RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 RBMXL3Q8N7X1 1067 aaKnown RBP8.64□□□□□ -1.03
GGA3-207ENST00000578896 C19orf47Q8N9M1 422 aaKnown RBP8.64□□□□□ -1.03
GGA3-207ENST00000578896 Q8NA96 180 aa8.64□□□□□ -1.03
GGA3-207ENST00000578896 OR52K1Q8NGK4 314 aa8.64□□□□□ -1.03
GGA3-207ENST00000578896 OR8K5Q8NH50 307 aa8.64□□□□□ -1.03
GGA3-207ENST00000578896 ATG4AQ8WYN0 398 aa8.64□□□□□ -1.03
GGA3-207ENST00000578896 ELMO1Q92556 727 aa8.64□□□□□ -1.03
GGA3-207ENST00000578896 C19orf60Q96EN9 201 aa8.64□□□□□ -1.03
GGA3-207ENST00000578896 LRFN5Q96NI6 719 aa8.64□□□□□ -1.03
GGA3-207ENST00000578896 OR2A14Q96R47 310 aa8.64□□□□□ -1.03
GGA3-207ENST00000578896 DESI2Q9BSY9 194 aa8.64□□□□□ -1.03
GGA3-207ENST00000578896 PITPNM3Q9BZ71 974 aa8.64□□□□□ -1.03
GGA3-207ENST00000578896 MVB12BQ9H7P6 319 aa8.64□□□□□ -1.03
GGA3-207ENST00000578896 LRRC4CQ9HCJ2 640 aa8.64□□□□□ -1.03
GGA3-207ENST00000578896 DHCR7Q9UBM7 475 aaKnown RBP8.64□□□□□ -1.03
GGA3-207ENST00000578896 SERTAD3Q9UJW9 196 aa8.64□□□□□ -1.03
GGA3-207ENST00000578896 CDYLQ9Y232 598 aa8.64□□□□□ -1.03
GGA3-207ENST00000578896 ASF1AQ9Y294 204 aa8.64□□□□□ -1.03
GGA3-207ENST00000578896 EFR3BQ9Y2G0 817 aa8.64□□□□□ -1.03
GGA3-207ENST00000578896 MAP4K5Q9Y4K4 846 aa8.64□□□□□ -1.03
GGA3-207ENST00000578896 PCM1Q15154 2024 aa8.64□□□□□ -1.03
GGA3-207ENST00000578896 DOPEY1Q5JWR5 2465 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 KLHL33A6NCF5 533 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 IQCF5A8MTL0 148 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 BHMG1C9JSJ3 638 aaPredicted RBP8.63□□□□□ -1.03
GGA3-207ENST00000578896 H7C0S8 307 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 CNOT3O75175 753 aaKnown RBP8.63□□□□□ -1.03
GGA3-207ENST00000578896 CEACAM4O75871 244 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 SORBS2O94875 1100 aaKnown RBP8.63□□□□□ -1.03
GGA3-207ENST00000578896 AGFG2O95081 481 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 CHRM5P08912 532 aaPredicted RBP8.63□□□□□ -1.03
GGA3-207ENST00000578896 ETS1P14921 441 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 MSNP26038 577 aaKnown RBP8.63□□□□□ -1.03
GGA3-207ENST00000578896 ACADLP28330 430 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 PEBP1P30086 187 aaKnown RBP8.63□□□□□ -1.03
GGA3-207ENST00000578896 FOXN2P32314 431 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 CETN2P41208 172 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 GABRA4P48169 554 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 CD151P48509 253 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 VAV2P52735 878 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 CACNG1Q06432 222 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 NCF4Q15080 339 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 C4orf17Q53FE4 359 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 ZNF385CQ66K41 422 aaPredicted RBP8.63□□□□□ -1.03
GGA3-207ENST00000578896 JMJD6Q6NYC1 403 aaPredicted RBP8.63□□□□□ -1.03
GGA3-207ENST00000578896 PEX26Q7Z412 305 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 KIAA1328Q86T90 577 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 LDB1Q86U70 411 aaPredicted RBP8.63□□□□□ -1.03
GGA3-207ENST00000578896 TAX1BP1Q86VP1 789 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 HOOK3Q86VS8 718 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 TMTC1Q8IUR5 882 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 CARFQ8N187 725 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 ZNF655Q8N720 491 aaPredicted RBP8.63□□□□□ -1.03
GGA3-207ENST00000578896 CFAP61Q8NHU2 1237 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 FLVCR1-AS1Q8TAF5 88 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 LKAAEAR1Q8TD35 194 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 STYXQ8WUJ0 223 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 HEXDCQ8WVB3 486 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 SEC14L1Q92503 715 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 N4BP2L2Q92802 583 aaPredicted RBP8.63□□□□□ -1.03
GGA3-207ENST00000578896 HDAC10Q969S8 669 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 ZNF778Q96MU6 729 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 IL17FQ96PD4 163 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 ALS2CR12Q96Q35 445 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 PANX2Q96RD6 677 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 RBSNQ9H1K0 784 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 LRRC40Q9H9A6 602 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 LUC7LQ9NQ29 371 aaKnown RBP8.63□□□□□ -1.03
GGA3-207ENST00000578896 IRAK4Q9NWZ3 460 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 AMFRQ9UKV5 643 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 PTRH2Q9Y3E5 179 aaKnown RBP8.63□□□□□ -1.03
GGA3-207ENST00000578896 PCDHGA9Q9Y5G4 932 aaKnown RBP8.63□□□□□ -1.03
GGA3-207ENST00000578896 PCNX1Q96RV3 2341 aa8.63□□□□□ -1.03
GGA3-207ENST00000578896 MYO7BQ6PIF6 2116 aa8.62□□□□□ -1.03
GGA3-207ENST00000578896 SLC5A10A0PJK1 596 aa8.62□□□□□ -1.03
GGA3-207ENST00000578896 A1L4Q6 167 aa8.62□□□□□ -1.03
GGA3-207ENST00000578896 MROH6A6NGR9 719 aa8.62□□□□□ -1.03
GGA3-207ENST00000578896 ISM1B1AKI9 464 aa8.62□□□□□ -1.03
GGA3-207ENST00000578896 TCP11X1B4DZS4 312 aa8.62□□□□□ -1.03
GGA3-207ENST00000578896 H3BMH7 237 aa8.62□□□□□ -1.03
GGA3-207ENST00000578896 MATN2O00339 956 aa8.62□□□□□ -1.03
GGA3-207ENST00000578896 ALOX12BO75342 701 aa8.62□□□□□ -1.03
GGA3-207ENST00000578896 KLF7O75840 302 aaPredicted RBP8.62□□□□□ -1.03
GGA3-207ENST00000578896 OR2B3O76000 313 aa8.62□□□□□ -1.03
GGA3-207ENST00000578896 AP2A2O94973 939 aa8.62□□□□□ -1.03
GGA3-207ENST00000578896 AP2A1O95782 977 aa8.62□□□□□ -1.03
GGA3-207ENST00000578896 GOT2P00505 430 aaKnown RBP8.62□□□□□ -1.03
GGA3-207ENST00000578896 RPA4Q13156 261 aa8.62□□□□□ -1.03
GGA3-207ENST00000578896 KLF1Q13351 362 aaPredicted RBP8.62□□□□□ -1.03
GGA3-207ENST00000578896 SEMA3AQ14563 771 aa8.62□□□□□ -1.03
GGA3-207ENST00000578896 PLEKHN1Q494U1 663 aaPredicted RBP8.62□□□□□ -1.03
GGA3-207ENST00000578896 SYTL3Q4VX76 610 aa8.62□□□□□ -1.03
GGA3-207ENST00000578896 FHL5Q5TD97 284 aa8.62□□□□□ -1.03
GGA3-207ENST00000578896 PAPD7Q5XG87 772 aaKnown RBP8.62□□□□□ -1.03
GGA3-207ENST00000578896 SLC6A19Q695T7 634 aa8.62□□□□□ -1.03
GGA3-207ENST00000578896 ZNF449Q6P9G9 518 aa8.62□□□□□ -1.03
GGA3-207ENST00000578896 VRK3Q8IV63 474 aa8.62□□□□□ -1.03
GGA3-207ENST00000578896 GPR135Q8IZ08 494 aa8.62□□□□□ -1.03
GGA3-207ENST00000578896 KRT222Q8N1A0 295 aa8.62□□□□□ -1.03
GGA3-207ENST00000578896 DTWD1Q8N5C7 304 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms