RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 SMIM23A6NLE4 172 aa16.27■□□□□ 0.2
COMMD4-224ENST00000568877 ARHGEF33A8MVX0 844 aa16.27■□□□□ 0.2
COMMD4-224ENST00000568877 RASGRF2O14827 1237 aa16.27■□□□□ 0.2
COMMD4-224ENST00000568877 CASC3O15234 703 aaKnown RBP16.27■□□□□ 0.2
COMMD4-224ENST00000568877 SLC16A5O15375 505 aa16.27■□□□□ 0.2
COMMD4-224ENST00000568877 ZBTB14O43829 449 aa16.27■□□□□ 0.2
COMMD4-224ENST00000568877 OPA1O60313 960 aa16.27■□□□□ 0.2
COMMD4-224ENST00000568877 KDM1AO60341 852 aa16.27■□□□□ 0.2
COMMD4-224ENST00000568877 CDH16O75309 829 aa16.27■□□□□ 0.2
COMMD4-224ENST00000568877 UBXN7O94888 489 aa16.27■□□□□ 0.2
COMMD4-224ENST00000568877 RPLP0P05388 317 aaKnown RBP16.27■□□□□ 0.2
COMMD4-224ENST00000568877 TPBGLP0DKB5 382 aa16.27■□□□□ 0.2
COMMD4-224ENST00000568877 AMD1P17707 334 aa16.27■□□□□ 0.2
COMMD4-224ENST00000568877 MAP4P27816 1152 aaKnown RBP16.27■□□□□ 0.2
COMMD4-224ENST00000568877 CD1CP29017 333 aa16.27■□□□□ 0.2
COMMD4-224ENST00000568877 MAGEA12P43365 314 aa16.27■□□□□ 0.2
COMMD4-224ENST00000568877 SP140Q13342 867 aa16.27■□□□□ 0.2
COMMD4-224ENST00000568877 GRB7Q14451 532 aa16.27■□□□□ 0.2
COMMD4-224ENST00000568877 AMZ1Q400G9 498 aa16.27■□□□□ 0.2
COMMD4-224ENST00000568877 CCSMST1Q4G0I0 132 aa16.27■□□□□ 0.2
COMMD4-224ENST00000568877 TAF1BQ53T94 588 aaPredicted RBP16.27■□□□□ 0.2
COMMD4-224ENST00000568877 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.27■□□□□ 0.2
COMMD4-224ENST00000568877 PPM1JQ5JR12 505 aa16.27■□□□□ 0.2
COMMD4-224ENST00000568877 NKAIN2Q5VXU1 208 aa16.27■□□□□ 0.2
COMMD4-224ENST00000568877 TBC1D1Q86TI0 1168 aaPredicted RBP16.27■□□□□ 0.2
COMMD4-224ENST00000568877 IQCKQ8N0W5 287 aa16.27■□□□□ 0.2
COMMD4-224ENST00000568877 SPATA6LQ8N4H0 392 aa16.27■□□□□ 0.2
COMMD4-224ENST00000568877 FBXO15Q8NCQ5 510 aaPredicted RBP16.27■□□□□ 0.2
COMMD4-224ENST00000568877 OR4E2Q8NGC2 313 aa16.27■□□□□ 0.2
COMMD4-224ENST00000568877 WDR48Q8TAF3 677 aa16.27■□□□□ 0.2
COMMD4-224ENST00000568877 AHCYL2Q96HN2 611 aaKnown RBP16.27■□□□□ 0.2
COMMD4-224ENST00000568877 SLC12A9Q9BXP2 914 aa16.27■□□□□ 0.2
COMMD4-224ENST00000568877 DERL2Q9GZP9 239 aa16.27■□□□□ 0.2
COMMD4-224ENST00000568877 EPB41L1Q9H4G0 881 aa16.27■□□□□ 0.2
COMMD4-224ENST00000568877 EURLQ9NYK6 297 aa16.27■□□□□ 0.2
COMMD4-224ENST00000568877 ADAMTS6Q9UKP5 1117 aa16.27■□□□□ 0.2
COMMD4-224ENST00000568877 IKZF3Q9UKT9 509 aa16.27■□□□□ 0.2
COMMD4-224ENST00000568877 PLAGL1Q9UM63 463 aa16.27■□□□□ 0.2
COMMD4-224ENST00000568877 PIEZO1Q92508 2521 aa16.26■□□□□ 0.19
COMMD4-224ENST00000568877 TLDC2A0PJX2 215 aa16.26■□□□□ 0.19
COMMD4-224ENST00000568877 BTN3A1O00481 513 aa16.26■□□□□ 0.19
COMMD4-224ENST00000568877 NTN3O00634 580 aaPredicted RBP16.26■□□□□ 0.19
COMMD4-224ENST00000568877 DUX1O43812 170 aa16.26■□□□□ 0.19
COMMD4-224ENST00000568877 MPOP05164 745 aa16.26■□□□□ 0.19
COMMD4-224ENST00000568877 PROS1P07225 676 aa16.26■□□□□ 0.19
COMMD4-224ENST00000568877 TYRP1P17643 537 aa16.26■□□□□ 0.19
COMMD4-224ENST00000568877 CYP2A7P20853 494 aa16.26■□□□□ 0.19
COMMD4-224ENST00000568877 KCNA4P22459 653 aa16.26■□□□□ 0.19
COMMD4-224ENST00000568877 SHMT2P34897 504 aa16.26■□□□□ 0.19
COMMD4-224ENST00000568877 GMPRP36959 345 aa16.26■□□□□ 0.19
COMMD4-224ENST00000568877 ID4P47928 161 aa16.26■□□□□ 0.19
COMMD4-224ENST00000568877 PPM1FP49593 454 aaPredicted RBP16.26■□□□□ 0.19
COMMD4-224ENST00000568877 ATP6V0D1P61421 351 aa16.26■□□□□ 0.19
COMMD4-224ENST00000568877 SQSTM1Q13501 440 aa16.26■□□□□ 0.19
COMMD4-224ENST00000568877 CSHL1Q14406 222 aa16.26■□□□□ 0.19
COMMD4-224ENST00000568877 KLHL35Q6PF15 583 aa16.26■□□□□ 0.19
COMMD4-224ENST00000568877 DHRS13Q6UX07 377 aa16.26■□□□□ 0.19
COMMD4-224ENST00000568877 AMIGO1Q86WK6 493 aa16.26■□□□□ 0.19
COMMD4-224ENST00000568877 OR9A1PQ8NGU1 263 aa16.26■□□□□ 0.19
COMMD4-224ENST00000568877 MZB1Q8WU39 189 aa16.26■□□□□ 0.19
COMMD4-224ENST00000568877 DLG3Q92796 817 aa16.26■□□□□ 0.19
COMMD4-224ENST00000568877 NRTNQ99748 197 aa16.26■□□□□ 0.19
COMMD4-224ENST00000568877 TMEM109Q9BVC6 243 aa16.26■□□□□ 0.19
COMMD4-224ENST00000568877 VPS11Q9H270 941 aa16.26■□□□□ 0.19
COMMD4-224ENST00000568877 SRMSQ9H3Y6 488 aa16.26■□□□□ 0.19
COMMD4-224ENST00000568877 XKR8Q9H6D3 395 aa16.26■□□□□ 0.19
COMMD4-224ENST00000568877 SYNDIG1Q9H7V2 258 aa16.26■□□□□ 0.19
COMMD4-224ENST00000568877 PARVBQ9HBI1 364 aa16.26■□□□□ 0.19
COMMD4-224ENST00000568877 ARGLU1Q9NWB6 273 aaPredicted RBP16.26■□□□□ 0.19
COMMD4-224ENST00000568877 OGFRQ9NZT2 677 aa16.26■□□□□ 0.19
COMMD4-224ENST00000568877 CIDEBQ9UHD4 219 aa16.26■□□□□ 0.19
COMMD4-224ENST00000568877 ICKQ9UPZ9 632 aa16.26■□□□□ 0.19
COMMD4-224ENST00000568877 FAM221BA6H8Z2 402 aa16.25■□□□□ 0.19
COMMD4-224ENST00000568877 OR6C74A6NCV1 312 aa16.25■□□□□ 0.19
COMMD4-224ENST00000568877 NPEPPSL1A6NEC2 478 aa16.25■□□□□ 0.19
COMMD4-224ENST00000568877 MYO1CO00159 1063 aa16.25■□□□□ 0.19
COMMD4-224ENST00000568877 CDC7O00311 574 aa16.25■□□□□ 0.19
COMMD4-224ENST00000568877 RFPL1O75677 317 aa16.25■□□□□ 0.19
COMMD4-224ENST00000568877 LTA4HP09960 611 aaKnown RBP16.25■□□□□ 0.19
COMMD4-224ENST00000568877 CD1DP15813 335 aa16.25■□□□□ 0.19
COMMD4-224ENST00000568877 RAB28P51157 221 aa16.25■□□□□ 0.19
COMMD4-224ENST00000568877 IRF9Q00978 393 aa16.25■□□□□ 0.19
COMMD4-224ENST00000568877 INSM1Q01101 510 aaPredicted RBP16.25■□□□□ 0.19
COMMD4-224ENST00000568877 DLG1Q12959 904 aa16.25■□□□□ 0.19
COMMD4-224ENST00000568877 CLPPQ16740 277 aaPredicted RBP16.25■□□□□ 0.19
COMMD4-224ENST00000568877 USP53Q70EK8 1073 aa16.25■□□□□ 0.19
COMMD4-224ENST00000568877 CYP4X1Q8N118 509 aa16.25■□□□□ 0.19
COMMD4-224ENST00000568877 RIBC1Q8N443 379 aaPredicted RBP16.25■□□□□ 0.19
COMMD4-224ENST00000568877 MCOLN3Q8TDD5 553 aa16.25■□□□□ 0.19
COMMD4-224ENST00000568877 NCSTNQ92542 709 aa16.25■□□□□ 0.19
COMMD4-224ENST00000568877 CABS1Q96KC9 395 aa16.25■□□□□ 0.19
COMMD4-224ENST00000568877 GFM1Q96RP9 751 aaKnown RBP16.25■□□□□ 0.19
COMMD4-224ENST00000568877 PKP4Q99569 1192 aa16.25■□□□□ 0.19
COMMD4-224ENST00000568877 MENTQ9BUN1 341 aa16.25■□□□□ 0.19
COMMD4-224ENST00000568877 UNKQ9C0B0 810 aaKnown RBP16.25■□□□□ 0.19
COMMD4-224ENST00000568877 IGSF5Q9NSI5 407 aa16.25■□□□□ 0.19
COMMD4-224ENST00000568877 OR6C2Q9NZP2 312 aa16.25■□□□□ 0.19
COMMD4-224ENST00000568877 ATXN7L1Q9ULK2 861 aaPredicted RBP16.25■□□□□ 0.19
COMMD4-224ENST00000568877 NOVA2Q9UNW9 492 aaKnown RBP16.25■□□□□ 0.19
COMMD4-224ENST00000568877 PDE10AQ9Y233 779 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms