RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 CTU1Q7Z7A3 348 aaKnown RBP7.48□□□□□ -1.21
ATXN3-249ENST00000564606 GPR149Q86SP6 731 aa7.48□□□□□ -1.21
ATXN3-249ENST00000564606 SERPINA11Q86U17 422 aa7.48□□□□□ -1.21
ATXN3-249ENST00000564606 HORMAD1Q86X24 394 aa7.48□□□□□ -1.21
ATXN3-249ENST00000564606 RASAL3Q86YV0 1011 aa7.48□□□□□ -1.21
ATXN3-249ENST00000564606 NPAS4Q8IUM7 802 aa7.48□□□□□ -1.21
ATXN3-249ENST00000564606 ZC3H7AQ8IWR0 971 aaKnown RBP7.48□□□□□ -1.21
ATXN3-249ENST00000564606 CPNE9Q8IYJ1 553 aa7.48□□□□□ -1.21
ATXN3-249ENST00000564606 NATD1Q8N6N6 113 aa7.48□□□□□ -1.21
ATXN3-249ENST00000564606 ATAD1Q8NBU5 361 aa7.48□□□□□ -1.21
ATXN3-249ENST00000564606 MDGA1Q8NFP4 955 aa7.48□□□□□ -1.21
ATXN3-249ENST00000564606 OR4F6Q8NGB9 312 aa7.48□□□□□ -1.21
ATXN3-249ENST00000564606 ISG20Q96AZ6 181 aaKnown RBP7.48□□□□□ -1.21
ATXN3-249ENST00000564606 CXorf40BQ96DE9 158 aa7.48□□□□□ -1.21
ATXN3-249ENST00000564606 MOCOSQ96EN8 888 aa7.48□□□□□ -1.21
ATXN3-249ENST00000564606 ZNF419Q96HQ0 510 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-249ENST00000564606 COG8Q96MW5 612 aa7.48□□□□□ -1.21
ATXN3-249ENST00000564606 NSUN5Q96P11 429 aaKnown RBP7.48□□□□□ -1.21
ATXN3-249ENST00000564606 NODALQ96S42 347 aa7.48□□□□□ -1.21
ATXN3-249ENST00000564606 ZNF347Q96SE7 839 aa7.48□□□□□ -1.21
ATXN3-249ENST00000564606 ACOX2Q99424 681 aa7.48□□□□□ -1.21
ATXN3-249ENST00000564606 COPS8Q99627 209 aa7.48□□□□□ -1.21
ATXN3-249ENST00000564606 SLC30A3Q99726 388 aa7.48□□□□□ -1.21
ATXN3-249ENST00000564606 SLC39A3Q9BRY0 314 aa7.48□□□□□ -1.21
ATXN3-249ENST00000564606 CIPCQ9C0C6 399 aa7.48□□□□□ -1.21
ATXN3-249ENST00000564606 SLC6A16Q9GZN6 736 aa7.48□□□□□ -1.21
ATXN3-249ENST00000564606 GABARAPL1Q9H0R8 117 aa7.48□□□□□ -1.21
ATXN3-249ENST00000564606 TRIT1Q9H3H1 467 aaKnown RBP7.48□□□□□ -1.21
ATXN3-249ENST00000564606 CLMPQ9H6B4 373 aa7.48□□□□□ -1.21
ATXN3-249ENST00000564606 ASB8Q9H765 288 aa7.48□□□□□ -1.21
ATXN3-249ENST00000564606 PREBQ9HCU5 417 aa7.48□□□□□ -1.21
ATXN3-249ENST00000564606 TM9SF3Q9HD45 589 aa7.48□□□□□ -1.21
ATXN3-249ENST00000564606 TNFRSF12AQ9NP84 129 aa7.48□□□□□ -1.21
ATXN3-249ENST00000564606 ACSS2Q9NR19 701 aa7.48□□□□□ -1.21
ATXN3-249ENST00000564606 DCAF13Q9NV06 445 aaKnown RBP7.48□□□□□ -1.21
ATXN3-249ENST00000564606 FAM118AQ9NWS6 357 aa7.48□□□□□ -1.21
ATXN3-249ENST00000564606 ADPRHL2Q9NX46 363 aa7.48□□□□□ -1.21
ATXN3-249ENST00000564606 KIAA1522Q9P206 1035 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-249ENST00000564606 KIF17Q9P2E2 1029 aa7.48□□□□□ -1.21
ATXN3-249ENST00000564606 PCDH10Q9P2E7 1040 aa7.48□□□□□ -1.21
ATXN3-249ENST00000564606 MTRRQ9UBK8 725 aa7.48□□□□□ -1.21
ATXN3-249ENST00000564606 ZNF490Q9ULM2 529 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-249ENST00000564606 POLR3HQ9Y535 204 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-249ENST00000564606 KCTD3Q9Y597 815 aa7.48□□□□□ -1.21
ATXN3-249ENST00000564606 TDRD15B5MCY1 1934 aaKnown RBP7.48□□□□□ -1.21
ATXN3-249ENST00000564606 MIA3Q5JRA6 1907 aa7.48□□□□□ -1.21
ATXN3-249ENST00000564606 NUP205Q92621 2012 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 TRBV5-4A0A0C4DH59 114 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 PNMA8CA0A1B0GUJ8 204 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 LOC100130705A0A1B0GUX0 176 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 ZNF840PA6NDX5 716 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 ZNF99A8MXY4 864 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-249ENST00000564606 PLK4O00444 970 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 BCKDKO14874 412 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 HS6ST1O60243 411 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 MPZL2O60487 215 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 NIPSNAP2O75323 286 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 CREG1O75629 220 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 SLC25A14O95258 325 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-249ENST00000564606 PRAMEF1O95521 474 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 FGF19O95750 216 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 TSPAN12O95859 305 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 FTH1P02794 183 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 CYP2A6P11509 494 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-249ENST00000564606 MTHFD1P11586 935 aaKnown RBP7.47□□□□□ -1.21
ATXN3-249ENST00000564606 ZNF30P17039 623 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 CTPS1P17812 591 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 POLR2EP19388 210 aaKnown RBP7.47□□□□□ -1.21
ATXN3-249ENST00000564606 FPR1P21462 350 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 CRHBPP24387 322 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 ACRV1P26436 265 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 IL12AP29459 219 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 DNAJA1P31689 397 aaKnown RBP7.47□□□□□ -1.21
ATXN3-249ENST00000564606 GGT5P36269 586 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 HNF4AP41235 474 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 AFF1P51825 1210 aaKnown RBP7.47□□□□□ -1.21
ATXN3-249ENST00000564606 FOXA1P55317 472 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 ERVPABLB-1P60509 514 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 OLR1P78380 273 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 TIAL1Q01085 375 aaKnown RBP eCLIP7.47□□□□□ -1.21
ATXN3-249ENST00000564606 GSTM4Q03013 218 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 TRAF2Q12933 501 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 NFATC3Q12968 1075 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 PMS2P3Q13401 168 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 NFATC2Q13469 925 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 VEZF1Q14119 521 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 BOP1Q14137 746 aaKnown RBP7.47□□□□□ -1.21
ATXN3-249ENST00000564606 TRIM16LQ309B1 348 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 TIMM50Q3ZCQ8 353 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 C4orf48Q5BLP8 95 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 PITRM1Q5JRX3 1037 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 PAGE3Q5JUK9 113 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 CLLU1OSQ5K130 101 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 CTSL3PQ5NE16 218 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 LIPJQ5W064 366 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 NADSYN1Q6IA69 706 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 NEK5Q6P3R8 708 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 KLHL35Q6PF15 583 aa7.47□□□□□ -1.21
ATXN3-249ENST00000564606 SHQ1Q6PI26 577 aaKnown RBP7.47□□□□□ -1.21
ATXN3-249ENST00000564606 DLEU7Q6UYE1 221 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms