RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 BRINP1O60477 761 aa15.36■□□□□ 0.05
CHD3-215ENST00000572750 VPS26AO75436 327 aa15.36■□□□□ 0.05
CHD3-215ENST00000572750 ITIH1P19827 911 aa15.36■□□□□ 0.05
CHD3-215ENST00000572750 BDKRB1P46663 353 aa15.36■□□□□ 0.05
CHD3-215ENST00000572750 CDKN2DP55273 166 aa15.36■□□□□ 0.05
CHD3-215ENST00000572750 ACSBG2Q5FVE4 666 aa15.36■□□□□ 0.05
CHD3-215ENST00000572750 FAM92BQ6ZTR7 304 aa15.36■□□□□ 0.05
CHD3-215ENST00000572750 RAB11FIP2Q7L804 512 aa15.36■□□□□ 0.05
CHD3-215ENST00000572750 STRA8Q7Z7C7 330 aa15.36■□□□□ 0.05
CHD3-215ENST00000572750 GALNT7Q86SF2 657 aa15.36■□□□□ 0.05
CHD3-215ENST00000572750 OOSP2Q86WS3 158 aa15.36■□□□□ 0.05
CHD3-215ENST00000572750 PLXDC1Q8IUK5 500 aa15.36■□□□□ 0.05
CHD3-215ENST00000572750 GPATCH11Q8N954 259 aa15.36■□□□□ 0.05
CHD3-215ENST00000572750 OR4E2Q8NGC2 313 aa15.36■□□□□ 0.05
CHD3-215ENST00000572750 WDR36Q8NI36 951 aaKnown RBP15.36■□□□□ 0.05
CHD3-215ENST00000572750 CD200R1Q8TD46 325 aa15.36■□□□□ 0.05
CHD3-215ENST00000572750 ZFPM2Q8WW38 1151 aa15.36■□□□□ 0.05
CHD3-215ENST00000572750 GRAMD1AQ96CP6 724 aa15.36■□□□□ 0.05
CHD3-215ENST00000572750 FMO2Q99518 471 aa15.36■□□□□ 0.05
CHD3-215ENST00000572750 POLR1BQ9H9Y6 1135 aa15.36■□□□□ 0.05
CHD3-215ENST00000572750 MTRF1LQ9UGC7 380 aaKnown RBP15.36■□□□□ 0.05
CHD3-215ENST00000572750 ICKQ9UPZ9 632 aa15.36■□□□□ 0.05
CHD3-215ENST00000572750 COMMD10Q9Y6G5 202 aa15.36■□□□□ 0.05
CHD3-215ENST00000572750 USP9XQ93008 2570 aaPredicted RBP15.36■□□□□ 0.05
CHD3-215ENST00000572750 A0A087WV48 116 aa15.35■□□□□ 0.05
CHD3-215ENST00000572750 CXorf49A8MYA2 514 aaPredicted RBP15.35■□□□□ 0.05
CHD3-215ENST00000572750 PLD2O14939 933 aa15.35■□□□□ 0.05
CHD3-215ENST00000572750 KIF1CO43896 1103 aaKnown RBP15.35■□□□□ 0.05
CHD3-215ENST00000572750 C9P02748 559 aa15.35■□□□□ 0.05
CHD3-215ENST00000572750 TPBGLP0DKB5 382 aa15.35■□□□□ 0.05
CHD3-215ENST00000572750 ATP5DP30049 168 aa15.35■□□□□ 0.05
CHD3-215ENST00000572750 PGGT1BP53609 377 aa15.35■□□□□ 0.05
CHD3-215ENST00000572750 TIAL1Q01085 375 aaKnown RBP eCLIP15.35■□□□□ 0.05
CHD3-215ENST00000572750 CYP4F3Q08477 520 aa15.35■□□□□ 0.05
CHD3-215ENST00000572750 RTP5Q14D33 572 aa15.35■□□□□ 0.05
CHD3-215ENST00000572750 TTLL9Q3SXZ7 439 aa15.35■□□□□ 0.05
CHD3-215ENST00000572750 UBAP2Q5T6F2 1119 aaKnown RBP15.35■□□□□ 0.05
CHD3-215ENST00000572750 KLHL35Q6PF15 583 aa15.35■□□□□ 0.05
CHD3-215ENST00000572750 UNC5DQ6UXZ4 953 aa15.35■□□□□ 0.05
CHD3-215ENST00000572750 C3orf62Q6ZUJ4 267 aa15.35■□□□□ 0.05
CHD3-215ENST00000572750 DCUN1D3Q8IWE4 304 aa15.35■□□□□ 0.05
CHD3-215ENST00000572750 CPNE9Q8IYJ1 553 aa15.35■□□□□ 0.05
CHD3-215ENST00000572750 TBC1D21Q8IYX1 336 aa15.35■□□□□ 0.05
CHD3-215ENST00000572750 FAM129AQ9BZQ8 928 aa15.35■□□□□ 0.05
CHD3-215ENST00000572750 SRMSQ9H3Y6 488 aa15.35■□□□□ 0.05
CHD3-215ENST00000572750 LRRC4CQ9HCJ2 640 aa15.35■□□□□ 0.05
CHD3-215ENST00000572750 HRASLS2Q9NWW9 162 aa15.35■□□□□ 0.05
CHD3-215ENST00000572750 PDP2Q9P2J9 529 aa15.35■□□□□ 0.05
CHD3-215ENST00000572750 PISDQ9UG56 409 aa15.35■□□□□ 0.05
CHD3-215ENST00000572750 TRMT6Q9UJA5 497 aaKnown RBP15.35■□□□□ 0.05
CHD3-215ENST00000572750 GSAPA4D1B5 854 aa15.34■□□□□ 0.05
CHD3-215ENST00000572750 TK2O00142 265 aa15.34■□□□□ 0.05
CHD3-215ENST00000572750 BTN3A1O00481 513 aa15.34■□□□□ 0.05
CHD3-215ENST00000572750 HGSO14964 777 aaPredicted RBP15.34■□□□□ 0.05
CHD3-215ENST00000572750 ATXN7O15265 892 aaPredicted RBP15.34■□□□□ 0.05
CHD3-215ENST00000572750 RASSF9O75901 435 aa15.34■□□□□ 0.05
CHD3-215ENST00000572750 C1QAP02745 245 aa15.34■□□□□ 0.05
CHD3-215ENST00000572750 RPN2P04844 631 aa15.34■□□□□ 0.05
CHD3-215ENST00000572750 JMJD7P0C870 316 aa15.34■□□□□ 0.05
CHD3-215ENST00000572750 POLR2CP19387 275 aaPredicted RBP15.34■□□□□ 0.05
CHD3-215ENST00000572750 MCM3P25205 808 aa15.34■□□□□ 0.05
CHD3-215ENST00000572750 ETV5P41161 510 aa15.34■□□□□ 0.05
CHD3-215ENST00000572750 LSSP48449 732 aa15.34■□□□□ 0.05
CHD3-215ENST00000572750 EIF3IQ13347 325 aaKnown RBP15.34■□□□□ 0.05
CHD3-215ENST00000572750 TRA2AQ13595 282 aaKnown RBP eCLIP15.34■□□□□ 0.05
CHD3-215ENST00000572750 EFTUD2Q15029 972 aaKnown RBP eCLIP15.34■□□□□ 0.05
CHD3-215ENST00000572750 KLHL38Q2WGJ6 581 aa15.34■□□□□ 0.05
CHD3-215ENST00000572750 TEX35Q5T0J7 233 aa15.34■□□□□ 0.05
CHD3-215ENST00000572750 HECTD2Q5U5R9 776 aa15.34■□□□□ 0.05
CHD3-215ENST00000572750 ZNF605Q86T29 641 aa15.34■□□□□ 0.05
CHD3-215ENST00000572750 SLC26A11Q86WA9 606 aa15.34■□□□□ 0.05
CHD3-215ENST00000572750 AMIGO1Q86WK6 493 aa15.34■□□□□ 0.05
CHD3-215ENST00000572750 FAM129CQ86XR2 697 aa15.34■□□□□ 0.05
CHD3-215ENST00000572750 FBXO39Q8N4B4 442 aa15.34■□□□□ 0.05
CHD3-215ENST00000572750 PRR11Q96HE9 360 aaPredicted RBP15.34■□□□□ 0.05
CHD3-215ENST00000572750 OLFM1Q99784 485 aa15.34■□□□□ 0.05
CHD3-215ENST00000572750 CMKLR1Q99788 373 aa15.34■□□□□ 0.05
CHD3-215ENST00000572750 TFB2MQ9H5Q4 396 aaKnown RBP15.34■□□□□ 0.05
CHD3-215ENST00000572750 LATS2Q9NRM7 1088 aa15.34■□□□□ 0.05
CHD3-215ENST00000572750 DKK4Q9UBT3 224 aa15.34■□□□□ 0.05
CHD3-215ENST00000572750 PCDHGA8Q9Y5G5 932 aa15.34■□□□□ 0.05
CHD3-215ENST00000572750 FAM159BA6NKW6 160 aa15.33■□□□□ 0.04
CHD3-215ENST00000572750 BTN3A3O00478 584 aa15.33■□□□□ 0.04
CHD3-215ENST00000572750 TNFSF15O95150 251 aa15.33■□□□□ 0.04
CHD3-215ENST00000572750 GSTA2P09210 222 aa15.33■□□□□ 0.04
CHD3-215ENST00000572750 CCL4P13236 92 aa15.33■□□□□ 0.04
CHD3-215ENST00000572750 STX2P32856 288 aa15.33■□□□□ 0.04
CHD3-215ENST00000572750 CSTF2P33240 577 aaKnown RBP eCLIP15.33■□□□□ 0.04
CHD3-215ENST00000572750 SHMT2P34897 504 aa15.33■□□□□ 0.04
CHD3-215ENST00000572750 SEPHS1P49903 392 aa15.33■□□□□ 0.04
CHD3-215ENST00000572750 GRB7Q14451 532 aa15.33■□□□□ 0.04
CHD3-215ENST00000572750 KBTBD12Q3ZCT8 623 aa15.33■□□□□ 0.04
CHD3-215ENST00000572750 CCSMST1Q4G0I0 132 aa15.33■□□□□ 0.04
CHD3-215ENST00000572750 ARMC6Q6NXE6 501 aa15.33■□□□□ 0.04
CHD3-215ENST00000572750 PIWIL4Q7Z3Z4 852 aaKnown RBP15.33■□□□□ 0.04
CHD3-215ENST00000572750 PRSS42Q7Z5A4 293 aa15.33■□□□□ 0.04
CHD3-215ENST00000572750 ARHGAP22Q7Z5H3 698 aa15.33■□□□□ 0.04
CHD3-215ENST00000572750 ZC3HC1Q86WB0 502 aaKnown RBP15.33■□□□□ 0.04
CHD3-215ENST00000572750 CTAGE3PQ8IX95 158 aa15.33■□□□□ 0.04
CHD3-215ENST00000572750 LMNTD1Q8N9Z9 388 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms