RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 PFKFB4Q16877 469 aa13.53□□□□□ -0.24
RNF43-202ENST00000577625 ZDHHC20Q5W0Z9 365 aa13.53□□□□□ -0.24
RNF43-202ENST00000577625 PTRHD1Q6GMV3 140 aaKnown RBP13.53□□□□□ -0.24
RNF43-202ENST00000577625 C16orf89Q6UX73 402 aa13.53□□□□□ -0.24
RNF43-202ENST00000577625 C11orf74Q86VG3 221 aa13.53□□□□□ -0.24
RNF43-202ENST00000577625 CPNE9Q8IYJ1 553 aa13.53□□□□□ -0.24
RNF43-202ENST00000577625 PHTF2Q8N3S3 785 aa13.53□□□□□ -0.24
RNF43-202ENST00000577625 EEF1AKMT1Q8WVE0 214 aa13.53□□□□□ -0.24
RNF43-202ENST00000577625 HPS1Q92902 700 aa13.53□□□□□ -0.24
RNF43-202ENST00000577625 FUBP1Q96AE4 644 aaKnown RBP13.53□□□□□ -0.24
RNF43-202ENST00000577625 FBXL8Q96CD0 374 aa13.53□□□□□ -0.24
RNF43-202ENST00000577625 LINGO1Q96FE5 620 aa13.53□□□□□ -0.24
RNF43-202ENST00000577625 PDLIM5Q96HC4 596 aaKnown RBP13.53□□□□□ -0.24
RNF43-202ENST00000577625 C1orf50Q9BV19 199 aa13.53□□□□□ -0.24
RNF43-202ENST00000577625 CXorf21Q9HAI6 301 aa13.53□□□□□ -0.24
RNF43-202ENST00000577625 SARS2Q9NP81 518 aaKnown RBP13.53□□□□□ -0.24
RNF43-202ENST00000577625 NPEPPSL1A6NEC2 478 aa13.52□□□□□ -0.24
RNF43-202ENST00000577625 CCDC85CA6NKD9 419 aa13.52□□□□□ -0.24
RNF43-202ENST00000577625 SUPT3HB4E1H0 165 aa13.52□□□□□ -0.24
RNF43-202ENST00000577625 TMX2-CTNND1H3BSU7 103 aa13.52□□□□□ -0.24
RNF43-202ENST00000577625 BTN3A1O00481 513 aa13.52□□□□□ -0.24
RNF43-202ENST00000577625 KLK8O60259 260 aa13.52□□□□□ -0.24
RNF43-202ENST00000577625 ECI2O75521 394 aa13.52□□□□□ -0.24
RNF43-202ENST00000577625 GFAPP14136 432 aa13.52□□□□□ -0.24
RNF43-202ENST00000577625 TIMP2P16035 220 aa13.52□□□□□ -0.24
RNF43-202ENST00000577625 ZNF30P17039 623 aa13.52□□□□□ -0.24
RNF43-202ENST00000577625 ENDOUP21128 410 aaKnown RBP13.52□□□□□ -0.24
RNF43-202ENST00000577625 VIPR1P32241 457 aa13.52□□□□□ -0.24
RNF43-202ENST00000577625 CDH15P55291 814 aa13.52□□□□□ -0.24
RNF43-202ENST00000577625 BNIP3Q12983 259 aa13.52□□□□□ -0.24
RNF43-202ENST00000577625 ZNF805Q5CZA5 627 aa13.52□□□□□ -0.24
RNF43-202ENST00000577625 CADM3Q8N126 398 aa13.52□□□□□ -0.24
RNF43-202ENST00000577625 CLDN19Q8N6F1 224 aa13.52□□□□□ -0.24
RNF43-202ENST00000577625 LKAAEAR1Q8TD35 194 aa13.52□□□□□ -0.24
RNF43-202ENST00000577625 LRIG1Q96JA1 1093 aa13.52□□□□□ -0.24
RNF43-202ENST00000577625 ANKRD60Q9BZ19 345 aa13.52□□□□□ -0.24
RNF43-202ENST00000577625 PLA2G2FQ9BZM2 168 aa13.52□□□□□ -0.24
RNF43-202ENST00000577625 KLHL25Q9H0H3 589 aa13.52□□□□□ -0.24
RNF43-202ENST00000577625 SIAEQ9HAT2 523 aa13.52□□□□□ -0.24
RNF43-202ENST00000577625 TNFRSF12AQ9NP84 129 aa13.52□□□□□ -0.24
RNF43-202ENST00000577625 PCDH12Q9NPG4 1184 aa13.52□□□□□ -0.24
RNF43-202ENST00000577625 TMEM9Q9P0T7 183 aa13.52□□□□□ -0.24
RNF43-202ENST00000577625 DAPK2Q9UIK4 370 aa13.52□□□□□ -0.24
RNF43-202ENST00000577625 CORINQ9Y5Q5 1042 aa13.52□□□□□ -0.24
RNF43-202ENST00000577625 NOTOA8MTQ0 251 aa13.52□□□□□ -0.25
RNF43-202ENST00000577625 UBFD1O14562 309 aaKnown RBP13.52□□□□□ -0.25
RNF43-202ENST00000577625 DCXO43602 365 aa13.52□□□□□ -0.25
RNF43-202ENST00000577625 CYP2A6P11509 494 aaPredicted RBP13.52□□□□□ -0.25
RNF43-202ENST00000577625 CD247P20963 164 aa13.52□□□□□ -0.25
RNF43-202ENST00000577625 OPRD1P41143 372 aa13.52□□□□□ -0.25
RNF43-202ENST00000577625 EIF4HQ15056 248 aaKnown RBP13.52□□□□□ -0.25
RNF43-202ENST00000577625 POM121L1PQ3SYA9 428 aa13.52□□□□□ -0.25
RNF43-202ENST00000577625 ATP13A5Q4VNC0 1218 aa13.52□□□□□ -0.25
RNF43-202ENST00000577625 FGD3Q5JSP0 725 aa13.52□□□□□ -0.25
RNF43-202ENST00000577625 MMAAQ8IVH4 418 aaKnown RBP13.52□□□□□ -0.25
RNF43-202ENST00000577625 FBXO39Q8N4B4 442 aa13.52□□□□□ -0.25
RNF43-202ENST00000577625 PPP1R36Q96LQ0 422 aa13.52□□□□□ -0.25
RNF43-202ENST00000577625 CLEC1BQ9P126 229 aa13.52□□□□□ -0.25
RNF43-202ENST00000577625 C16orf96A6NNT2 1141 aa13.51□□□□□ -0.25
RNF43-202ENST00000577625 STX16-NPEPL1H3BU86 382 aa13.51□□□□□ -0.25
RNF43-202ENST00000577625 SDHDO14521 159 aa13.51□□□□□ -0.25
RNF43-202ENST00000577625 STX16O14662 325 aa13.51□□□□□ -0.25
RNF43-202ENST00000577625 SIX3O95343 332 aaPredicted RBP13.51□□□□□ -0.25
RNF43-202ENST00000577625 KRT75O95678 551 aa13.51□□□□□ -0.25
RNF43-202ENST00000577625 S100BP04271 92 aaPredicted RBP13.51□□□□□ -0.25
RNF43-202ENST00000577625 HLA-EP13747 358 aa13.51□□□□□ -0.25
RNF43-202ENST00000577625 NELFEP18615 380 aaKnown RBP13.51□□□□□ -0.25
RNF43-202ENST00000577625 KLF10Q13118 480 aa13.51□□□□□ -0.25
RNF43-202ENST00000577625 ARHGEF7Q14155 803 aa13.51□□□□□ -0.25
RNF43-202ENST00000577625 NRF1Q16656 503 aa13.51□□□□□ -0.25
RNF43-202ENST00000577625 FNDC3BQ53EP0 1204 aaKnown RBP13.51□□□□□ -0.25
RNF43-202ENST00000577625 AGAP7PQ5VUJ5 663 aa13.51□□□□□ -0.25
RNF43-202ENST00000577625 MACC1Q6ZN28 852 aa13.51□□□□□ -0.25
RNF43-202ENST00000577625 BNC2Q6ZN30 1099 aaPredicted RBP13.51□□□□□ -0.25
RNF43-202ENST00000577625 CPA6Q8N4T0 437 aa13.51□□□□□ -0.25
RNF43-202ENST00000577625 BHLHE22Q8NFJ8 381 aaPredicted RBP13.51□□□□□ -0.25
RNF43-202ENST00000577625 TANKQ92844 425 aa13.51□□□□□ -0.25
RNF43-202ENST00000577625 C1QTNF3Q9BXJ4 246 aa13.51□□□□□ -0.25
RNF43-202ENST00000577625 MEAF6Q9HAF1 191 aa13.51□□□□□ -0.25
RNF43-202ENST00000577625 SACM1LQ9NTJ5 587 aa13.51□□□□□ -0.25
RNF43-202ENST00000577625 PKD2L2Q9NZM6 624 aa13.51□□□□□ -0.25
RNF43-202ENST00000577625 TICRRQ7Z2Z1 1910 aa13.51□□□□□ -0.25
RNF43-202ENST00000577625 ATG2BQ96BY7 2078 aa13.51□□□□□ -0.25
RNF43-202ENST00000577625 SLC22A2O15244 555 aa13.51□□□□□ -0.25
RNF43-202ENST00000577625 ADSLP30566 484 aaPredicted RBP13.51□□□□□ -0.25
RNF43-202ENST00000577625 RALGDSQ12967 914 aa13.51□□□□□ -0.25
RNF43-202ENST00000577625 ADAM15Q13444 863 aa13.51□□□□□ -0.25
RNF43-202ENST00000577625 RUNX3Q13761 415 aa13.51□□□□□ -0.25
RNF43-202ENST00000577625 HNRNPA1L2Q32P51 320 aaKnown RBP13.51□□□□□ -0.25
RNF43-202ENST00000577625 PIGGQ5H8A4 983 aa13.51□□□□□ -0.25
RNF43-202ENST00000577625 TXNDC11Q6PKC3 985 aa13.51□□□□□ -0.25
RNF43-202ENST00000577625 PARS2Q7L3T8 475 aaKnown RBP13.51□□□□□ -0.25
RNF43-202ENST00000577625 HSD11B1LQ7Z5J1 315 aa13.51□□□□□ -0.25
RNF43-202ENST00000577625 IGFN1Q86VF2 1251 aa13.51□□□□□ -0.25
RNF43-202ENST00000577625 CPSF7Q8N684 471 aaKnown RBP13.51□□□□□ -0.25
RNF43-202ENST00000577625 PDPRQ8NCN5 879 aa13.51□□□□□ -0.25
RNF43-202ENST00000577625 TNIP2Q8NFZ5 429 aa13.51□□□□□ -0.25
RNF43-202ENST00000577625 OR7G1Q8NGA0 311 aa13.51□□□□□ -0.25
RNF43-202ENST00000577625 HCAR2Q8TDS4 363 aa13.51□□□□□ -0.25
RNF43-202ENST00000577625 CHFRQ96EP1 664 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms