RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 GOT2P00505 430 aaKnown RBP20.44■□□□□ 0.86
CHRNB1-206ENST00000574054 ACADLP28330 430 aa20.44■□□□□ 0.86
CHRNB1-206ENST00000574054 SNX1Q13596 522 aa20.44■□□□□ 0.86
CHRNB1-206ENST00000574054 OASLQ15646 514 aaKnown RBP20.44■□□□□ 0.86
CHRNB1-206ENST00000574054 DEFB110Q30KQ9 67 aa20.44■□□□□ 0.86
CHRNB1-206ENST00000574054 TSTD2Q5T7W7 516 aa20.44■□□□□ 0.86
CHRNB1-206ENST00000574054 TBC1D21Q8IYX1 336 aa20.44■□□□□ 0.86
CHRNB1-206ENST00000574054 GPR135Q8IZ08 494 aa20.44■□□□□ 0.86
CHRNB1-206ENST00000574054 OR6P1Q8NGX9 317 aa20.44■□□□□ 0.86
CHRNB1-206ENST00000574054 C1orf54Q8WWF1 131 aa20.44■□□□□ 0.86
CHRNB1-206ENST00000574054 SPHK1Q9NYA1 384 aa20.44■□□□□ 0.86
CHRNB1-206ENST00000574054 POLG2Q9UHN1 485 aa20.44■□□□□ 0.86
CHRNB1-206ENST00000574054 TCFL5Q9UL49 500 aa20.44■□□□□ 0.86
CHRNB1-206ENST00000574054 PLAGL1Q9UM63 463 aa20.44■□□□□ 0.86
CHRNB1-206ENST00000574054 SLC5A10A0PJK1 596 aa20.43■□□□□ 0.86
CHRNB1-206ENST00000574054 C9J4A7 227 aa20.43■□□□□ 0.86
CHRNB1-206ENST00000574054 BHMG1C9JSJ3 638 aaPredicted RBP20.43■□□□□ 0.86
CHRNB1-206ENST00000574054 F8W8V4 182 aa20.43■□□□□ 0.86
CHRNB1-206ENST00000574054 CHRM5P08912 532 aaPredicted RBP20.43■□□□□ 0.86
CHRNB1-206ENST00000574054 GRIA1P42261 906 aa20.43■□□□□ 0.86
CHRNB1-206ENST00000574054 PLOD1Q02809 727 aaPredicted RBP20.43■□□□□ 0.86
CHRNB1-206ENST00000574054 UBAP2LQ14157 1087 aaKnown RBP20.43■□□□□ 0.86
CHRNB1-206ENST00000574054 PRUNE1Q86TP1 453 aa20.43■□□□□ 0.86
CHRNB1-206ENST00000574054 RNF10Q8N5U6 811 aaKnown RBP20.43■□□□□ 0.86
CHRNB1-206ENST00000574054 OR5K2Q8NHB8 316 aa20.43■□□□□ 0.86
CHRNB1-206ENST00000574054 MIB2Q96AX9 1013 aa20.43■□□□□ 0.86
CHRNB1-206ENST00000574054 TCTN2Q96GX1 697 aa20.43■□□□□ 0.86
CHRNB1-206ENST00000574054 OR2A14Q96R47 310 aa20.43■□□□□ 0.86
CHRNB1-206ENST00000574054 FRMD8P1Q9BZ68 369 aaPredicted RBP20.43■□□□□ 0.86
CHRNB1-206ENST00000574054 RAB6BQ9NRW1 208 aa20.43■□□□□ 0.86
CHRNB1-206ENST00000574054 GUCA1BQ9UMX6 200 aa20.43■□□□□ 0.86
CHRNB1-206ENST00000574054 SPENQ96T58 3664 aaKnown RBP20.43■□□□□ 0.86
CHRNB1-206ENST00000574054 SUN1O94901 812 aa20.42■□□□□ 0.86
CHRNB1-206ENST00000574054 CAPN1P07384 714 aa20.42■□□□□ 0.86
CHRNB1-206ENST00000574054 HBQ1P09105 142 aa20.42■□□□□ 0.86
CHRNB1-206ENST00000574054 ETS1P14921 441 aa20.42■□□□□ 0.86
CHRNB1-206ENST00000574054 AGXTP21549 392 aa20.42■□□□□ 0.86
CHRNB1-206ENST00000574054 ADRA1DP25100 572 aa20.42■□□□□ 0.86
CHRNB1-206ENST00000574054 CDC25BP30305 580 aa20.42■□□□□ 0.86
CHRNB1-206ENST00000574054 NCF4Q15080 339 aa20.42■□□□□ 0.86
CHRNB1-206ENST00000574054 ZIC1Q15915 447 aa20.42■□□□□ 0.86
CHRNB1-206ENST00000574054 ATCAYQ86WG3 371 aa20.42■□□□□ 0.86
CHRNB1-206ENST00000574054 SLC13A5Q86YT5 568 aaPredicted RBP20.42■□□□□ 0.86
CHRNB1-206ENST00000574054 CCDC89Q8N998 374 aa20.42■□□□□ 0.86
CHRNB1-206ENST00000574054 OR4L1Q8NH43 312 aa20.42■□□□□ 0.86
CHRNB1-206ENST00000574054 ADAMTS17Q8TE56 1095 aa20.42■□□□□ 0.86
CHRNB1-206ENST00000574054 COL26A1Q96A83 441 aa20.42■□□□□ 0.86
CHRNB1-206ENST00000574054 ZNF778Q96MU6 729 aa20.42■□□□□ 0.86
CHRNB1-206ENST00000574054 TSGA10Q9BZW7 698 aa20.42■□□□□ 0.86
CHRNB1-206ENST00000574054 FAM60AQ9NP50 221 aa20.42■□□□□ 0.86
CHRNB1-206ENST00000574054 IRAK4Q9NWZ3 460 aa20.42■□□□□ 0.86
CHRNB1-206ENST00000574054 OR6C2Q9NZP2 312 aa20.42■□□□□ 0.86
CHRNB1-206ENST00000574054 MED13Q9UHV7 2174 aa20.42■□□□□ 0.86
CHRNB1-206ENST00000574054 TNRC6AQ8NDV7 1962 aaKnown RBP20.41■□□□□ 0.86
CHRNB1-206ENST00000574054 A0A0J9YY10 115 aa20.41■□□□□ 0.86
CHRNB1-206ENST00000574054 TTLL8A6PVC2 850 aa20.41■□□□□ 0.86
CHRNB1-206ENST00000574054 KDM1AO60341 852 aa20.41■□□□□ 0.86
CHRNB1-206ENST00000574054 OR2B3O76000 313 aa20.41■□□□□ 0.86
CHRNB1-206ENST00000574054 TMEM63AO94886 807 aa20.41■□□□□ 0.86
CHRNB1-206ENST00000574054 APRTP07741 180 aa20.41■□□□□ 0.86
CHRNB1-206ENST00000574054 PRAMEP78395 509 aa20.41■□□□□ 0.86
CHRNB1-206ENST00000574054 FASTKD1Q53R41 847 aaKnown RBP20.41■□□□□ 0.86
CHRNB1-206ENST00000574054 C1orf189Q5VU69 101 aa20.41■□□□□ 0.86
CHRNB1-206ENST00000574054 RANBP9Q96S59 729 aa20.41■□□□□ 0.86
CHRNB1-206ENST00000574054 DPH2Q9BQC3 489 aaPredicted RBP20.41■□□□□ 0.86
CHRNB1-206ENST00000574054 SPRTNQ9H040 489 aaPredicted RBP20.41■□□□□ 0.86
CHRNB1-206ENST00000574054 PADI2Q9Y2J8 665 aa20.41■□□□□ 0.86
CHRNB1-206ENST00000574054 TCAF1Q9Y4C2 921 aa20.41■□□□□ 0.86
CHRNB1-206ENST00000574054 PCDHGA9Q9Y5G4 932 aaKnown RBP20.41■□□□□ 0.86
CHRNB1-206ENST00000574054 USP9XQ93008 2570 aaPredicted RBP20.41■□□□□ 0.86
CHRNB1-206ENST00000574054 A6NL46 340 aa20.4■□□□□ 0.86
CHRNB1-206ENST00000574054 GOLGA6L6A8MZA4 724 aa20.4■□□□□ 0.86
CHRNB1-206ENST00000574054 ISM1B1AKI9 464 aa20.4■□□□□ 0.86
CHRNB1-206ENST00000574054 ZNF185O15231 689 aa20.4■□□□□ 0.86
CHRNB1-206ENST00000574054 TPBGLP0DKB5 382 aa20.4■□□□□ 0.86
CHRNB1-206ENST00000574054 PPARGP37231 505 aaPredicted RBP20.4■□□□□ 0.86
CHRNB1-206ENST00000574054 HSPA14Q0VDF9 509 aa20.4■□□□□ 0.86
CHRNB1-206ENST00000574054 ATP1A4Q13733 1029 aa20.4■□□□□ 0.86
CHRNB1-206ENST00000574054 DNAJC21Q5F1R6 531 aaKnown RBP20.4■□□□□ 0.86
CHRNB1-206ENST00000574054 ZNF534Q76KX8 674 aa20.4■□□□□ 0.86
CHRNB1-206ENST00000574054 NLRP9Q7RTR0 991 aa20.4■□□□□ 0.86
CHRNB1-206ENST00000574054 PPHLN1Q8NEY8 458 aaKnown RBP20.4■□□□□ 0.86
CHRNB1-206ENST00000574054 TSSK1BQ9BXA7 367 aa20.4■□□□□ 0.86
CHRNB1-206ENST00000574054 CASS4Q9NQ75 786 aa20.4■□□□□ 0.86
CHRNB1-206ENST00000574054 PAK5Q9P286 719 aa20.4■□□□□ 0.86
CHRNB1-206ENST00000574054 ANKMY1Q9P2S6 941 aa20.4■□□□□ 0.86
CHRNB1-206ENST00000574054 RIMKLBQ9ULI2 386 aa20.4■□□□□ 0.86
CHRNB1-206ENST00000574054 G3BP2Q9UN86 482 aaKnown RBP20.4■□□□□ 0.86
CHRNB1-206ENST00000574054 AP1M2Q9Y6Q5 423 aa20.4■□□□□ 0.86
CHRNB1-206ENST00000574054 UTP20O75691 2785 aaKnown RBP20.39■□□□□ 0.85
CHRNB1-206ENST00000574054 USP9YO00507 2555 aaPredicted RBP20.39■□□□□ 0.85
CHRNB1-206ENST00000574054 HCRTR1O43613 425 aa20.39■□□□□ 0.85
CHRNB1-206ENST00000574054 KRT86O43790 486 aa20.39■□□□□ 0.85
CHRNB1-206ENST00000574054 CBSLP0DN79 551 aa20.39■□□□□ 0.85
CHRNB1-206ENST00000574054 OTX2P32243 289 aa20.39■□□□□ 0.85
CHRNB1-206ENST00000574054 CCR7P32248 378 aa20.39■□□□□ 0.85
CHRNB1-206ENST00000574054 CBSP35520 551 aa20.39■□□□□ 0.85
CHRNB1-206ENST00000574054 SEMA3AQ14563 771 aa20.39■□□□□ 0.85
CHRNB1-206ENST00000574054 KIR2DS3Q14952 304 aa20.39■□□□□ 0.85
CHRNB1-206ENST00000574054 NADK2Q4G0N4 442 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms