RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 ATP5DP30049 168 aa9.4□□□□□ -0.9
NPLOC4-216ENST00000574344 FDFT1P37268 417 aa9.4□□□□□ -0.9
NPLOC4-216ENST00000574344 RPL21P46778 160 aaKnown RBP9.4□□□□□ -0.9
NPLOC4-216ENST00000574344 PREPP48147 710 aa9.4□□□□□ -0.9
NPLOC4-216ENST00000574344 HSD11B2P80365 405 aa9.4□□□□□ -0.9
NPLOC4-216ENST00000574344 DMTNQ08495 405 aa9.4□□□□□ -0.9
NPLOC4-216ENST00000574344 CDH17Q12864 832 aa9.4□□□□□ -0.9
NPLOC4-216ENST00000574344 MSLNQ13421 630 aaPredicted RBP9.4□□□□□ -0.9
NPLOC4-216ENST00000574344 SNX1Q13596 522 aa9.4□□□□□ -0.9
NPLOC4-216ENST00000574344 ERV3-1Q14264 604 aa9.4□□□□□ -0.9
NPLOC4-216ENST00000574344 SIX1Q15475 284 aaPredicted RBP9.4□□□□□ -0.9
NPLOC4-216ENST00000574344 GPR19Q15760 415 aa9.4□□□□□ -0.9
NPLOC4-216ENST00000574344 DBN1Q16643 649 aa9.4□□□□□ -0.9
NPLOC4-216ENST00000574344 SKIDA1Q1XH10 827 aa9.4□□□□□ -0.9
NPLOC4-216ENST00000574344 FAM153CQ494X1 144 aa9.4□□□□□ -0.9
NPLOC4-216ENST00000574344 TTC27Q6P3X3 843 aa9.4□□□□□ -0.9
NPLOC4-216ENST00000574344 DRICH1Q6PGQ1 229 aaPredicted RBP9.4□□□□□ -0.9
NPLOC4-216ENST00000574344 CERS6Q6ZMG9 384 aa9.4□□□□□ -0.9
NPLOC4-216ENST00000574344 ATG14Q6ZNE5 492 aa9.4□□□□□ -0.9
NPLOC4-216ENST00000574344 PTRH1Q86Y79 214 aaKnown RBP9.4□□□□□ -0.9
NPLOC4-216ENST00000574344 KMT5CQ86Y97 462 aa9.4□□□□□ -0.9
NPLOC4-216ENST00000574344 TMEM126BQ8IUX1 230 aa9.4□□□□□ -0.9
NPLOC4-216ENST00000574344 KLHDC8BQ8IXV7 354 aa9.4□□□□□ -0.9
NPLOC4-216ENST00000574344 CLDN19Q8N6F1 224 aa9.4□□□□□ -0.9
NPLOC4-216ENST00000574344 ACVR1CQ8NER5 493 aa9.4□□□□□ -0.9
NPLOC4-216ENST00000574344 OR4E2Q8NGC2 313 aa9.4□□□□□ -0.9
NPLOC4-216ENST00000574344 CDKN2AIPNLQ96HQ2 116 aa9.4□□□□□ -0.9
NPLOC4-216ENST00000574344 SLC41A2Q96JW4 573 aa9.4□□□□□ -0.9
NPLOC4-216ENST00000574344 HGH1Q9BTY7 390 aa9.4□□□□□ -0.9
NPLOC4-216ENST00000574344 CENPHQ9H3R5 247 aa9.4□□□□□ -0.9
NPLOC4-216ENST00000574344 FGF21Q9NSA1 209 aa9.4□□□□□ -0.9
NPLOC4-216ENST00000574344 KCND3Q9UK17 655 aa9.4□□□□□ -0.9
NPLOC4-216ENST00000574344 ADAM21Q9UKJ8 722 aa9.4□□□□□ -0.9
NPLOC4-216ENST00000574344 PADI1Q9ULC6 663 aa9.4□□□□□ -0.9
NPLOC4-216ENST00000574344 BSNQ9UPA5 3926 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 IGLV3-16A0A075B6K0 115 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 TRBV5-4A0A0C4DH59 114 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 HEATR9A2RTY3 570 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 CDC14CA4D256 554 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 ERI2A8K979 691 aaKnown RBP9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 MATN2O00339 956 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 QSOX1O00391 747 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 MAP3K7O43318 606 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 LIASO43766 372 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 CPNE3O75131 537 aaKnown RBP9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 SCRG1O75711 98 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 AP2A2O94973 939 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 TIAF1O95411 115 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 FTH1P02794 183 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 NTRK1P04629 796 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 ITGB6P18564 788 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 F8A1P23610 371 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 STIP1P31948 543 aaKnown RBP9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 NSG1P42857 185 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 KPNA2P52292 529 aaKnown RBP9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 PRKG2Q13237 762 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 DNASE1L3Q13609 305 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 LAMB3Q13751 1172 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 BOP1Q14137 746 aaKnown RBP9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 KRT71Q3SY84 523 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 CAPRIN2Q6IMN6 1127 aaKnown RBP9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 PWWP2BQ6NUJ5 590 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 AFTPHQ6ULP2 937 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 TRMT10CQ7L0Y3 403 aaKnown RBP9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 PCGF5Q86SE9 256 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 PIANPQ8IYJ0 282 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 OR52E1Q8NGJ3 308 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 C9orf43Q8TAL5 461 aaPredicted RBP9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 CT55Q8WUE5 264 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 APOBEC4Q8WW27 367 aaKnown RBP9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 ELMO1Q92556 727 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 ATP6V1G3Q96LB4 118 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 TTC1Q99614 292 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 SLC7A5P2Q9GIP4 190 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 TWSG1Q9GZX9 223 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 OR52A5Q9H2C5 316 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 MVB12BQ9H7P6 319 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 ETNK1Q9HBU6 452 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 LHX9Q9NQ69 397 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 RAB6BQ9NRW1 208 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 ZDHHC18Q9NUE0 388 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 GRHL1Q9NZI5 618 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 ANAPC5Q9UJX4 755 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 POMT2Q9UKY4 750 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 POLHQ9Y253 713 aa9.39□□□□□ -0.91
NPLOC4-216ENST00000574344 PIPSLA2A3N6 862 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 CCDC162PA2VCL2 907 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 SLC9B1P1A6NJY1 282 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 TMEM150CB9EJG8 249 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 F8W8V4 182 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 AGPSO00116 658 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 SMAPO00193 183 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 BTN3A1O00481 513 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 LIN7AO14910 233 aaPredicted RBP9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 KRT14P02533 472 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 APRTP07741 180 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 GSTM1P09488 218 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 NUDT17P0C025 328 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 OR56A5P0C7T3 313 aa9.38□□□□□ -0.91
NPLOC4-216ENST00000574344 ETS1P14921 441 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms