RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 IGSF6O95976 241 aa8.58□□□□□ -1.04
LINC00558-201ENST00000569422 LDLRP01130 860 aa8.58□□□□□ -1.04
LINC00558-201ENST00000569422 ITPKAP23677 461 aa8.58□□□□□ -1.04
LINC00558-201ENST00000569422 EEF1B2P24534 225 aaKnown RBP8.58□□□□□ -1.04
LINC00558-201ENST00000569422 ACRV1P26436 265 aa8.58□□□□□ -1.04
LINC00558-201ENST00000569422 SERPINA4P29622 427 aa8.58□□□□□ -1.04
LINC00558-201ENST00000569422 NR1H2P55055 460 aa8.58□□□□□ -1.04
LINC00558-201ENST00000569422 RPL26P61254 145 aaKnown RBP8.58□□□□□ -1.04
LINC00558-201ENST00000569422 AP1S1P61966 158 aa8.58□□□□□ -1.04
LINC00558-201ENST00000569422 TRAF3Q13114 568 aa8.58□□□□□ -1.04
LINC00558-201ENST00000569422 TSTA3Q13630 321 aaPredicted RBP8.58□□□□□ -1.04
LINC00558-201ENST00000569422 DDX39BQ13838 428 aaKnown RBP8.58□□□□□ -1.04
LINC00558-201ENST00000569422 CERS6Q6ZMG9 384 aa8.58□□□□□ -1.04
LINC00558-201ENST00000569422 GCNT7Q6ZNI0 430 aa8.58□□□□□ -1.04
LINC00558-201ENST00000569422 OTOP2Q7RTS6 562 aa8.58□□□□□ -1.04
LINC00558-201ENST00000569422 HID1Q8IV36 788 aa8.58□□□□□ -1.04
LINC00558-201ENST00000569422 RGL4Q8IZJ4 473 aa8.58□□□□□ -1.04
LINC00558-201ENST00000569422 CLEC4FQ8N1N0 589 aa8.58□□□□□ -1.04
LINC00558-201ENST00000569422 DTWD1Q8N5C7 304 aa8.58□□□□□ -1.04
LINC00558-201ENST00000569422 FAM86B1Q8N7N1 296 aa8.58□□□□□ -1.04
LINC00558-201ENST00000569422 ZNF366Q8N895 744 aa8.58□□□□□ -1.04
LINC00558-201ENST00000569422 HIC2Q96JB3 615 aa8.58□□□□□ -1.04
LINC00558-201ENST00000569422 YME1L1Q96TA2 773 aa8.58□□□□□ -1.04
LINC00558-201ENST00000569422 DPY30Q9C005 99 aa8.58□□□□□ -1.04
LINC00558-201ENST00000569422 MTG2Q9H4K7 406 aa8.58□□□□□ -1.04
LINC00558-201ENST00000569422 LTB4R2Q9NPC1 389 aa8.58□□□□□ -1.04
LINC00558-201ENST00000569422 PNPLA3Q9NST1 481 aa8.58□□□□□ -1.04
LINC00558-201ENST00000569422 TMEM39AQ9NV64 488 aa8.58□□□□□ -1.04
LINC00558-201ENST00000569422 LIMD1Q9UGP4 676 aa8.58□□□□□ -1.04
LINC00558-201ENST00000569422 UTS2RQ9UKP6 389 aa8.58□□□□□ -1.04
LINC00558-201ENST00000569422 PCDHB1Q9Y5F3 818 aa8.58□□□□□ -1.04
LINC00558-201ENST00000569422 U3KQV3 271 aa8.58□□□□□ -1.04
LINC00558-201ENST00000569422 NEDD8-MDP1E9PL57 170 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 GNGT2O14610 69 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 ZNF254O75437 659 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 LRG1P02750 347 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 PIM1P11309 404 aaPredicted RBP8.57□□□□□ -1.04
LINC00558-201ENST00000569422 EFNA1P20827 205 aaPredicted RBP8.57□□□□□ -1.04
LINC00558-201ENST00000569422 SPAM1P38567 509 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 RPIAP49247 311 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 CENPAP49450 140 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 MAPKAPK3Q16644 382 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 PDCD4Q53EL6 469 aaKnown RBP8.57□□□□□ -1.04
LINC00558-201ENST00000569422 ZC3H12BQ5HYM0 836 aaKnown RBP8.57□□□□□ -1.04
LINC00558-201ENST00000569422 TPGS2Q68CL5 300 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 CRTC1Q6UUV9 634 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 B3GNT6Q6ZMB0 384 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 Q6ZVU0 165 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 STK32CQ86UX6 486 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 HS3ST5Q8IZT8 346 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 ITFG1Q8TB96 612 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 SORCS1Q8WY21 1168 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 TFAP2CQ92754 450 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 SCAMP4Q969E2 229 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 ZBTB18Q99592 522 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 CGREF1Q99674 301 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 DCUN1D5Q9BTE7 237 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 C9orf16Q9BUW7 83 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 BBS2Q9BXC9 721 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 LRRC3Q9BY71 257 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 ZIM2Q9NZV7 527 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 CNOT11Q9UKZ1 510 aaKnown RBP8.57□□□□□ -1.04
LINC00558-201ENST00000569422 WDR37Q9Y2I8 494 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 FADS3Q9Y5Q0 445 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 PRRT4C9JH25 899 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 H3BNH8 94 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 DLGAP1O14490 977 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 B4GAT1O43505 415 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 TGM5O43548 720 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 GREM1O60565 184 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 EPB42P16452 691 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 CCT8P50990 548 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 TXNL4AP83876 142 aaKnown RBP8.57□□□□□ -1.04
LINC00558-201ENST00000569422 IL1RL1Q01638 556 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 EMX2Q04743 252 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 LSAMPQ13449 338 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 SF1Q15637 639 aaKnown RBP8.57□□□□□ -1.04
LINC00558-201ENST00000569422 PGS1Q32NB8 556 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 TMEM259Q4ZIN3 620 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 WDR45BQ5MNZ6 344 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 ANKRD34AQ69YU3 496 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 CFAP161Q6P656 301 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 SERPINA13PQ6UXR4 307 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 LPCAT2Q7L5N7 544 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 SLC39A11Q8N1S5 342 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 CHST14Q8NCH0 376 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 OR2AP1Q8NGE2 309 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 SELENOMQ8WWX9 145 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 FOXJ1Q92949 421 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 HAUS8Q9BT25 410 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 CD244Q9BZW8 370 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 IKZF5Q9H5V7 419 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 CLK4Q9HAZ1 481 aaKnown RBP8.57□□□□□ -1.04
LINC00558-201ENST00000569422 IL21Q9HBE4 155 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 EIF3LQ9Y262 564 aaKnown RBP8.57□□□□□ -1.04
LINC00558-201ENST00000569422 PLXNA3P51805 1871 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 OR2AG2A6NM03 316 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 ZBBXA8MT70 800 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 RGS14O43566 566 aa8.57□□□□□ -1.04
LINC00558-201ENST00000569422 KDM1AO60341 852 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms