RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 ABATP80404 500 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 ZNF267Q14586 743 aaPredicted RBP10.7□□□□□ -0.7
PALB2-206ENST00000568219 OR2T5Q6IEZ7 315 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 GPRIN1Q7Z2K8 1008 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 NRARPQ7Z6K4 114 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 DCP2Q8IU60 420 aaKnown RBP10.7□□□□□ -0.7
PALB2-206ENST00000568219 OR2T29Q8NH02 315 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 ADAMTS16Q8TE57 1224 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 SLC30A2Q9BRI3 323 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 SLC25A51Q9H1U9 297 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 LRTM1Q9HBL6 345 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 ARL15Q9NXU5 204 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 COMMD3Q9UBI1 195 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 PCDHGB6Q9Y5F9 930 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 N6AMT1Q9Y5N5 214 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 KIAA1551Q9HCM1 1747 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 FAM155AB1AL88 458 aaPredicted RBP10.7□□□□□ -0.7
PALB2-206ENST00000568219 C22orf31O95567 290 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 OTCP00480 354 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 CD1DP15813 335 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 CTPS1P17812 591 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 MC4RP32245 332 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 PTGS2P35354 604 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 GP2P55259 537 aaKnown RBP10.7□□□□□ -0.7
PALB2-206ENST00000568219 HSPA14Q0VDF9 509 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 C1DQ13901 141 aaKnown RBP10.7□□□□□ -0.7
PALB2-206ENST00000568219 RFTN2Q52LD8 501 aaPredicted RBP10.7□□□□□ -0.7
PALB2-206ENST00000568219 SIRPB2Q5JXA9 342 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 SMYD5Q6GMV2 418 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 HMGCLL1Q8TB92 370 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 SLC38A4Q969I6 547 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 MAELQ96JY0 434 aaKnown RBP10.7□□□□□ -0.7
PALB2-206ENST00000568219 MRGPRX2Q96LB1 330 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 ZNF641Q96N77 438 aaPredicted RBP10.7□□□□□ -0.7
PALB2-206ENST00000568219 AMBRA1Q9C0C7 1298 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 AIG1Q9NVV5 245 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 C1orf109Q9NX04 203 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 MAT2BQ9NZL9 334 aa10.7□□□□□ -0.7
PALB2-206ENST00000568219 PKMP14618 531 aaKnown RBP10.69□□□□□ -0.7
PALB2-206ENST00000568219 SCNN1GP51170 649 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 PTPN5P54829 565 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 IFITM3Q01628 133 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 CCDC58Q4VC31 144 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 DDI2Q5TDH0 399 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 RBM23Q86U06 439 aaKnown RBP10.69□□□□□ -0.7
PALB2-206ENST00000568219 STK40Q8N2I9 435 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 DTX3Q8N9I9 347 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 OR7G1Q8NGA0 311 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 SAMD4AQ9UPU9 718 aaKnown RBP10.69□□□□□ -0.7
PALB2-206ENST00000568219 ITM2BQ9Y287 266 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 UBR2Q8IWV8 1755 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 CNTNAP1P78357 1384 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 C5orf58C9J3I9 102 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 E9PAM4 449 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 MYL12BO14950 172 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 ERN1O75460 977 aaKnown RBP10.69□□□□□ -0.7
PALB2-206ENST00000568219 STAU1O95793 577 aaKnown RBP10.69□□□□□ -0.7
PALB2-206ENST00000568219 S1PR4O95977 384 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 FOXM1Q08050 763 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 NFE2L1Q14494 772 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 PON2Q15165 354 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 FKBP1CQ5VVH2 108 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 RFPL4BQ6ZWI9 263 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 LUZP2Q86TE4 346 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 CCDC28AQ8IWP9 274 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 CRYBG2Q8N1P7 616 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 PARP16Q8N5Y8 322 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 GPR156Q8NFN8 814 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 OR4F6Q8NGB9 312 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 OR6K2Q8NGY2 324 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 NETO1Q8TDF5 533 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 PCNPQ8WW12 178 aaKnown RBP10.69□□□□□ -0.7
PALB2-206ENST00000568219 TMCO6Q96DC7 493 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 ADGRE3Q9BY15 652 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 SCUBE2Q9NQ36 999 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 CCDC177Q9NQR7 707 aaPredicted RBP10.69□□□□□ -0.7
PALB2-206ENST00000568219 PLSCR3Q9NRY6 295 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 POLR3BQ9NW08 1133 aaPredicted RBP10.69□□□□□ -0.7
PALB2-206ENST00000568219 ING3Q9NXR8 418 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 GPR83Q9NYM4 423 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 CLEC4AQ9UMR7 237 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 DDX60Q8IY21 1712 aaKnown RBP10.69□□□□□ -0.7
PALB2-206ENST00000568219 ISPDA4D126 451 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 MGAT4DA6NG13 374 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 FXYD1O00168 92 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 SUV39H1O43463 412 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 PDE9AO76083 593 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 CKMT1AP12532 417 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 EPB42P16452 691 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 SEMG2Q02383 582 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 EMX2Q04743 252 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 MAD2L1Q13257 205 aaPredicted RBP10.69□□□□□ -0.7
PALB2-206ENST00000568219 KRT74Q7RTS7 529 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 LYSMD2Q8IV50 215 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 C12orf4Q9NQ89 552 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 AASDHPPTQ9NRN7 309 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 ZNF624Q9P2J8 865 aaPredicted RBP10.69□□□□□ -0.7
PALB2-206ENST00000568219 RPS6KA6Q9UK32 745 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 PCDHA9Q9Y5H5 950 aa10.69□□□□□ -0.7
PALB2-206ENST00000568219 A0A1B0GTL3 188 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms