RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.27□□□□□ -1.57
VAPA-203ENST00000577539 FUBP1Q96AE4 644 aaKnown RBP5.27□□□□□ -1.57
VAPA-203ENST00000577539 TEX37Q96LM6 180 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 PSKH2Q96QS6 385 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 DCUN1D5Q9BTE7 237 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 ADGRE3Q9BY15 652 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.27□□□□□ -1.57
VAPA-203ENST00000577539 GP6Q9HCN6 339 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 PTTG2Q9NZH5 202 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 SLAMF8Q9P0V8 285 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 ANAPC2Q9UJX6 822 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 USP22Q9UPT9 525 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 DMTF1Q9Y222 760 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 PKP3Q9Y446 797 aa5.27□□□□□ -1.57
VAPA-203ENST00000577539 EI24O14681 340 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 GSTA4O15217 222 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 ADAM12O43184 909 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 HNRNPRO43390 633 aaKnown RBP5.26□□□□□ -1.57
VAPA-203ENST00000577539 C1RP00736 705 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 LDLRP01130 860 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 TP53P04637 393 aaPredicted RBP5.26□□□□□ -1.57
VAPA-203ENST00000577539 CAPN1P07384 714 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 FGF4P08620 206 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 GNAO1P09471 354 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 SLC2A4P14672 509 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 GGT5P36269 586 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 TTPAP49638 278 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 ATP4BP51164 291 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 POLR2JP52435 117 aaKnown RBP5.26□□□□□ -1.57
VAPA-203ENST00000577539 MAPK10P53779 464 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 BNIP2Q12982 314 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 GPR17Q13304 367 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 PLCL1Q15111 1095 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 TAF1AQ15573 450 aaPredicted RBP5.26□□□□□ -1.57
VAPA-203ENST00000577539 PLA2G4EQ3MJ16 856 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 KANK2Q63ZY3 851 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 FAM117BQ6P1L5 589 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 SLC2A7Q6PXP3 512 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 FAM151BQ6UXP7 276 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 TAS1R1Q7RTX1 841 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 SAPCD2Q86UD0 394 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 CHERPQ8IWX8 916 aaKnown RBP5.26□□□□□ -1.57
VAPA-203ENST00000577539 FAM126BQ8IXS8 530 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 RHEBL1Q8TAI7 183 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 CYB5D2Q8WUJ1 264 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 ZNF597Q96LX8 424 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 ADI1Q9BV57 179 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 DERL2Q9GZP9 239 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 SDR39U1Q9NRG7 319 aaPredicted RBP5.26□□□□□ -1.57
VAPA-203ENST00000577539 INTS10Q9NVR2 710 aaKnown RBP5.26□□□□□ -1.57
VAPA-203ENST00000577539 NLE1Q9NVX2 485 aaPredicted RBP5.26□□□□□ -1.57
VAPA-203ENST00000577539 TRPM5Q9NZQ8 1165 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 HACD3Q9P035 362 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 LEF1Q9UJU2 399 aaPredicted RBP5.26□□□□□ -1.57
VAPA-203ENST00000577539 TSC2P49815 1807 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 ANKRD66B4E2M5 251 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 ARVCFO00192 962 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 AP1G1O43747 822 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 VPS4BO75351 444 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 MLYCDO95822 493 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 ALPIP09923 528 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 UROSP10746 265 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 RANBP1P43487 201 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 HTR6P50406 440 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 DGKQP52824 942 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 CDH4P55283 916 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 INHBEP58166 350 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 MTPNP58546 118 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 TIAL1Q01085 375 aaKnown RBP eCLIP5.26□□□□□ -1.57
VAPA-203ENST00000577539 PRKG2Q13237 762 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 ODF1Q14990 250 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 ADRM1Q16186 407 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 ARTNQ5T4W7 220 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 EFL1Q7Z2Z2 1120 aaKnown RBP5.26□□□□□ -1.57
VAPA-203ENST00000577539 ARHGAP22Q7Z5H3 698 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 ZBTB46Q86UZ6 589 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 TMEM173Q86WV6 379 aaPredicted RBP5.26□□□□□ -1.57
VAPA-203ENST00000577539 CMTR2Q8IYT2 770 aaKnown RBP5.26□□□□□ -1.57
VAPA-203ENST00000577539 DHRSXQ8N5I4 330 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 CLDN19Q8N6F1 224 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 B4GALNT2Q8NHY0 566 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 STON2Q8WXE9 905 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 ABTB1Q969K4 478 aaPredicted RBP5.26□□□□□ -1.57
VAPA-203ENST00000577539 ULK4Q96C45 1275 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 FBXL20Q96IG2 436 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 NSMCE2Q96MF7 247 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 C17orf80Q9BSJ5 609 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 TBCDQ9BTW9 1192 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 TTPALQ9BTX7 342 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 C9orf16Q9BUW7 83 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 THUMPD3Q9BV44 507 aaKnown RBP5.26□□□□□ -1.57
VAPA-203ENST00000577539 CLPBQ9H078 707 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 ABCG8Q9H221 673 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 CLK4Q9HAZ1 481 aaKnown RBP5.26□□□□□ -1.57
VAPA-203ENST00000577539 CCM2LQ9NUG4 571 aaPredicted RBP5.26□□□□□ -1.57
VAPA-203ENST00000577539 TMEM161AQ9NX61 479 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.26□□□□□ -1.57
VAPA-203ENST00000577539 FAF1Q9UNN5 650 aaPredicted RBP5.26□□□□□ -1.57
VAPA-203ENST00000577539 ASB1Q9Y576 335 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 A0A1W2PP18 115 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms