RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 SPRTNQ9H040 489 aaPredicted RBP8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 SRMSQ9H3Y6 488 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 KIR3DX1Q9H7L2 352 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 ZWILCHQ9H900 591 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 PCDH9Q9HC56 1237 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 DNAJB12Q9NXW2 375 aaKnown RBP8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 UVRAGQ9P2Y5 699 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 PCSK1NQ9UHG2 260 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 ST6GALNAC2Q9UJ37 374 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 ACSL5Q9ULC5 683 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 NENFQ9UMX5 172 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 CFAP20Q9Y6A4 193 aaKnown RBP8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 STAB1Q9NY15 2570 aa8.72□□□□□ -1.01
VPS9D1-205ENST00000565452 SPTBP11277 2137 aa8.71□□□□□ -1.01
VPS9D1-205ENST00000565452 TCRBV5S1A1TA0A578 114 aa8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 TMCO5BA8MYB1 307 aa8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 E9PLN8 166 aa8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 ZRANB2O95218 330 aaKnown RBP eCLIP8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 CYP1A2P05177 515 aa8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 INHBBP09529 407 aa8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 TMEM253P0C7T8 217 aa8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 IGFBP2P18065 325 aa8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 MAGEA1P43355 309 aa8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 DGKQP52824 942 aa8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 FOXL2P58012 376 aa8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 DCDC1P59894 354 aa8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 RPL7AP62424 266 aaKnown RBP8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 MAMLD1Q13495 774 aa8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 TCEAL1Q15170 157 aa8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 RBBP7Q16576 425 aa8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 QPCTQ16769 361 aa8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 SLC5A12Q1EHB4 618 aa8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 LRRC8AQ8IWT6 810 aa8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 RHOT2Q8IXI1 618 aa8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 DMRTC2Q8IXT2 367 aaPredicted RBP8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 TAB3Q8N5C8 712 aaPredicted RBP8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 OR11G2Q8NGC1 345 aa8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 DENND1AQ8TEH3 1009 aa8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 LCN9Q8WX39 176 aa8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 CTNNBL1Q8WYA6 563 aaPredicted RBP8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 PDLIM2Q96JY6 352 aa8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 MCEEQ96PE7 176 aa8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 ALPK1Q96QP1 1244 aa8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 SMR3AQ99954 134 aa8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 VKORC1Q9BQB6 163 aa8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 TDRD1Q9BXT4 1180 aaKnown RBP8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 PITPNM3Q9BZ71 974 aa8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 WDR54Q9H977 334 aa8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 IRAK4Q9NWZ3 460 aa8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 TAS2R14Q9NYV8 317 aa8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 CWC15Q9P013 229 aaKnown RBP8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 PTGFRNQ9P2B2 879 aa8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 DHCR7Q9UBM7 475 aaKnown RBP8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 HEBP2Q9Y5Z4 205 aa8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 HS3ST3B1Q9Y662 390 aa8.71□□□□□ -1.02
VPS9D1-205ENST00000565452 TMEM191CA6NGB0 347 aa8.7□□□□□ -1.02
VPS9D1-205ENST00000565452 H3BRJ5 948 aa8.7□□□□□ -1.02
VPS9D1-205ENST00000565452 ZSCAN9O15535 394 aaPredicted RBP8.7□□□□□ -1.02
VPS9D1-205ENST00000565452 WFS1O76024 890 aa8.7□□□□□ -1.02
VPS9D1-205ENST00000565452 RNF8O76064 485 aa8.7□□□□□ -1.02
VPS9D1-205ENST00000565452 PRAMEF1O95521 474 aa8.7□□□□□ -1.02
VPS9D1-205ENST00000565452 HPP00738 406 aa8.7□□□□□ -1.02
VPS9D1-205ENST00000565452 UQCRHP07919 91 aa8.7□□□□□ -1.02
VPS9D1-205ENST00000565452 FDXRP22570 491 aa8.7□□□□□ -1.02
VPS9D1-205ENST00000565452 ARL4AP40617 200 aa8.7□□□□□ -1.02
VPS9D1-205ENST00000565452 ARHGAP25P42331 645 aa8.7□□□□□ -1.02
VPS9D1-205ENST00000565452 YBX1P67809 324 aaKnown RBP8.7□□□□□ -1.02
VPS9D1-205ENST00000565452 MYBPHQ13203 477 aa8.7□□□□□ -1.02
VPS9D1-205ENST00000565452 DPYSQ14117 519 aa8.7□□□□□ -1.02
VPS9D1-205ENST00000565452 PIGHQ14442 188 aaPredicted RBP8.7□□□□□ -1.02
VPS9D1-205ENST00000565452 TMEM220Q6QAJ8 160 aa8.7□□□□□ -1.02
VPS9D1-205ENST00000565452 CAMKMTQ7Z624 323 aa8.7□□□□□ -1.02
VPS9D1-205ENST00000565452 ZNF655Q8N720 491 aaPredicted RBP8.7□□□□□ -1.02
VPS9D1-205ENST00000565452 ACRBPQ8NEB7 543 aa8.7□□□□□ -1.02
VPS9D1-205ENST00000565452 AGAP11Q8TF27 550 aa8.7□□□□□ -1.02
VPS9D1-205ENST00000565452 ASB5Q8WWX0 329 aa8.7□□□□□ -1.02
VPS9D1-205ENST00000565452 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.7□□□□□ -1.02
VPS9D1-205ENST00000565452 FKBP10Q96AY3 582 aa8.7□□□□□ -1.02
VPS9D1-205ENST00000565452 ZNF653Q96CK0 615 aa8.7□□□□□ -1.02
VPS9D1-205ENST00000565452 C12orf66Q96MD2 445 aa8.7□□□□□ -1.02
VPS9D1-205ENST00000565452 VPS35Q96QK1 796 aa8.7□□□□□ -1.02
VPS9D1-205ENST00000565452 SNRNP25Q9BV90 132 aaKnown RBP8.7□□□□□ -1.02
VPS9D1-205ENST00000565452 ZCCHC2Q9C0B9 1178 aaKnown RBP8.7□□□□□ -1.02
VPS9D1-205ENST00000565452 KLHL25Q9H0H3 589 aa8.7□□□□□ -1.02
VPS9D1-205ENST00000565452 WWP1Q9H0M0 922 aa8.7□□□□□ -1.02
VPS9D1-205ENST00000565452 KCNJ16Q9NPI9 418 aa8.7□□□□□ -1.02
VPS9D1-205ENST00000565452 AMACRQ9UHK6 382 aa8.7□□□□□ -1.02
VPS9D1-205ENST00000565452 NXT1Q9UKK6 140 aaKnown RBP8.7□□□□□ -1.02
VPS9D1-205ENST00000565452 PPT2Q9UMR5 302 aa8.7□□□□□ -1.02
VPS9D1-205ENST00000565452 A0A0A6YYK5 440 aaPredicted RBP8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 KLHL33A6NCF5 533 aa8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 C2orf74A8MZ97 194 aa8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 FAM227AF5H4B4 570 aa8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 MYO1FO00160 1098 aa8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 PRRG2O14669 202 aa8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 PROM1O43490 865 aa8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 TSPAN12O95859 305 aa8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 HEXAP06865 529 aa8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 HOXD4P09016 255 aaPredicted RBP8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 PYGMP11217 842 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms