RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 PDE5AO76074 875 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 MYO1DO94832 1006 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 PCDH8O95206 1070 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 ALDOCP09972 364 aaKnown RBP10.86□□□□□ -0.67
SKA2-204ENST00000578519 HSD3B1P14060 373 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 ACPPP15309 386 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 HSD3B2P26439 372 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 PRDX3P30048 256 aaKnown RBP10.86□□□□□ -0.67
SKA2-204ENST00000578519 HSD17B2P37059 387 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 P2RY2P41231 377 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 HALP42357 657 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 SLC6A12P48065 614 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 PTDSS1P48651 473 aaKnown RBP10.86□□□□□ -0.67
SKA2-204ENST00000578519 CLNS1AP54105 237 aaKnown RBP10.86□□□□□ -0.67
SKA2-204ENST00000578519 IRF8Q02556 426 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 BNIP2Q12982 314 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 SGCGQ13326 291 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 CAMK2GQ13555 558 aaPredicted RBP10.86□□□□□ -0.67
SKA2-204ENST00000578519 ENPP2Q13822 863 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 NFYCQ13952 458 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 TRIM25Q14258 630 aaKnown RBP10.86□□□□□ -0.67
SKA2-204ENST00000578519 AGERQ15109 404 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 CST6Q15828 149 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 ZNF423Q2M1K9 1284 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 AASDHQ4L235 1098 aaPredicted RBP10.86□□□□□ -0.67
SKA2-204ENST00000578519 CMPK2Q5EBM0 449 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 FBXO48Q5FWF7 155 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 ICE2Q659A1 982 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 UNC5DQ6UXZ4 953 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 LRRC74BQ6ZQY2 392 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 EP400NLQ6ZTU2 488 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 HPS6Q86YV9 775 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 TRAPPC5Q8IUR0 188 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 CFAP206Q8IYR0 622 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 AADATQ8N5Z0 425 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 GOLM1Q8NBJ4 401 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 OR2T3Q8NH03 318 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 GANCQ8TET4 914 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 SELENOMQ8WWX9 145 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 STARD8Q92502 1023 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 MARVELD3Q96A59 401 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 CCDC124Q96CT7 223 aaKnown RBP10.86□□□□□ -0.67
SKA2-204ENST00000578519 ASB9Q96DX5 294 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 SH3GL1Q99961 368 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 LRTM1Q9HBL6 345 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 FBRSL1Q9HCM7 1045 aaKnown RBP10.86□□□□□ -0.67
SKA2-204ENST00000578519 PRM3Q9NNZ6 103 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 ZDHHC4Q9NPG8 344 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 C1orf109Q9NX04 203 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 C6orf203Q9P0P8 240 aaPredicted RBP10.86□□□□□ -0.67
SKA2-204ENST00000578519 ZNF225Q9UK10 706 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 DYRK1BQ9Y463 629 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 LRRC42Q9Y546 428 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 KCNE2Q9Y6J6 123 aa10.86□□□□□ -0.67
SKA2-204ENST00000578519 OTOL1A6NHN0 477 aaPredicted RBP10.85□□□□□ -0.67
SKA2-204ENST00000578519 LSM1O15116 133 aaKnown RBP10.85□□□□□ -0.67
SKA2-204ENST00000578519 LINC01565O15544 149 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 KDM1AO60341 852 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 SEC22BO75396 215 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 MTX2O75431 263 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 EEDO75530 441 aaKnown RBP10.85□□□□□ -0.67
SKA2-204ENST00000578519 POP7O75817 140 aaKnown RBP10.85□□□□□ -0.67
SKA2-204ENST00000578519 RSL1D1O76021 490 aaKnown RBP10.85□□□□□ -0.67
SKA2-204ENST00000578519 DNTTP04053 509 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 IL6P05231 212 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 JUPP14923 745 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 ACADSP16219 412 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 GM2AP17900 193 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 DRD1P21728 446 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 NTSR1P30989 418 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 GALK1P51570 392 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 RPS21P63220 83 aaKnown RBP10.85□□□□□ -0.67
SKA2-204ENST00000578519 PHEXP78562 749 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 PCDH1Q08174 1060 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 CNTN1Q12860 1018 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 CSTF3Q12996 717 aaKnown RBP10.85□□□□□ -0.67
SKA2-204ENST00000578519 LAPTM5Q13571 262 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 TAF11Q15544 211 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 PTCHD3Q3KNS1 767 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 PAGE2BQ5JRK9 111 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 TCHHL1Q5QJ38 904 aaPredicted RBP10.85□□□□□ -0.67
SKA2-204ENST00000578519 IL23RQ5VWK5 629 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 EGFLAMQ63HQ2 1017 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 CAPN13Q6MZZ7 669 aaPredicted RBP10.85□□□□□ -0.67
SKA2-204ENST00000578519 KIAA1161Q6NSJ0 714 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 PNCKQ6P2M8 343 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 NEK5Q6P3R8 708 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 CYP20A1Q6UW02 462 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 SCIMPQ6UWF3 145 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 PARM1Q6UWI2 310 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.85□□□□□ -0.67
SKA2-204ENST00000578519 Q6ZSR9 355 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 LRRTM4Q86VH4 590 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 ZFAND4Q86XD8 727 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 RASGRP3Q8IV61 690 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 TDHQ8IZJ6 230 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 SFRP1Q8N474 314 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 HDDC3Q8N4P3 179 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 TNIP2Q8NFZ5 429 aa10.85□□□□□ -0.67
SKA2-204ENST00000578519 OR2L2Q8NH16 312 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms