RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 LUMP51884 338 aaPredicted RBP4.23□□□□□ -1.73
CDC27-216ENST00000574304 B3GALT5-AS1P59052 145 aa4.23□□□□□ -1.73
CDC27-216ENST00000574304 SNRPD1P62314 119 aaKnown RBP4.23□□□□□ -1.73
CDC27-216ENST00000574304 PPARDQ03181 441 aa4.23□□□□□ -1.73
CDC27-216ENST00000574304 ZNF772Q68DY9 489 aaPredicted RBP4.23□□□□□ -1.73
CDC27-216ENST00000574304 PWWP2BQ6NUJ5 590 aa4.23□□□□□ -1.73
CDC27-216ENST00000574304 TMEM173Q86WV6 379 aaPredicted RBP4.23□□□□□ -1.73
CDC27-216ENST00000574304 CFAP206Q8IYR0 622 aa4.23□□□□□ -1.73
CDC27-216ENST00000574304 GUF1Q8N442 669 aaKnown RBP4.23□□□□□ -1.73
CDC27-216ENST00000574304 TMEM178AQ8NBL3 297 aa4.23□□□□□ -1.73
CDC27-216ENST00000574304 KBTBD8Q8NFY9 601 aa4.23□□□□□ -1.73
CDC27-216ENST00000574304 OR2T11Q8NH01 316 aa4.23□□□□□ -1.73
CDC27-216ENST00000574304 HPSE2Q8WWQ2 592 aa4.23□□□□□ -1.73
CDC27-216ENST00000574304 IRGQQ8WZA9 623 aa4.23□□□□□ -1.73
CDC27-216ENST00000574304 LPGAT1Q92604 370 aa4.23□□□□□ -1.73
CDC27-216ENST00000574304 ZNF653Q96CK0 615 aa4.23□□□□□ -1.73
CDC27-216ENST00000574304 OLFM1Q99784 485 aa4.23□□□□□ -1.73
CDC27-216ENST00000574304 S1PR5Q9H228 398 aa4.23□□□□□ -1.73
CDC27-216ENST00000574304 SDR39U1Q9NRG7 319 aaPredicted RBP4.23□□□□□ -1.73
CDC27-216ENST00000574304 ZDHHC18Q9NUE0 388 aa4.23□□□□□ -1.73
CDC27-216ENST00000574304 ZNF701Q9NV72 531 aaPredicted RBP4.23□□□□□ -1.73
CDC27-216ENST00000574304 TMEM181Q9P2C4 612 aa4.23□□□□□ -1.73
CDC27-216ENST00000574304 B3GAT1Q9P2W7 334 aa4.23□□□□□ -1.73
CDC27-216ENST00000574304 PCDHGB4Q9UN71 923 aa4.23□□□□□ -1.73
CDC27-216ENST00000574304 TMEM5Q9Y2B1 443 aa4.23□□□□□ -1.73
CDC27-216ENST00000574304 NME7Q9Y5B8 376 aa4.23□□□□□ -1.73
CDC27-216ENST00000574304 RNASEH1O60930 286 aaKnown RBP4.22□□□□□ -1.73
CDC27-216ENST00000574304 RAF1P04049 648 aa4.22□□□□□ -1.73
CDC27-216ENST00000574304 TPOP07202 933 aa4.22□□□□□ -1.73
CDC27-216ENST00000574304 CEBPBP17676 345 aa4.22□□□□□ -1.73
CDC27-216ENST00000574304 CA6P23280 308 aa4.22□□□□□ -1.73
CDC27-216ENST00000574304 EIF2DP41214 584 aaKnown RBP4.22□□□□□ -1.73
CDC27-216ENST00000574304 SP3Q02447 781 aa4.22□□□□□ -1.73
CDC27-216ENST00000574304 STK4Q13043 487 aa4.22□□□□□ -1.73
CDC27-216ENST00000574304 TEAD2Q15562 447 aa4.22□□□□□ -1.73
CDC27-216ENST00000574304 SPATA1Q5VX52 437 aa4.22□□□□□ -1.73
CDC27-216ENST00000574304 TMEM211Q6ICI0 200 aa4.22□□□□□ -1.73
CDC27-216ENST00000574304 PIGZQ86VD9 579 aa4.22□□□□□ -1.73
CDC27-216ENST00000574304 SCML4Q8N228 414 aa4.22□□□□□ -1.73
CDC27-216ENST00000574304 ARHGAP24Q8N264 748 aa4.22□□□□□ -1.73
CDC27-216ENST00000574304 MINDY1Q8N5J2 469 aa4.22□□□□□ -1.73
CDC27-216ENST00000574304 APPL2Q8NEU8 664 aa4.22□□□□□ -1.73
CDC27-216ENST00000574304 OR2T6Q8NHC8 308 aa4.22□□□□□ -1.73
CDC27-216ENST00000574304 EXD1Q8NHP7 514 aa4.22□□□□□ -1.73
CDC27-216ENST00000574304 PRPF31Q8WWY3 499 aaKnown RBP4.22□□□□□ -1.73
CDC27-216ENST00000574304 SUSD6Q92537 303 aa4.22□□□□□ -1.73
CDC27-216ENST00000574304 LINC00479Q96M42 142 aa4.22□□□□□ -1.73
CDC27-216ENST00000574304 MS4A10Q96PG2 267 aa4.22□□□□□ -1.73
CDC27-216ENST00000574304 NSMCE4AQ9NXX6 385 aa4.22□□□□□ -1.73
CDC27-216ENST00000574304 BARHL2Q9NY43 387 aa4.22□□□□□ -1.73
CDC27-216ENST00000574304 KLHL8Q9P2G9 620 aaPredicted RBP4.22□□□□□ -1.73
CDC27-216ENST00000574304 A8MV72 311 aaPredicted RBP4.21□□□□□ -1.74
CDC27-216ENST00000574304 GFPT2O94808 682 aa4.21□□□□□ -1.74
CDC27-216ENST00000574304 WDPCPO95876 746 aa4.21□□□□□ -1.74
CDC27-216ENST00000574304 OR2T7P0C7T2 308 aa4.21□□□□□ -1.74
CDC27-216ENST00000574304 MAGEA11P43364 429 aa4.21□□□□□ -1.74
CDC27-216ENST00000574304 NKX2-1P43699 371 aaPredicted RBP4.21□□□□□ -1.74
CDC27-216ENST00000574304 SLC9A3P48764 834 aa4.21□□□□□ -1.74
CDC27-216ENST00000574304 Q6ZSR9 355 aa4.21□□□□□ -1.74
CDC27-216ENST00000574304 TMEM139Q8IV31 216 aa4.21□□□□□ -1.74
CDC27-216ENST00000574304 OR4C3Q8NH37 302 aa4.21□□□□□ -1.74
CDC27-216ENST00000574304 CCDC107Q8WV48 283 aa4.21□□□□□ -1.74
CDC27-216ENST00000574304 TAF15Q92804 592 aaKnown RBP eCLIP4.21□□□□□ -1.74
CDC27-216ENST00000574304 ZNF622Q969S3 477 aaKnown RBP eCLIP4.21□□□□□ -1.741e-7■□□□□ 9.8
CDC27-216ENST00000574304 FNBP1Q96RU3 617 aa4.21□□□□□ -1.74
CDC27-216ENST00000574304 MRPL1Q9BYD6 325 aaKnown RBP4.21□□□□□ -1.74
CDC27-216ENST00000574304 PDE7BQ9NP56 450 aa4.21□□□□□ -1.74
CDC27-216ENST00000574304 PLCXD1Q9NUJ7 323 aa4.21□□□□□ -1.74
CDC27-216ENST00000574304 MRPL15Q9P015 296 aaKnown RBP4.21□□□□□ -1.74
CDC27-216ENST00000574304 CACNG4Q9UBN1 327 aa4.21□□□□□ -1.74
CDC27-216ENST00000574304 GLOD5A6NK44 160 aa4.2□□□□□ -1.74
CDC27-216ENST00000574304 DNASE1P24855 282 aa4.2□□□□□ -1.74
CDC27-216ENST00000574304 ACTN2P35609 894 aa4.2□□□□□ -1.74
CDC27-216ENST00000574304 CDH13P55290 713 aa4.2□□□□□ -1.74
CDC27-216ENST00000574304 BAATQ14032 418 aaPredicted RBP4.2□□□□□ -1.74
CDC27-216ENST00000574304 PHLDA2Q53GA4 152 aa4.2□□□□□ -1.74
CDC27-216ENST00000574304 ELFN2Q5R3F8 820 aa4.2□□□□□ -1.74
CDC27-216ENST00000574304 RNASEH2BQ5TBB1 312 aaKnown RBP4.2□□□□□ -1.74
CDC27-216ENST00000574304 PSRC1Q6PGN9 363 aaPredicted RBP4.2□□□□□ -1.74
CDC27-216ENST00000574304 MYPOPQ86VE0 399 aaPredicted RBP4.2□□□□□ -1.74
CDC27-216ENST00000574304 MAPK1IP1LQ8NDC0 245 aa4.2□□□□□ -1.74
CDC27-216ENST00000574304 NPEPL1Q8NDH3 523 aa4.2□□□□□ -1.74
CDC27-216ENST00000574304 POM121L2Q96KW2 1035 aa4.2□□□□□ -1.74
CDC27-216ENST00000574304 NUP85Q9BW27 656 aa4.2□□□□□ -1.74
CDC27-216ENST00000574304 CCDC68Q9H2F9 335 aa4.2□□□□□ -1.74
CDC27-216ENST00000574304 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.2□□□□□ -1.74
CDC27-216ENST00000574304 SERINC1Q9NRX5 453 aa4.2□□□□□ -1.74
CDC27-216ENST00000574304 EXOGQ9Y2C4 368 aaKnown RBP4.2□□□□□ -1.74
CDC27-216ENST00000574304 PRSS21Q9Y6M0 314 aa4.2□□□□□ -1.74
CDC27-216ENST00000574304 RNF215Q9Y6U7 377 aa4.2□□□□□ -1.74
CDC27-216ENST00000574304 FEZF1A0PJY2 475 aa4.19□□□□□ -1.74
CDC27-216ENST00000574304 NDUFAF8A1L188 74 aa4.19□□□□□ -1.74
CDC27-216ENST00000574304 ANKRD61A6NGH8 418 aa4.19□□□□□ -1.74
CDC27-216ENST00000574304 KLF11O14901 512 aa4.19□□□□□ -1.74
CDC27-216ENST00000574304 EXTL3O43909 919 aa4.19□□□□□ -1.74
CDC27-216ENST00000574304 BEST1O76090 585 aa4.19□□□□□ -1.74
CDC27-216ENST00000574304 GPIP06744 558 aa4.19□□□□□ -1.74
CDC27-216ENST00000574304 SLC6A12P48065 614 aa4.19□□□□□ -1.74
CDC27-216ENST00000574304 KRTAP10-12P60413 245 aa4.19□□□□□ -1.74
CDC27-216ENST00000574304 HERV-K104P61576 105 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms