RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 PRAMEF10O60809 474 aa12.62□□□□□ -0.39
CNOT1-213ENST00000568158 C1orf105O95561 183 aa12.62□□□□□ -0.39
CNOT1-213ENST00000568158 PRDX3P30048 256 aaKnown RBP12.62□□□□□ -0.39
CNOT1-213ENST00000568158 MAGEA4P43358 317 aa12.62□□□□□ -0.39
CNOT1-213ENST00000568158 GPX6P59796 221 aa12.62□□□□□ -0.39
CNOT1-213ENST00000568158 ERVPABLB-1P60509 514 aa12.62□□□□□ -0.39
CNOT1-213ENST00000568158 SH3BP2P78314 561 aa12.62□□□□□ -0.39
CNOT1-213ENST00000568158 MC2RQ01718 297 aa12.62□□□□□ -0.39
CNOT1-213ENST00000568158 FRG1Q14331 258 aaKnown RBP12.62□□□□□ -0.39
CNOT1-213ENST00000568158 GRB7Q14451 532 aa12.62□□□□□ -0.39
CNOT1-213ENST00000568158 KYNUQ16719 465 aa12.62□□□□□ -0.39
CNOT1-213ENST00000568158 IGF2-ASQ6U949 168 aa12.62□□□□□ -0.39
CNOT1-213ENST00000568158 CYHR1Q6ZMK1 362 aa12.62□□□□□ -0.39
CNOT1-213ENST00000568158 C3orf62Q6ZUJ4 267 aa12.62□□□□□ -0.39
CNOT1-213ENST00000568158 C2orf73Q8N5S3 287 aaPredicted RBP12.62□□□□□ -0.39
CNOT1-213ENST00000568158 BMPERQ8N8U9 685 aa12.62□□□□□ -0.39
CNOT1-213ENST00000568158 GIMAP7Q8NHV1 300 aa12.62□□□□□ -0.39
CNOT1-213ENST00000568158 GABPB2Q8TAK5 448 aaPredicted RBP12.62□□□□□ -0.39
CNOT1-213ENST00000568158 IFT81Q8WYA0 676 aa12.62□□□□□ -0.39
CNOT1-213ENST00000568158 KLHL6Q8WZ60 621 aa12.62□□□□□ -0.39
CNOT1-213ENST00000568158 INPP5DQ92835 1189 aa12.62□□□□□ -0.39
CNOT1-213ENST00000568158 PMEPA1Q969W9 287 aa12.62□□□□□ -0.39
CNOT1-213ENST00000568158 NAF1Q96HR8 494 aaKnown RBP12.62□□□□□ -0.39
CNOT1-213ENST00000568158 IL17FQ96PD4 163 aa12.62□□□□□ -0.39
CNOT1-213ENST00000568158 TAAR9Q96RI9 348 aa12.62□□□□□ -0.39
CNOT1-213ENST00000568158 CTRCQ99895 268 aa12.62□□□□□ -0.39
CNOT1-213ENST00000568158 APMAPQ9HDC9 416 aa12.62□□□□□ -0.39
CNOT1-213ENST00000568158 THSD1Q9NS62 852 aa12.62□□□□□ -0.39
CNOT1-213ENST00000568158 PSAT1Q9Y617 370 aa12.62□□□□□ -0.39
CNOT1-213ENST00000568158 COMMD10Q9Y6G5 202 aa12.62□□□□□ -0.39
CNOT1-213ENST00000568158 GSAPA4D1B5 854 aa12.61□□□□□ -0.39
CNOT1-213ENST00000568158 KRT87PA6NCN2 255 aa12.61□□□□□ -0.39
CNOT1-213ENST00000568158 CXorf49A8MYA2 514 aaPredicted RBP12.61□□□□□ -0.39
CNOT1-213ENST00000568158 C9orf172C9J069 976 aa12.61□□□□□ -0.39
CNOT1-213ENST00000568158 NVLO15381 856 aaKnown RBP12.61□□□□□ -0.39
CNOT1-213ENST00000568158 MATN4O95460 622 aa12.61□□□□□ -0.39
CNOT1-213ENST00000568158 ITGA2BP08514 1039 aa12.61□□□□□ -0.39
CNOT1-213ENST00000568158 MCM3P25205 808 aa12.61□□□□□ -0.39
CNOT1-213ENST00000568158 EIF2S3P41091 472 aaKnown RBP12.61□□□□□ -0.39
CNOT1-213ENST00000568158 BDKRB1P46663 353 aa12.61□□□□□ -0.39
CNOT1-213ENST00000568158 CDKN2DP55273 166 aa12.61□□□□□ -0.39
CNOT1-213ENST00000568158 PRKAA1Q13131 559 aa12.61□□□□□ -0.39
CNOT1-213ENST00000568158 GLE1Q53GS7 698 aaKnown RBP12.61□□□□□ -0.39
CNOT1-213ENST00000568158 DNTTIP2Q5QJE6 756 aaKnown RBP12.61□□□□□ -0.39
CNOT1-213ENST00000568158 ANKS6Q68DC2 871 aa12.61□□□□□ -0.39
CNOT1-213ENST00000568158 UNC5DQ6UXZ4 953 aa12.61□□□□□ -0.39
CNOT1-213ENST00000568158 KIAA0408Q6ZU52 694 aa12.61□□□□□ -0.39
CNOT1-213ENST00000568158 PRSS42Q7Z5A4 293 aa12.61□□□□□ -0.39
CNOT1-213ENST00000568158 CLEC14AQ86T13 490 aa12.61□□□□□ -0.39
CNOT1-213ENST00000568158 CPNE9Q8IYJ1 553 aa12.61□□□□□ -0.39
CNOT1-213ENST00000568158 LRRN4CLQ8ND94 238 aa12.61□□□□□ -0.39
CNOT1-213ENST00000568158 CD200R1Q8TD46 325 aa12.61□□□□□ -0.39
CNOT1-213ENST00000568158 KCNJ9Q92806 393 aa12.61□□□□□ -0.39
CNOT1-213ENST00000568158 RNF31Q96EP0 1072 aa12.61□□□□□ -0.39
CNOT1-213ENST00000568158 ZNF768Q9H5H4 540 aaKnown RBP12.61□□□□□ -0.39
CNOT1-213ENST00000568158 LRRC4CQ9HCJ2 640 aa12.61□□□□□ -0.39
CNOT1-213ENST00000568158 FAM114A2Q9NRY5 505 aa12.61□□□□□ -0.39
CNOT1-213ENST00000568158 SPHK1Q9NYA1 384 aa12.61□□□□□ -0.39
CNOT1-213ENST00000568158 ACTR10Q9NZ32 417 aa12.61□□□□□ -0.39
CNOT1-213ENST00000568158 FOXJ2Q9P0K8 574 aa12.61□□□□□ -0.39
CNOT1-213ENST00000568158 ZFATQ9P243 1243 aa12.61□□□□□ -0.39
CNOT1-213ENST00000568158 SEMA5BQ9P283 1151 aa12.61□□□□□ -0.39
CNOT1-213ENST00000568158 B3GALT1Q9Y5Z6 326 aa12.61□□□□□ -0.39
CNOT1-213ENST00000568158 MAP1BP46821 2468 aaKnown RBP12.61□□□□□ -0.39
CNOT1-213ENST00000568158 PIPSLA2A3N6 862 aa12.6□□□□□ -0.39
CNOT1-213ENST00000568158 SLC9B1P1A6NJY1 282 aa12.6□□□□□ -0.39
CNOT1-213ENST00000568158 B4E171 279 aa12.6□□□□□ -0.39
CNOT1-213ENST00000568158 TOX3O15405 576 aaPredicted RBP12.6□□□□□ -0.39
CNOT1-213ENST00000568158 VPS26AO75436 327 aa12.6□□□□□ -0.39
CNOT1-213ENST00000568158 ANKRD34CP0C6C1 535 aa12.6□□□□□ -0.39
CNOT1-213ENST00000568158 CDH3P22223 829 aa12.6□□□□□ -0.39
CNOT1-213ENST00000568158 SHMT2P34897 504 aa12.6□□□□□ -0.39
CNOT1-213ENST00000568158 TSPAN7P41732 249 aa12.6□□□□□ -0.39
CNOT1-213ENST00000568158 FOXM1Q08050 763 aa12.6□□□□□ -0.39
CNOT1-213ENST00000568158 KCNAB1Q14722 419 aa12.6□□□□□ -0.39
CNOT1-213ENST00000568158 TTLL9Q3SXZ7 439 aa12.6□□□□□ -0.39
CNOT1-213ENST00000568158 HECTD2Q5U5R9 776 aa12.6□□□□□ -0.39
CNOT1-213ENST00000568158 TTC23LQ6PF05 361 aa12.6□□□□□ -0.39
CNOT1-213ENST00000568158 PAQR3Q6TCH7 311 aa12.6□□□□□ -0.39
CNOT1-213ENST00000568158 STRA8Q7Z7C7 330 aa12.6□□□□□ -0.39
CNOT1-213ENST00000568158 ZFAND4Q86XD8 727 aa12.6□□□□□ -0.39
CNOT1-213ENST00000568158 FAM20CQ8IXL6 584 aa12.6□□□□□ -0.39
CNOT1-213ENST00000568158 GPATCH11Q8N954 259 aa12.6□□□□□ -0.39
CNOT1-213ENST00000568158 SNIP1Q8TAD8 396 aaKnown RBP12.6□□□□□ -0.39
CNOT1-213ENST00000568158 EEF1AKMT1Q8WVE0 214 aa12.6□□□□□ -0.39
CNOT1-213ENST00000568158 RAD51AP1Q96B01 352 aa12.6□□□□□ -0.39
CNOT1-213ENST00000568158 FOPNLQ96NB1 174 aa12.6□□□□□ -0.39
CNOT1-213ENST00000568158 OR2A14Q96R47 310 aa12.6□□□□□ -0.39
CNOT1-213ENST00000568158 MENTQ9BUN1 341 aa12.6□□□□□ -0.39
CNOT1-213ENST00000568158 KLHL25Q9H0H3 589 aa12.6□□□□□ -0.39
CNOT1-213ENST00000568158 FBXO8Q9NRD0 319 aa12.6□□□□□ -0.39
CNOT1-213ENST00000568158 KLHL42Q9P2K6 505 aa12.6□□□□□ -0.39
CNOT1-213ENST00000568158 POMT2Q9UKY4 750 aa12.6□□□□□ -0.39
CNOT1-213ENST00000568158 VWA7Q9Y334 891 aa12.6□□□□□ -0.39
CNOT1-213ENST00000568158 PCDHGA7Q9Y5G6 932 aa12.6□□□□□ -0.39
CNOT1-213ENST00000568158 PCM1Q15154 2024 aa12.6□□□□□ -0.39
CNOT1-213ENST00000568158 TLCD2A6NGC4 264 aa12.59□□□□□ -0.39
CNOT1-213ENST00000568158 C2orf74A8MZ97 194 aa12.59□□□□□ -0.39
CNOT1-213ENST00000568158 ISM1B1AKI9 464 aa12.59□□□□□ -0.39
CNOT1-213ENST00000568158 RPN2P04844 631 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms