RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 AMER2Q8N7J2 671 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 C3orf20Q8ND61 904 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 ZNF397Q8NF99 534 aaPredicted RBP6.66□□□□□ -1.34
CHD3-213ENST00000571249 EXD1Q8NHP7 514 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 TEKT4Q8WW24 435 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 ASB5Q8WWX0 329 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 ZNF606Q8WXB4 792 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 NT5C3BQ969T7 300 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 CXorf40BQ96DE9 158 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 PPM1MQ96MI6 270 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 CEP63Q96MT8 703 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 CD180Q99467 661 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 BAG1Q99933 345 aaPredicted RBP6.66□□□□□ -1.34
CHD3-213ENST00000571249 MAGEB5Q9BZ81 275 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 ADAM19Q9H013 955 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 RETREG1Q9H6L5 497 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 VPS18Q9P253 973 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 IFT80Q9P2H3 777 aaPredicted RBP6.66□□□□□ -1.34
CHD3-213ENST00000571249 OR12D3Q9UGF7 316 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 NDOR1Q9UHB4 597 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 CDC23Q9UJX2 597 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 CBLCQ9ULV8 474 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 NUP210LQ5VU65 1888 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 PCM1Q15154 2024 aa6.66□□□□□ -1.34
CHD3-213ENST00000571249 A0A1W2PPR1 153 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 GOLGA6L9A6NEM1 432 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 NPIPB15A6NHN6 443 aaPredicted RBP6.65□□□□□ -1.34
CHD3-213ENST00000571249 MFAP3LO75121 409 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 ZRANB2O95218 330 aaKnown RBP eCLIP6.65□□□□□ -1.34
CHD3-213ENST00000571249 CNOT4O95628 575 aaKnown RBP6.65□□□□□ -1.34
CHD3-213ENST00000571249 GNA14O95837 355 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 GYPCP04921 128 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 TPM2P07951 284 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 CD63P08962 238 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 HBQ1P09105 142 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 CYP2A6P11509 494 aaPredicted RBP6.65□□□□□ -1.34
CHD3-213ENST00000571249 KRT5P13647 590 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 ZNF30P17039 623 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 BMP7P18075 431 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 RPL10P27635 214 aaKnown RBP6.65□□□□□ -1.34
CHD3-213ENST00000571249 ARSEP51690 589 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 FKBP3Q00688 224 aaKnown RBP6.65□□□□□ -1.34
CHD3-213ENST00000571249 DMTNQ08495 405 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 SLC25A52Q3SY17 297 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 CHRFAM7AQ494W8 412 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 KRTCAP3Q53RY4 240 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 HSP90AA4PQ58FG1 418 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 ZC3H12BQ5HYM0 836 aaKnown RBP6.65□□□□□ -1.34
CHD3-213ENST00000571249 KLHL35Q6PF15 583 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 SPATC1Q76KD6 591 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 NLRP8Q86W28 1048 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 PASD1Q8IV76 773 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 REXO1L1PQ8IX06 675 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 EID3Q8N140 333 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 GATAD2BQ8WXI9 593 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 HAS2Q92819 552 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 TBC1D31Q96DN5 1066 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 TSG101Q99816 390 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 TUBGCP2Q9BSJ2 902 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 RIOK2Q9BVS4 552 aaKnown RBP6.65□□□□□ -1.34
CHD3-213ENST00000571249 RMI1Q9H9A7 625 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 ACP6Q9NPH0 428 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 YAE1D1Q9NRH1 226 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 SEPT11Q9NVA2 429 aaKnown RBP6.65□□□□□ -1.34
CHD3-213ENST00000571249 HRASLS2Q9NWW9 162 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 TAB2Q9NYJ8 693 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 PTGFRNQ9P2B2 879 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 TRIM10Q9UDY6 481 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 SLC23A2Q9UGH3 650 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 SERTAD3Q9UJW9 196 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 CNOT6Q9ULM6 557 aaKnown RBP6.65□□□□□ -1.34
CHD3-213ENST00000571249 CAPN11Q9UMQ6 739 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 NEU3Q9UQ49 428 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 CDYLQ9Y232 598 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 DNAJC16Q9Y2G8 782 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 ASB1Q9Y576 335 aa6.65□□□□□ -1.34
CHD3-213ENST00000571249 USP27XA6NNY8 438 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 E7EQ34 232 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 J3KR12 359 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 SIAH2O43255 324 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 ZSCAN12O43309 604 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 NUAK1O60285 661 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 MTA2O94776 668 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 LRIG2O94898 1065 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 TSPAN12O95859 305 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 WDPCPO95876 746 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 CPP00450 1065 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 PYGLP06737 847 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 TPM1P09493 284 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 FAM157CP0CG43 387 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 EPB41P11171 864 aaKnown RBP6.64□□□□□ -1.35
CHD3-213ENST00000571249 CPEP16870 476 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 ZNF8P17098 575 aaPredicted RBP6.64□□□□□ -1.35
CHD3-213ENST00000571249 MX2P20592 715 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 MMP11P24347 488 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 GPC1P35052 558 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 CHRNA4P43681 627 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 PREPP48147 710 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 SCNN1BP51168 640 aa6.64□□□□□ -1.35
CHD3-213ENST00000571249 DRG2P55039 364 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms