RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 AKIRIN1Q9H9L7 192 aaPredicted RBP14.03□□□□□ -0.16
SMARCE1-213ENST00000578044 HOMER3Q9NSC5 361 aa14.03□□□□□ -0.16
SMARCE1-213ENST00000578044 PCMTD2Q9NV79 361 aa14.03□□□□□ -0.16
SMARCE1-213ENST00000578044 TLK1Q9UKI8 766 aa14.03□□□□□ -0.16
SMARCE1-213ENST00000578044 TCFL5Q9UL49 500 aa14.03□□□□□ -0.16
SMARCE1-213ENST00000578044 ZNF148Q9UQR1 794 aa14.03□□□□□ -0.16
SMARCE1-213ENST00000578044 ASF1AQ9Y294 204 aa14.03□□□□□ -0.16
SMARCE1-213ENST00000578044 TP53TG5Q9Y2B4 290 aa14.03□□□□□ -0.16
SMARCE1-213ENST00000578044 TCAF1Q9Y4C2 921 aa14.03□□□□□ -0.16
SMARCE1-213ENST00000578044 PCM1Q15154 2024 aa14.03□□□□□ -0.16
SMARCE1-213ENST00000578044 ESPL1Q14674 2120 aa14.03□□□□□ -0.16
SMARCE1-213ENST00000578044 E7EQ34 232 aa14.02□□□□□ -0.17
SMARCE1-213ENST00000578044 CCL22O00626 93 aa14.02□□□□□ -0.17
SMARCE1-213ENST00000578044 KPNA5O15131 536 aa14.02□□□□□ -0.17
SMARCE1-213ENST00000578044 KLHL41O60662 606 aa14.02□□□□□ -0.17
SMARCE1-213ENST00000578044 SLCO2B1O94956 709 aa14.02□□□□□ -0.17
SMARCE1-213ENST00000578044 ONECUT2O95948 504 aa14.02□□□□□ -0.17
SMARCE1-213ENST00000578044 CYP2A7P20853 494 aa14.02□□□□□ -0.17
SMARCE1-213ENST00000578044 VARSP26640 1264 aaKnown RBP14.02□□□□□ -0.17
SMARCE1-213ENST00000578044 GABRA4P48169 554 aa14.02□□□□□ -0.17
SMARCE1-213ENST00000578044 TTPAP49638 278 aa14.02□□□□□ -0.17
SMARCE1-213ENST00000578044 ABRQ12979 859 aa14.02□□□□□ -0.17
SMARCE1-213ENST00000578044 RHBDD2Q6NTF9 364 aa14.02□□□□□ -0.17
SMARCE1-213ENST00000578044 TLDC1Q6P9B6 456 aa14.02□□□□□ -0.17
SMARCE1-213ENST00000578044 UNC5DQ6UXZ4 953 aa14.02□□□□□ -0.17
SMARCE1-213ENST00000578044 UNC5AQ6ZN44 842 aa14.02□□□□□ -0.17
SMARCE1-213ENST00000578044 ASB18Q6ZVZ8 466 aa14.02□□□□□ -0.17
SMARCE1-213ENST00000578044 PTRH1Q86Y79 214 aaKnown RBP14.02□□□□□ -0.17
SMARCE1-213ENST00000578044 GPR135Q8IZ08 494 aa14.02□□□□□ -0.17
SMARCE1-213ENST00000578044 TEX19Q8NA77 164 aa14.02□□□□□ -0.17
SMARCE1-213ENST00000578044 GLIS1Q8NBF1 620 aa14.02□□□□□ -0.17
SMARCE1-213ENST00000578044 OR1L3Q8NH93 324 aa14.02□□□□□ -0.17
SMARCE1-213ENST00000578044 ELMO1Q92556 727 aa14.02□□□□□ -0.17
SMARCE1-213ENST00000578044 HDAC10Q969S8 669 aa14.02□□□□□ -0.17
SMARCE1-213ENST00000578044 OR2A14Q96R47 310 aa14.02□□□□□ -0.17
SMARCE1-213ENST00000578044 DESI2Q9BSY9 194 aa14.02□□□□□ -0.17
SMARCE1-213ENST00000578044 TLR10Q9BXR5 811 aa14.02□□□□□ -0.17
SMARCE1-213ENST00000578044 AP1M1Q9BXS5 423 aa14.02□□□□□ -0.17
SMARCE1-213ENST00000578044 IL22Q9GZX6 179 aa14.02□□□□□ -0.17
SMARCE1-213ENST00000578044 ZNF71Q9NQZ8 489 aaPredicted RBP14.02□□□□□ -0.17
SMARCE1-213ENST00000578044 SRPK3Q9UPE1 567 aa14.02□□□□□ -0.17
SMARCE1-213ENST00000578044 ICKQ9UPZ9 632 aa14.02□□□□□ -0.17
SMARCE1-213ENST00000578044 PADI2Q9Y2J8 665 aa14.02□□□□□ -0.17
SMARCE1-213ENST00000578044 CCDC88CQ9P219 2028 aa14.02□□□□□ -0.17
SMARCE1-213ENST00000578044 HIVEP3Q5T1R4 2406 aa14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 A0A0J9YY10 115 aa14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 TMEM150CB9EJG8 249 aa14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 E7EVH7 732 aa14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 ZIC2O95409 532 aaPredicted RBP14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 CHRM5P08912 532 aaPredicted RBP14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 AGXTP21549 392 aa14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 RAB28P51157 221 aa14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 RRADP55042 308 aa14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 ADARP55265 1226 aaKnown RBP14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 NCF4Q15080 339 aa14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 RPS6KA1Q15418 735 aa14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 KYNUQ16719 465 aa14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 PCID2Q5JVF3 399 aa14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 YOD1Q5VVQ6 348 aaPredicted RBP14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 FAM199XQ6PEV8 388 aaPredicted RBP14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 FAM198BQ6UWH4 519 aa14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 PPP1R21Q6ZMI0 780 aa14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 CDHR3Q6ZTQ4 885 aa14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 ZNF534Q76KX8 674 aa14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 HOOK3Q86VS8 718 aa14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 SYTL1Q8IYJ3 562 aa14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 CCDC89Q8N998 374 aa14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 C19orf47Q8N9M1 422 aaKnown RBP14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 PHC3Q8NDX5 983 aa14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 ATG4AQ8WYN0 398 aa14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 MIB2Q96AX9 1013 aa14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 CLIP3Q96DZ5 547 aa14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 PPM1MQ96MI6 270 aa14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 RAB11FIP5Q9BXF6 653 aa14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 ING2Q9H160 280 aa14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 MRM3Q9HC36 420 aaKnown RBP14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 RAB6BQ9NRW1 208 aa14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 TREX1Q9NSU2 369 aa14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 FAM8A1Q9UBU6 413 aa14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 G3BP2Q9UN86 482 aaKnown RBP14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 SNX7Q9UNH6 387 aa14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 CDYLQ9Y232 598 aa14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 KLK4Q9Y5K2 254 aa14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 PRSS21Q9Y6M0 314 aa14.01□□□□□ -0.17
SMARCE1-213ENST00000578044 CCDC78A2IDD5 438 aa14□□□□□ -0.17
SMARCE1-213ENST00000578044 C9J4A7 227 aa14□□□□□ -0.17
SMARCE1-213ENST00000578044 PRMT5O14744 637 aaPredicted RBP14□□□□□ -0.17
SMARCE1-213ENST00000578044 S1PR4O95977 384 aa14□□□□□ -0.17
SMARCE1-213ENST00000578044 GOT2P00505 430 aaKnown RBP14□□□□□ -0.17
SMARCE1-213ENST00000578044 APOA4P06727 396 aa14□□□□□ -0.17
SMARCE1-213ENST00000578044 APRTP07741 180 aa14□□□□□ -0.17
SMARCE1-213ENST00000578044 PRSS56P0CW18 603 aa14□□□□□ -0.17
SMARCE1-213ENST00000578044 UGT2B7P16662 529 aa14□□□□□ -0.17
SMARCE1-213ENST00000578044 RPS3P23396 243 aaKnown RBP eCLIP14□□□□□ -0.17
SMARCE1-213ENST00000578044 NPY2RP49146 381 aa14□□□□□ -0.17
SMARCE1-213ENST00000578044 PGDP52209 483 aa14□□□□□ -0.17
SMARCE1-213ENST00000578044 SOX8P57073 446 aa14□□□□□ -0.17
SMARCE1-213ENST00000578044 PRAMEP78395 509 aa14□□□□□ -0.17
SMARCE1-213ENST00000578044 IL10RAQ13651 578 aa14□□□□□ -0.17
SMARCE1-213ENST00000578044 SIX1Q15475 284 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms