RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 ISCA2Q86U28 154 aa7.84□□□□□ -1.15
COPS3-215ENST00000578317 PIM3Q86V86 326 aa7.84□□□□□ -1.15
COPS3-215ENST00000578317 PARGQ86W56 976 aa7.84□□□□□ -1.15
COPS3-215ENST00000578317 SYT12Q8IV01 421 aa7.84□□□□□ -1.15
COPS3-215ENST00000578317 RASGRP3Q8IV61 690 aa7.84□□□□□ -1.15
COPS3-215ENST00000578317 CENPLQ8N0S6 344 aaPredicted RBP7.84□□□□□ -1.15
COPS3-215ENST00000578317 KRT222Q8N1A0 295 aa7.84□□□□□ -1.15
COPS3-215ENST00000578317 C4orf33Q8N1A6 199 aa7.84□□□□□ -1.15
COPS3-215ENST00000578317 SDR16C5Q8N3Y7 309 aa7.84□□□□□ -1.15
COPS3-215ENST00000578317 TMEM151AQ8N4L1 468 aa7.84□□□□□ -1.15
COPS3-215ENST00000578317 CELF2-AS1Q8N7Q2 184 aa7.84□□□□□ -1.15
COPS3-215ENST00000578317 SIDT2Q8NBJ9 832 aaKnown RBP7.84□□□□□ -1.15
COPS3-215ENST00000578317 RHEBL1Q8TAI7 183 aa7.84□□□□□ -1.15
COPS3-215ENST00000578317 LKAAEAR1Q8TD35 194 aa7.84□□□□□ -1.15
COPS3-215ENST00000578317 EEF1AKMT1Q8WVE0 214 aa7.84□□□□□ -1.15
COPS3-215ENST00000578317 ANKRD49Q8WVL7 239 aa7.84□□□□□ -1.15
COPS3-215ENST00000578317 OR1E3Q8WZA6 343 aa7.84□□□□□ -1.15
COPS3-215ENST00000578317 SLC13A1Q9BZW2 595 aa7.84□□□□□ -1.15
COPS3-215ENST00000578317 VPS11Q9H270 941 aa7.84□□□□□ -1.15
COPS3-215ENST00000578317 TFB2MQ9H5Q4 396 aaKnown RBP7.84□□□□□ -1.15
COPS3-215ENST00000578317 SOX17Q9H6I2 414 aaPredicted RBP7.84□□□□□ -1.15
COPS3-215ENST00000578317 NMRAL1Q9HBL8 299 aa7.84□□□□□ -1.15
COPS3-215ENST00000578317 WASH6PQ9NQA3 447 aa7.84□□□□□ -1.15
COPS3-215ENST00000578317 SLC23A2Q9UGH3 650 aa7.84□□□□□ -1.15
COPS3-215ENST00000578317 RUVBL2Q9Y230 463 aaKnown RBP7.84□□□□□ -1.15
COPS3-215ENST00000578317 PLLPQ9Y342 182 aa7.84□□□□□ -1.15
COPS3-215ENST00000578317 PCYT1BQ9Y5K3 369 aaPredicted RBP7.84□□□□□ -1.15
COPS3-215ENST00000578317 FRYLO94915 3013 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 H3BQF6 201 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 GFYI3L273 518 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 GOLGA8RI6L899 631 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 COPEO14579 308 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 OIP5O43482 229 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 ZWINTO95229 277 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 CSF2P04141 144 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 CELA2BP08218 269 aaPredicted RBP7.83□□□□□ -1.16
COPS3-215ENST00000578317 GSTP1P09211 210 aaKnown RBP7.83□□□□□ -1.16
COPS3-215ENST00000578317 RBP1P09455 135 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 LTA4HP09960 611 aaKnown RBP7.83□□□□□ -1.16
COPS3-215ENST00000578317 MPC1LP0DKB6 136 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 CD1DP15813 335 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 RXRGP48443 463 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 PPARDQ03181 441 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 HSPA14Q0VDF9 509 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 SIM2Q14190 667 aaPredicted RBP7.83□□□□□ -1.16
COPS3-215ENST00000578317 ZNF460Q14592 562 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 CCDC153Q494R4 210 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 ACSBG2Q5FVE4 666 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 DOK6Q6PKX4 331 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 ABRAXAS1Q6UWZ7 409 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 CDHR3Q6ZTQ4 885 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 LSRQ86X29 649 aaPredicted RBP7.83□□□□□ -1.16
COPS3-215ENST00000578317 SPATS2Q86XZ4 545 aaKnown RBP7.83□□□□□ -1.16
COPS3-215ENST00000578317 CFAP206Q8IYR0 622 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 SLC22A15Q8IZD6 547 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 PLD6Q8N2A8 252 aaKnown RBP7.83□□□□□ -1.16
COPS3-215ENST00000578317 CEP76Q8TAP6 659 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 GPBAR1Q8TDU6 330 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 DENND1AQ8TEH3 1009 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 NAT14Q8WUY8 206 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 ASB11Q8WXH4 323 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 ELMO1Q92556 727 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 TSACCQ96A04 125 aaPredicted RBP7.83□□□□□ -1.16
COPS3-215ENST00000578317 KIAA1191Q96A73 305 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 TMEM159Q96B96 161 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 NXNL1Q96CM4 212 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 APOPT1Q96IL0 206 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 OR2M4Q96R27 311 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 COG4Q9H9E3 785 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 CARS2Q9HA77 564 aaKnown RBP7.83□□□□□ -1.16
COPS3-215ENST00000578317 CYP4F12Q9HCS2 524 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 MRPL40Q9NQ50 206 aaKnown RBP7.83□□□□□ -1.16
COPS3-215ENST00000578317 TMEM74BQ9NUR3 256 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 KLQ9UEF7 1012 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 PCOLCE2Q9UKZ9 415 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 PNMA8BQ9ULN7 279 aaPredicted RBP7.83□□□□□ -1.16
COPS3-215ENST00000578317 PCDHB14Q9Y5E9 798 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 PCDHGA5Q9Y5G8 931 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 ZNF318Q5VUA4 2279 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 CACNA1HO95180 2353 aa7.83□□□□□ -1.16
COPS3-215ENST00000578317 TARM1B6A8C7 271 aa7.82□□□□□ -1.16
COPS3-215ENST00000578317 SLC16A5O15375 505 aa7.82□□□□□ -1.16
COPS3-215ENST00000578317 WIPF1O43516 503 aa7.82□□□□□ -1.16
COPS3-215ENST00000578317 RGS9O75916 674 aaPredicted RBP7.82□□□□□ -1.16
COPS3-215ENST00000578317 MATN4O95460 622 aa7.82□□□□□ -1.16
COPS3-215ENST00000578317 NME1P15531 152 aaKnown RBP7.82□□□□□ -1.16
COPS3-215ENST00000578317 ITGB6P18564 788 aa7.82□□□□□ -1.16
COPS3-215ENST00000578317 ACADLP28330 430 aa7.82□□□□□ -1.16
COPS3-215ENST00000578317 RPA3P35244 121 aaPredicted RBP7.82□□□□□ -1.16
COPS3-215ENST00000578317 ETV4P43268 484 aa7.82□□□□□ -1.16
COPS3-215ENST00000578317 GNPDA1P46926 289 aa7.82□□□□□ -1.16
COPS3-215ENST00000578317 DHPSP49366 369 aaPredicted RBP7.82□□□□□ -1.16
COPS3-215ENST00000578317 CSNK1EP49674 416 aaKnown RBP7.82□□□□□ -1.16
COPS3-215ENST00000578317 KPNA2P52292 529 aaKnown RBP7.82□□□□□ -1.16
COPS3-215ENST00000578317 PGGT1BP53609 377 aa7.82□□□□□ -1.16
COPS3-215ENST00000578317 PPP2R2AP63151 447 aa7.82□□□□□ -1.16
COPS3-215ENST00000578317 DLG1Q12959 904 aa7.82□□□□□ -1.16
COPS3-215ENST00000578317 CSHL1Q14406 222 aa7.82□□□□□ -1.16
COPS3-215ENST00000578317 DUOXA1Q1HG43 343 aa7.82□□□□□ -1.16
COPS3-215ENST00000578317 CAPRIN2Q6IMN6 1127 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms