RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 MYO10Q9HD67 2058 aa27.74■■■□□ 2.03
CTDNEP1-210ENST00000574322 VCANP13611 3396 aa27.74■■■□□ 2.03
CTDNEP1-210ENST00000574322 CATP04040 527 aaKnown RBP27.73■■■□□ 2.03
CTDNEP1-210ENST00000574322 TBL3Q12788 808 aaKnown RBP27.73■■■□□ 2.03
CTDNEP1-210ENST00000574322 WSCD2Q2TBF2 565 aa27.73■■■□□ 2.03
CTDNEP1-210ENST00000574322 PTCHD3Q3KNS1 767 aa27.73■■■□□ 2.03
CTDNEP1-210ENST00000574322 C6orf136Q5SQH8 315 aa27.73■■■□□ 2.03
CTDNEP1-210ENST00000574322 XKR5Q6UX68 686 aa27.73■■■□□ 2.03
CTDNEP1-210ENST00000574322 LILRA3Q8N6C8 439 aaPredicted RBP27.73■■■□□ 2.03
CTDNEP1-210ENST00000574322 ATL1Q8WXF7 558 aa27.73■■■□□ 2.03
CTDNEP1-210ENST00000574322 CCDC138Q96M89 665 aa27.73■■■□□ 2.03
CTDNEP1-210ENST00000574322 MRPL1Q9BYD6 325 aaKnown RBP27.73■■■□□ 2.03
CTDNEP1-210ENST00000574322 BRINP2Q9C0B6 783 aa27.73■■■□□ 2.03
CTDNEP1-210ENST00000574322 RNPEPL1Q9HAU8 725 aa27.73■■■□□ 2.03
CTDNEP1-210ENST00000574322 AIG1Q9NVV5 245 aa27.73■■■□□ 2.03
CTDNEP1-210ENST00000574322 A0A1W2PP55 124 aa27.72■■■□□ 2.03
CTDNEP1-210ENST00000574322 CHUKO15111 745 aa27.72■■■□□ 2.03
CTDNEP1-210ENST00000574322 ADAM23O75077 832 aa27.72■■■□□ 2.03
CTDNEP1-210ENST00000574322 PCDH8O95206 1070 aa27.72■■■□□ 2.03
CTDNEP1-210ENST00000574322 EGFP01133 1207 aa27.72■■■□□ 2.03
CTDNEP1-210ENST00000574322 ZNF8P17098 575 aaPredicted RBP27.72■■■□□ 2.03
CTDNEP1-210ENST00000574322 DRD1P21728 446 aa27.72■■■□□ 2.03
CTDNEP1-210ENST00000574322 MAP4P27816 1152 aaKnown RBP27.72■■■□□ 2.03
CTDNEP1-210ENST00000574322 ARL1P40616 181 aaPredicted RBP27.72■■■□□ 2.03
CTDNEP1-210ENST00000574322 PREPP48147 710 aa27.72■■■□□ 2.03
CTDNEP1-210ENST00000574322 HTR6P50406 440 aa27.72■■■□□ 2.03
CTDNEP1-210ENST00000574322 MTTPP55157 894 aa27.72■■■□□ 2.03
CTDNEP1-210ENST00000574322 ABRQ12979 859 aa27.72■■■□□ 2.03
CTDNEP1-210ENST00000574322 SMU1Q2TAY7 513 aa27.72■■■□□ 2.03
CTDNEP1-210ENST00000574322 C6orf163Q5TEZ5 329 aa27.72■■■□□ 2.03
CTDNEP1-210ENST00000574322 PAOXQ6QHF9 649 aa27.72■■■□□ 2.03
CTDNEP1-210ENST00000574322 IL27RAQ6UWB1 636 aa27.72■■■□□ 2.03
CTDNEP1-210ENST00000574322 TRMT11Q7Z4G4 463 aaKnown RBP27.72■■■□□ 2.03
CTDNEP1-210ENST00000574322 TRAPPC5Q8IUR0 188 aa27.72■■■□□ 2.03
CTDNEP1-210ENST00000574322 TSPEARQ8WU66 669 aa27.72■■■□□ 2.03
CTDNEP1-210ENST00000574322 FOPNLQ96NB1 174 aa27.72■■■□□ 2.03
CTDNEP1-210ENST00000574322 MKRN2Q9H000 416 aaKnown RBP27.72■■■□□ 2.03
CTDNEP1-210ENST00000574322 CD248Q9HCU0 757 aa27.72■■■□□ 2.03
CTDNEP1-210ENST00000574322 MUTYHQ9UIF7 546 aa27.72■■■□□ 2.03
CTDNEP1-210ENST00000574322 CCL27Q9Y4X3 112 aa27.72■■■□□ 2.03
CTDNEP1-210ENST00000574322 TRPM6Q9BX84 2022 aa27.72■■■□□ 2.03
CTDNEP1-210ENST00000574322 CLDN9O95484 217 aa27.72■■■□□ 2.03
CTDNEP1-210ENST00000574322 ACTR3P61158 418 aa27.72■■■□□ 2.03
CTDNEP1-210ENST00000574322 EEF1AKMT2Q5JPI9 291 aaKnown RBP27.72■■■□□ 2.03
CTDNEP1-210ENST00000574322 HACD2Q6Y1H2 254 aa27.72■■■□□ 2.03
CTDNEP1-210ENST00000574322 TRIM46Q7Z4K8 759 aa27.72■■■□□ 2.03
CTDNEP1-210ENST00000574322 FBXW8Q8N3Y1 598 aa27.72■■■□□ 2.03
CTDNEP1-210ENST00000574322 OR2L2Q8NH16 312 aa27.72■■■□□ 2.03
CTDNEP1-210ENST00000574322 MAGEB10Q96LZ2 347 aaPredicted RBP27.72■■■□□ 2.03
CTDNEP1-210ENST00000574322 DCLRE1BQ9H816 532 aa27.72■■■□□ 2.03
CTDNEP1-210ENST00000574322 RNF11Q9Y3C5 154 aa27.72■■■□□ 2.03
CTDNEP1-210ENST00000574322 PIAS3Q9Y6X2 628 aa27.72■■■□□ 2.03
CTDNEP1-210ENST00000574322 ZFC3H1O60293 1989 aaKnown RBP27.71■■■□□ 2.03
CTDNEP1-210ENST00000574322 A0A1W2PQF6 199 aa27.71■■■□□ 2.03
CTDNEP1-210ENST00000574322 BBIP1A8MTZ0 92 aa27.71■■■□□ 2.03
CTDNEP1-210ENST00000574322 H3BM21 787 aa27.71■■■□□ 2.03
CTDNEP1-210ENST00000574322 FBP2O00757 339 aa27.71■■■□□ 2.03
CTDNEP1-210ENST00000574322 ART3Q13508 389 aa27.71■■■□□ 2.03
CTDNEP1-210ENST00000574322 ABRAXAS2Q15018 415 aa27.71■■■□□ 2.03
CTDNEP1-210ENST00000574322 KIF19Q2TAC6 998 aa27.71■■■□□ 2.03
CTDNEP1-210ENST00000574322 ATP6AP1LQ52LC2 224 aa27.71■■■□□ 2.03
CTDNEP1-210ENST00000574322 SCIMPQ6UWF3 145 aa27.71■■■□□ 2.03
CTDNEP1-210ENST00000574322 C11orf96Q7Z7L8 435 aa27.71■■■□□ 2.03
CTDNEP1-210ENST00000574322 SFRP1Q8N474 314 aa27.71■■■□□ 2.03
CTDNEP1-210ENST00000574322 L3MBTL4Q8NA19 623 aa27.71■■■□□ 2.03
CTDNEP1-210ENST00000574322 HM13Q8TCT9 377 aa27.71■■■□□ 2.03
CTDNEP1-210ENST00000574322 USP7Q93009 1102 aa27.71■■■□□ 2.03
CTDNEP1-210ENST00000574322 TEX101Q9BY14 249 aa27.71■■■□□ 2.03
CTDNEP1-210ENST00000574322 DPEP2Q9H4A9 486 aa27.71■■■□□ 2.03
CTDNEP1-210ENST00000574322 HEBP1Q9NRV9 189 aa27.71■■■□□ 2.03
CTDNEP1-210ENST00000574322 DNAJC11Q9NVH1 559 aa27.71■■■□□ 2.03
CTDNEP1-210ENST00000574322 SCML1Q9UN30 329 aa27.71■■■□□ 2.03
CTDNEP1-210ENST00000574322 MGAT4DA6NG13 374 aa27.7■■■□□ 2.03
CTDNEP1-210ENST00000574322 PLRG1O43660 514 aaKnown RBP27.7■■■□□ 2.03
CTDNEP1-210ENST00000574322 RNASEH2AO75792 299 aaKnown RBP27.7■■■□□ 2.03
CTDNEP1-210ENST00000574322 PDHA2P29803 388 aa27.7■■■□□ 2.03
CTDNEP1-210ENST00000574322 MRPS21P82921 87 aaKnown RBP27.7■■■□□ 2.03
CTDNEP1-210ENST00000574322 CDK3Q00526 305 aa27.7■■■□□ 2.03
CTDNEP1-210ENST00000574322 EMX2Q04743 252 aa27.7■■■□□ 2.03
CTDNEP1-210ENST00000574322 LRP8Q14114 963 aa27.7■■■□□ 2.03
CTDNEP1-210ENST00000574322 PON2Q15165 354 aa27.7■■■□□ 2.03
CTDNEP1-210ENST00000574322 PDCD4Q53EL6 469 aaKnown RBP27.7■■■□□ 2.03
CTDNEP1-210ENST00000574322 NEK5Q6P3R8 708 aa27.7■■■□□ 2.03
CTDNEP1-210ENST00000574322 HEATR4Q86WZ0 1026 aa27.7■■■□□ 2.03
CTDNEP1-210ENST00000574322 OR9I1Q8NGQ6 314 aa27.7■■■□□ 2.03
CTDNEP1-210ENST00000574322 C1QTNF2Q9BXJ5 285 aa27.7■■■□□ 2.03
CTDNEP1-210ENST00000574322 DNMT3AQ9Y6K1 912 aaPredicted RBP27.7■■■□□ 2.03
CTDNEP1-210ENST00000574322 SLC28A1O00337 649 aa27.7■■■□□ 2.02
CTDNEP1-210ENST00000574322 LSM1O15116 133 aaKnown RBP27.7■■■□□ 2.02
CTDNEP1-210ENST00000574322 NRP2O60462 931 aa27.7■■■□□ 2.02
CTDNEP1-210ENST00000574322 POP7O75817 140 aaKnown RBP27.7■■■□□ 2.02
CTDNEP1-210ENST00000574322 TRIM23P36406 574 aa27.7■■■□□ 2.02
CTDNEP1-210ENST00000574322 PFN3P60673 137 aa27.7■■■□□ 2.02
CTDNEP1-210ENST00000574322 PCDH1Q08174 1060 aa27.7■■■□□ 2.02
CTDNEP1-210ENST00000574322 KIAA1161Q6NSJ0 714 aa27.7■■■□□ 2.02
CTDNEP1-210ENST00000574322 CFAP206Q8IYR0 622 aa27.7■■■□□ 2.02
CTDNEP1-210ENST00000574322 SERPINI1Q99574 410 aa27.7■■■□□ 2.02
CTDNEP1-210ENST00000574322 NPAS2Q99743 824 aa27.7■■■□□ 2.02
CTDNEP1-210ENST00000574322 WDR41Q9HAD4 459 aa27.7■■■□□ 2.02
CTDNEP1-210ENST00000574322 FBXL12Q9NXK8 326 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms