RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 KYQ8NBH2 561 aa10.99□□□□□ -0.65
CDK5RAP3-210ENST00000578733 FBXO15Q8NCQ5 510 aaPredicted RBP10.99□□□□□ -0.65
CDK5RAP3-210ENST00000578733 ACVR1CQ8NER5 493 aa10.99□□□□□ -0.65
CDK5RAP3-210ENST00000578733 STAG3L4Q8TBR4 150 aa10.99□□□□□ -0.65
CDK5RAP3-210ENST00000578733 ALKBH8Q96BT7 664 aaKnown RBP10.99□□□□□ -0.65
CDK5RAP3-210ENST00000578733 PGM2Q96G03 612 aa10.99□□□□□ -0.65
CDK5RAP3-210ENST00000578733 CNDP2Q96KP4 475 aaKnown RBP10.99□□□□□ -0.65
CDK5RAP3-210ENST00000578733 APOLD1Q96LR9 279 aa10.99□□□□□ -0.65
CDK5RAP3-210ENST00000578733 SMC6Q96SB8 1091 aa10.99□□□□□ -0.65
CDK5RAP3-210ENST00000578733 SLC38A3Q99624 504 aa10.99□□□□□ -0.65
CDK5RAP3-210ENST00000578733 TFB2MQ9H5Q4 396 aaKnown RBP10.99□□□□□ -0.65
CDK5RAP3-210ENST00000578733 KIR3DX1Q9H7L2 352 aa10.99□□□□□ -0.65
CDK5RAP3-210ENST00000578733 UCK1Q9HA47 277 aa10.99□□□□□ -0.65
CDK5RAP3-210ENST00000578733 PCMTD2Q9NV79 361 aa10.99□□□□□ -0.65
CDK5RAP3-210ENST00000578733 PADI4Q9UM07 663 aa10.99□□□□□ -0.65
CDK5RAP3-210ENST00000578733 NOVA2Q9UNW9 492 aaKnown RBP10.99□□□□□ -0.65
CDK5RAP3-210ENST00000578733 WDR37Q9Y2I8 494 aa10.99□□□□□ -0.65
CDK5RAP3-210ENST00000578733 TDRKHQ9Y2W6 561 aaKnown RBP10.99□□□□□ -0.65
CDK5RAP3-210ENST00000578733 CFAP20Q9Y6A4 193 aaKnown RBP10.99□□□□□ -0.65
CDK5RAP3-210ENST00000578733 TRBV23OR9-2A0A075B6M9 112 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 FAM221BA6H8Z2 402 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 PCNX2A6NKB5 2137 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 SYCE1LA8MT33 242 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 TRIM38O00635 465 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 COPEO14579 308 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 RFPL1O75677 317 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 MATN4O95460 622 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 EML2O95834 649 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 SYF2O95926 243 aaKnown RBP10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 RBP1P09455 135 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 GIMD1P0DJR0 217 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 PYGBP11216 843 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 CKMT1AP12532 417 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 CD59P13987 128 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 CD1DP15813 335 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 PNLIPP16233 465 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 HSD17B2P37059 387 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 SLC19A1P41440 591 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 GPR3P46089 330 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 EPHA4P54764 986 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 AP1S2P56377 157 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 UBE2IP63279 158 aaKnown RBP10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 SHC2P98077 582 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 TMEM26Q6ZUK4 368 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 TRABD2AQ86V40 505 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 C17orf82Q86X59 251 aaPredicted RBP10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 SLC35F3Q8IY50 421 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 SPDYE1Q8NFV5 336 aaPredicted RBP10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 MZB1Q8WU39 189 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 ATL1Q8WXF7 558 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 ASB11Q8WXH4 323 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 SCYL1Q96KG9 808 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 UBXN10Q96LJ8 280 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 SLC12A9Q9BXP2 914 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 ZMYND15Q9H091 742 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 EPB41L1Q9H4G0 881 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 PARVBQ9HBI1 364 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 SCHIP1Q9P0W5 487 aaPredicted RBP10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 SPATA7Q9P0W8 599 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 ZNF624Q9P2J8 865 aaPredicted RBP10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 LRIT1Q9P2V4 623 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 LNPEPQ9UIQ6 1025 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 MID2Q9UJV3 735 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 TMCO1Q9UM00 188 aa10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 RUVBL2Q9Y230 463 aaKnown RBP10.98□□□□□ -0.65
CDK5RAP3-210ENST00000578733 FAM208BQ5VWN6 2430 aa10.97□□□□□ -0.65
CDK5RAP3-210ENST00000578733 CPED1A4D0V7 1026 aa10.97□□□□□ -0.65
CDK5RAP3-210ENST00000578733 EME2A4GXA9 379 aaPredicted RBP10.97□□□□□ -0.65
CDK5RAP3-210ENST00000578733 LILRA5A6NI73 299 aa10.97□□□□□ -0.65
CDK5RAP3-210ENST00000578733 GFYI3L273 518 aa10.97□□□□□ -0.65
CDK5RAP3-210ENST00000578733 MATN2O00339 956 aa10.97□□□□□ -0.65
CDK5RAP3-210ENST00000578733 SH3BP5O60239 455 aa10.97□□□□□ -0.65
CDK5RAP3-210ENST00000578733 GDF9O60383 454 aa10.97□□□□□ -0.65
CDK5RAP3-210ENST00000578733 WISP3O95389 354 aaPredicted RBP10.97□□□□□ -0.65
CDK5RAP3-210ENST00000578733 C1orf105O95561 183 aa10.97□□□□□ -0.65
CDK5RAP3-210ENST00000578733 TSPAN12O95859 305 aa10.97□□□□□ -0.65
CDK5RAP3-210ENST00000578733 CDK4P11802 303 aa10.97□□□□□ -0.65
CDK5RAP3-210ENST00000578733 CKMT2P17540 419 aa10.97□□□□□ -0.65
CDK5RAP3-210ENST00000578733 KRT4P19013 534 aa10.97□□□□□ -0.65
CDK5RAP3-210ENST00000578733 SHMT2P34897 504 aa10.97□□□□□ -0.65
CDK5RAP3-210ENST00000578733 MAZP56270 477 aaKnown RBP10.97□□□□□ -0.65
CDK5RAP3-210ENST00000578733 PRKAA1Q13131 559 aa10.97□□□□□ -0.65
CDK5RAP3-210ENST00000578733 ILKQ13418 452 aa10.97□□□□□ -0.65
CDK5RAP3-210ENST00000578733 PROX2Q3B8N5 592 aa10.97□□□□□ -0.65
CDK5RAP3-210ENST00000578733 HSP90B2PQ58FF3 399 aa10.97□□□□□ -0.65
CDK5RAP3-210ENST00000578733 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.97□□□□□ -0.65
CDK5RAP3-210ENST00000578733 DUS1LQ6P1R4 473 aaKnown RBP10.97□□□□□ -0.65
CDK5RAP3-210ENST00000578733 TMEM207Q6UWW9 146 aa10.97□□□□□ -0.65
CDK5RAP3-210ENST00000578733 XKR5Q6UX68 686 aa10.97□□□□□ -0.65
CDK5RAP3-210ENST00000578733 CYHR1Q6ZMK1 362 aa10.97□□□□□ -0.65
CDK5RAP3-210ENST00000578733 SRRM1Q8IYB3 904 aaKnown RBP10.97□□□□□ -0.65
CDK5RAP3-210ENST00000578733 TCAIMQ8N3R3 496 aa10.97□□□□□ -0.65
CDK5RAP3-210ENST00000578733 OR5AR1Q8NGP9 310 aa10.97□□□□□ -0.65
CDK5RAP3-210ENST00000578733 WDR48Q8TAF3 677 aa10.97□□□□□ -0.65
CDK5RAP3-210ENST00000578733 RHEBL1Q8TAI7 183 aa10.97□□□□□ -0.65
CDK5RAP3-210ENST00000578733 KCTD4Q8WVF5 259 aa10.97□□□□□ -0.65
CDK5RAP3-210ENST00000578733 LCN9Q8WX39 176 aa10.97□□□□□ -0.65
CDK5RAP3-210ENST00000578733 PATE1Q8WXA2 126 aa10.97□□□□□ -0.65
CDK5RAP3-210ENST00000578733 KIAA1191Q96A73 305 aa10.97□□□□□ -0.65
CDK5RAP3-210ENST00000578733 AHCYL2Q96HN2 611 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms