RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 ZZZ3Q8IYH5 903 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 C10orf67Q8IYJ2 551 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 MCOLN2Q8IZK6 566 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 ZDHHC14Q8IZN3 488 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 ZNF295-AS1Q8N0V1 137 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 ARMC10Q8N2F6 343 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 MMGT1Q8N4V1 131 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 CISD2Q8N5K1 135 aaKnown RBP3.5□□□□□ -1.85
SMG6-208ENST00000570874 COMMD1Q8N668 190 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 SLC15A4Q8N697 577 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 ZNF784Q8NCA9 323 aaPredicted RBP3.5□□□□□ -1.85
SMG6-208ENST00000570874 BPIFCQ8NFQ6 507 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 OR1N1Q8NGS0 311 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 PCDH19Q8TAB3 1148 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 UBA3Q8TBC4 463 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 ZNF564Q8TBZ8 553 aaPredicted RBP3.5□□□□□ -1.85
SMG6-208ENST00000570874 LKAAEAR1Q8TD35 194 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 HEXDCQ8WVB3 486 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 IRGQQ8WZA9 623 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 CPT1BQ92523 772 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 ALG3Q92685 438 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 P3H4Q92791 437 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 EDAQ92838 391 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 TANKQ92844 425 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 GFM2Q969S9 779 aaKnown RBP3.5□□□□□ -1.85
SMG6-208ENST00000570874 SPSB4Q96A44 273 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 LRRC46Q96FV0 321 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 RCC1LQ96I51 464 aaKnown RBP3.5□□□□□ -1.85
SMG6-208ENST00000570874 RAX2Q96IS3 184 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 SLC41A2Q96JW4 573 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 SUSD3Q96L08 255 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 ZFP42Q96MM3 310 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 CNTNAP3BQ96NU0 1288 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 DGAT2Q96PD7 388 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 CDRT15Q96T59 188 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 ELF4Q99607 663 aaPredicted RBP3.5□□□□□ -1.85
SMG6-208ENST00000570874 PIP5K1AQ99755 562 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 SLC29A1Q99808 456 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 ACBD6Q9BR61 282 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 LRRC1Q9BTT6 524 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 TDRD1Q9BXT4 1180 aaKnown RBP3.5□□□□□ -1.85
SMG6-208ENST00000570874 KRTAP4-9Q9BYQ8 210 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 KRTAP4-2Q9BYR5 136 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 CNTNAP3Q9BZ76 1288 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 NUF2Q9BZD4 464 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 RTN4RQ9BZR6 473 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 DRC3Q9H069 523 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 RNF32Q9H0A6 362 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 RAB6CQ9H0N0 254 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 SMG9Q9H0W8 520 aaKnown RBP3.5□□□□□ -1.85
SMG6-208ENST00000570874 VCX2Q9H322 139 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 DPEP3Q9H4B8 488 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 UNKLQ9H9P5 680 aaKnown RBP3.5□□□□□ -1.85
SMG6-208ENST00000570874 SMURF1Q9HCE7 757 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 XPNPEP3Q9NQH7 507 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 G6PC2Q9NQR9 355 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 CISHQ9NSE2 258 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 FAM212BQ9NTI7 297 aaPredicted RBP3.5□□□□□ -1.85
SMG6-208ENST00000570874 SACM1LQ9NTJ5 587 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 ETNK2Q9NVF9 386 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 ARL8BQ9NVJ2 186 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 ASNSD1Q9NWL6 643 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 FAM118AQ9NWS6 357 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 CTTNBP2NLQ9P2B4 639 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 LRIT1Q9P2V4 623 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 CNOT8Q9UFF9 292 aaKnown RBP3.5□□□□□ -1.85
SMG6-208ENST00000570874 SRRDQ9UH36 339 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 FBXW2Q9UKT8 454 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 AMFRQ9UKV5 643 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 CNTN6Q9UQ52 1028 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 KCNE2Q9Y6J6 123 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 BRCA2P51587 3418 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 HTTP42858 3142 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 KIAA0100Q14667 2235 aaKnown RBP3.5□□□□□ -1.85
SMG6-208ENST00000570874 A0A087WZY1 265 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.49□□□□□ -1.85
SMG6-208ENST00000570874 TRBV2A0A0J9YWF9 115 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 A0A0U1RQV5 110 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 SMIM28A0A1B0GU29 152 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 TCRBV21S2A2A0A5A6 115 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 ARHGAP42A6NI28 874 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 FIGNL2A6NMB9 653 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 I3L4J1 428 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 M0QYV0 167 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 GFRA2O00451 464 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 CES2O00748 559 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 CTDSP2O14595 271 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 PTGESO14684 152 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 SMAD9O15198 467 aaKnown RBP3.49□□□□□ -1.85
SMG6-208ENST00000570874 KLK10O43240 276 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 RAD51CO43502 376 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 GATCO43716 136 aaKnown RBP3.49□□□□□ -1.85
SMG6-208ENST00000570874 SSX5O60225 188 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 B4GALT3O60512 393 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 TBX19O60806 448 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 B4GALT2O60909 372 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 ATP2C2O75185 946 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 SMIM24O75264 130 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 SERPINI2O75830 405 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 SASH3O75995 380 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms