RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 PTPN3P26045 913 aa4.39□□□□□ -1.71
SHCBP1-206ENST00000567698 SLC6A6P31641 620 aa4.39□□□□□ -1.71
SHCBP1-206ENST00000567698 SLC9A3P48764 834 aa4.39□□□□□ -1.71
SHCBP1-206ENST00000567698 LGALS3BPQ08380 585 aa4.39□□□□□ -1.71
SHCBP1-206ENST00000567698 PRPF4BQ13523 1007 aaKnown RBP4.39□□□□□ -1.71
SHCBP1-206ENST00000567698 CA9Q16790 459 aa4.39□□□□□ -1.71
SHCBP1-206ENST00000567698 ASPRV1Q53RT3 343 aa4.39□□□□□ -1.71
SHCBP1-206ENST00000567698 KRBOX4Q5JUW0 171 aa4.39□□□□□ -1.71
SHCBP1-206ENST00000567698 SLC27A1Q6PCB7 646 aa4.39□□□□□ -1.71
SHCBP1-206ENST00000567698 RBMS3Q6XE24 437 aaKnown RBP4.39□□□□□ -1.71
SHCBP1-206ENST00000567698 SLC26A9Q7LBE3 791 aa4.39□□□□□ -1.71
SHCBP1-206ENST00000567698 TRPT1Q86TN4 253 aaKnown RBP4.39□□□□□ -1.71
SHCBP1-206ENST00000567698 COMMD2Q86X83 199 aa4.39□□□□□ -1.71
SHCBP1-206ENST00000567698 OR1J1Q8NGS3 322 aa4.39□□□□□ -1.71
SHCBP1-206ENST00000567698 LRRC8CQ8TDW0 803 aa4.39□□□□□ -1.71
SHCBP1-206ENST00000567698 ZNF501Q96CX3 271 aaPredicted RBP4.39□□□□□ -1.71
SHCBP1-206ENST00000567698 RADILQ96JH8 1075 aa4.39□□□□□ -1.71
SHCBP1-206ENST00000567698 FAM129AQ9BZQ8 928 aa4.39□□□□□ -1.71
SHCBP1-206ENST00000567698 LAT2Q9GZY6 243 aa4.39□□□□□ -1.71
SHCBP1-206ENST00000567698 RABEP2Q9H5N1 569 aa4.39□□□□□ -1.71
SHCBP1-206ENST00000567698 UPF2Q9HAU5 1272 aaKnown RBP4.39□□□□□ -1.71
SHCBP1-206ENST00000567698 DPP3Q9NY33 737 aa4.39□□□□□ -1.71
SHCBP1-206ENST00000567698 COQ3Q9NZJ6 369 aa4.39□□□□□ -1.71
SHCBP1-206ENST00000567698 ZNF624Q9P2J8 865 aaPredicted RBP4.39□□□□□ -1.71
SHCBP1-206ENST00000567698 RNF150Q9ULK6 438 aa4.39□□□□□ -1.71
SHCBP1-206ENST00000567698 SLC7A7Q9UM01 511 aa4.39□□□□□ -1.71
SHCBP1-206ENST00000567698 A0A1W2PPK0 400 aa4.38□□□□□ -1.71
SHCBP1-206ENST00000567698 NEMP2A6NFY4 417 aa4.38□□□□□ -1.71
SHCBP1-206ENST00000567698 NADKO95544 446 aaPredicted RBP4.38□□□□□ -1.71
SHCBP1-206ENST00000567698 IGHV2-70P01814 119 aa4.38□□□□□ -1.71
SHCBP1-206ENST00000567698 HSP90AA1P07900 732 aaKnown RBP4.38□□□□□ -1.71
SHCBP1-206ENST00000567698 SMIM18P0DKX4 95 aa4.38□□□□□ -1.71
SHCBP1-206ENST00000567698 ACHEP22303 614 aa4.38□□□□□ -1.71
SHCBP1-206ENST00000567698 CA4P22748 312 aa4.38□□□□□ -1.71
SHCBP1-206ENST00000567698 ANOS1P23352 680 aa4.38□□□□□ -1.71
SHCBP1-206ENST00000567698 MTHFRP42898 656 aa4.38□□□□□ -1.71
SHCBP1-206ENST00000567698 MATR3P43243 847 aaKnown RBP eCLIP4.38□□□□□ -1.71
SHCBP1-206ENST00000567698 RPS18P62269 152 aaKnown RBP4.38□□□□□ -1.71
SHCBP1-206ENST00000567698 ACSM1Q08AH1 577 aa4.38□□□□□ -1.71
SHCBP1-206ENST00000567698 C1orf141Q5JVX7 400 aa4.38□□□□□ -1.71
SHCBP1-206ENST00000567698 DCAF10Q5QP82 559 aa4.38□□□□□ -1.71
SHCBP1-206ENST00000567698 CST9LP1Q5W188 147 aa4.38□□□□□ -1.71
SHCBP1-206ENST00000567698 ARHGAP17Q68EM7 881 aa4.38□□□□□ -1.71
SHCBP1-206ENST00000567698 BMPERQ8N8U9 685 aa4.38□□□□□ -1.71
SHCBP1-206ENST00000567698 SSMEM1Q8WWF3 244 aa4.38□□□□□ -1.71
SHCBP1-206ENST00000567698 TM9SF4Q92544 642 aa4.38□□□□□ -1.71
SHCBP1-206ENST00000567698 SECISBP2LQ93073 1101 aaKnown RBP4.38□□□□□ -1.71
SHCBP1-206ENST00000567698 VPS33AQ96AX1 596 aa4.38□□□□□ -1.71
SHCBP1-206ENST00000567698 RMDN1Q96DB5 314 aa4.38□□□□□ -1.71
SHCBP1-206ENST00000567698 STAMBPL1Q96FJ0 436 aa4.38□□□□□ -1.71
SHCBP1-206ENST00000567698 FEVQ99581 238 aa4.38□□□□□ -1.71
SHCBP1-206ENST00000567698 BAG1Q99933 345 aaPredicted RBP4.38□□□□□ -1.71
SHCBP1-206ENST00000567698 TRAF4Q9BUZ4 470 aaPredicted RBP4.38□□□□□ -1.71
SHCBP1-206ENST00000567698 PIH1D3Q9NQM4 214 aaKnown RBP4.38□□□□□ -1.71
SHCBP1-206ENST00000567698 SDR39U1Q9NRG7 319 aaPredicted RBP4.38□□□□□ -1.71
SHCBP1-206ENST00000567698 FAM118AQ9NWS6 357 aa4.38□□□□□ -1.71
SHCBP1-206ENST00000567698 IGLV9-49A0A0B4J1Y8 123 aa4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 DUXAA6NLW8 204 aa4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 MEIS2O14770 477 aa4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 GGPS1O95749 300 aa4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 ATP5BP06576 529 aaKnown RBP4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 OR52Z1P0C646 297 aa4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 CFC1BP0CG36 223 aa4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 CFC1P0CG37 223 aa4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 HAPLN1P10915 354 aaPredicted RBP4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 HSPA8P11142 646 aaKnown RBP4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 GNAZP19086 355 aa4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 CD22P20273 847 aa4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 PTGER4P35408 488 aa4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 GLIPR1P48060 266 aa4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 POLR2LP62875 67 aaKnown RBP4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 PHEXP78562 749 aa4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 RBPJQ06330 500 aa4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 ZNF415Q09FC8 603 aa4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 P2RY6Q15077 328 aa4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 HYAL4Q2M3T9 481 aa4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 ITPRIPL2Q3MIP1 535 aa4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 C9orf50Q5SZB4 431 aa4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 ARMC4Q5T2S8 1044 aa4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 PLA2G4FQ68DD2 849 aa4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 SLC35E4Q6ICL7 350 aa4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 KRT80Q6KB66 452 aa4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 NUP54Q7Z3B4 507 aa4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 ZNF554Q86TJ5 538 aa4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 TMEM139Q8IV31 216 aa4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 APLFQ8IW19 511 aaPredicted RBP4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 STPG4Q8N801 248 aa4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 OR11H4Q8NGC9 324 aa4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 ATL1Q8WXF7 558 aa4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 HDAC11Q96DB2 347 aa4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 CNDP2Q96KP4 475 aaKnown RBP4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 CPNE1Q99829 537 aa4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 NAA11Q9BSU3 229 aaPredicted RBP4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 S1PR5Q9H228 398 aa4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 SIX2Q9NPC8 291 aa4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 ADPRHL2Q9NX46 363 aa4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 SLC24A2Q9UI40 661 aa4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 DAPK2Q9UIK4 370 aa4.37□□□□□ -1.71
SHCBP1-206ENST00000567698 LOC101059948A0A1B0GTJ6 334 aa4.36□□□□□ -1.71
SHCBP1-206ENST00000567698 A0A1W2PN81 502 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms