8E1 139 aa2.85□□□□□ -1.95
SMCHD1-206ENST00000581631 TRIML1Q8N9V2 468 aa2.85□□□□□ -1.95
SMCHD1-206ENST00000581631 PPFIBP2Q8ND30 876 aa2.85□□□□□ -1.95
SMCHD1-206ENST00000581631 OR5M8Q8NGP6 311 aa2.85□□□□□ -1.95
SMCHD1-206ENST00000581631 OR13J1Q8NGT2 312 aa2.85□□□□□ -1.95
SMCHD1-206ENST00000581631 HPSE2Q8WWQ2 592 aa2.85□□□□□ -1.95
SMCHD1-206ENST00000581631 CDRT15Q96T59 188 aa2.85□□□□□ -1.95
SMCHD1-206ENST00000581631 TBC1D17Q9HA65 648 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms