RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 ACADMP11310 421 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 GLULP15104 373 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 EIF2S3P41091 472 aaKnown RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 VIPR2P41587 438 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 MATKP42679 507 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 NSG1P42857 185 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 BTG3Q14201 252 aaPredicted RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 ELOAQ14241 798 aaKnown RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 GAS6Q14393 721 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 USP10Q14694 798 aaKnown RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 CYP51A1Q16850 503 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 EXOC3L2Q2M3D2 409 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 EIF2S3LQ2VIR3 472 aaKnown RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 EIPR1Q53HC9 387 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 SPANXN3Q5MJ09 141 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 MANEALQ5VSG8 457 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 LIN54Q6MZP7 749 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 FBXL22Q6P050 247 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 MAVSQ7Z434 540 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 SFTPA2Q8IWL1 248 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 C1orf174Q8IYL3 243 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 FSTL5Q8N475 847 aaPredicted RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 ABHD11Q8NFV4 315 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 OR6C4Q8NGE1 309 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 RAB7BQ96AH8 199 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 TRIM43Q96BQ3 446 aaPredicted RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 PTCD3Q96EY7 689 aaKnown RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 PIDD1Q9HB75 910 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 SNX15Q9NRS6 342 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 PLAGL1Q9UM63 463 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 COLEC10Q9Y6Z7 277 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 E9PAM4 449 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 SERPINE1P05121 402 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 LINC00032P0C843 101 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 CCL5P13501 91 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 CASRP41180 1078 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 SEC13P55735 322 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 CYP4F2P78329 520 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 GNA12Q03113 381 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 CYP4F3Q08477 520 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 BST1Q10588 318 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 CRYMQ14894 314 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 SUZ12Q15022 739 aaKnown RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 FAM124AQ86V42 546 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 ADAMTS19Q8TE59 1207 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 DNAJC1Q96KC8 554 aaKnown RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 SMAD5Q99717 465 aaKnown RBP3.3□□□□□ -1.88
CHD9-213ENST00000564845 ACAT2Q9BWD1 397 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 ALG9Q9H6U8 611 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 MS4A12Q9NXJ0 267 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 GALNT8Q9NY28 637 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 UTS2RQ9UKP6 389 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 PADI4Q9UM07 663 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 TESMINQ9Y4I5 508 aa3.3□□□□□ -1.88
CHD9-213ENST00000564845 COCHO43405 550 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 KRT75O95678 551 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 ALDH2P05091 517 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 DGKAP23743 735 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 ECI1P42126 302 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 ADAM17P78536 824 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 SLC25A52Q3SY17 297 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 KCTD21Q4G0X4 260 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 TTLL10Q6ZVT0 673 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 TRABD2AQ86V40 505 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 GALNT13Q8IUC8 556 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 ASCC1Q8N9N2 400 aaKnown RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 SIDT2Q8NBJ9 832 aaKnown RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 OR6Y1Q8NGX8 325 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 MRPS31Q92665 395 aaKnown RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 AMDHD1Q96NU7 426 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 QKIQ96PU8 341 aaKnown RBP eCLIP3.29□□□□□ -1.883e-8■■■■■ 31.6
CHD9-213ENST00000564845 SLC6A16Q9GZN6 736 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 TMCC3Q9ULS5 477 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 SMIM35A0A1B0GVV1 85 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 OR2AG2A6NM03 316 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 WASHC1A8K0Z3 465 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 PRKNO60260 465 aaPredicted RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 TRIM13O60858 407 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 LPLP06858 475 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 SLC10A3P09131 477 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 NCK1P16333 377 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 GTF2E2P29084 291 aaKnown RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 CDH5P33151 784 aaPredicted RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 ARFIP1P53367 373 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 TUBA1BP68363 451 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 TUBA3CQ13748 450 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 EFR3AQ14156 821 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 C9orf50Q5SZB4 431 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 PSAPL1Q6NUJ1 521 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 FAM151BQ6UXP7 276 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 WASH2PQ6VEQ5 465 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 TUBA1AQ71U36 451 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 OLIG3Q7RTU3 272 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 FAM220AQ7Z4H9 259 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 RBM12BQ8IXT5 1001 aaKnown RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 C7orf61Q8IZ16 206 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 FCGR1BQ92637 280 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 CDCA3Q99618 268 aaPredicted RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 PDCD10Q9BUL8 212 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 CLPBQ9H078 707 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms