RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 MRPL14Q6P1L8 145 aaKnown RBP18.03■□□□□ 0.48
NME3-204ENST00000563498 TLDC1Q6P9B6 456 aa18.03■□□□□ 0.48
NME3-204ENST00000563498 PPP1R32Q7Z5V6 425 aa18.03■□□□□ 0.48
NME3-204ENST00000563498 UBE2Q2Q8WVN8 375 aa18.03■□□□□ 0.48
NME3-204ENST00000563498 INPP5DQ92835 1189 aa18.03■□□□□ 0.48
NME3-204ENST00000563498 PPP1R2P1Q96PQ5 205 aa18.03■□□□□ 0.48
NME3-204ENST00000563498 ARNT2Q9HBZ2 717 aa18.03■□□□□ 0.48
NME3-204ENST00000563498 IFT80Q9P2H3 777 aaPredicted RBP18.03■□□□□ 0.48
NME3-204ENST00000563498 ICKQ9UPZ9 632 aa18.03■□□□□ 0.48
NME3-204ENST00000563498 FER1L5A0AVI2 2057 aa18.03■□□□□ 0.48
NME3-204ENST00000563498 H7C0C1 242 aa18.02■□□□□ 0.48
NME3-204ENST00000563498 H7C0S8 307 aa18.02■□□□□ 0.48
NME3-204ENST00000563498 ZSCAN9O15535 394 aaPredicted RBP18.02■□□□□ 0.48
NME3-204ENST00000563498 CBFA2T2O43439 604 aa18.02■□□□□ 0.48
NME3-204ENST00000563498 MFAP3LO75121 409 aa18.02■□□□□ 0.48
NME3-204ENST00000563498 UGT2B7P16662 529 aa18.02■□□□□ 0.48
NME3-204ENST00000563498 MC4RP32245 332 aa18.02■□□□□ 0.48
NME3-204ENST00000563498 ATP5OP48047 213 aa18.02■□□□□ 0.48
NME3-204ENST00000563498 TMPRSS15P98073 1019 aa18.02■□□□□ 0.48
NME3-204ENST00000563498 OLIG2Q13516 323 aa18.02■□□□□ 0.48
NME3-204ENST00000563498 ZIC1Q15915 447 aa18.02■□□□□ 0.48
NME3-204ENST00000563498 ANKRD20A2Q5SQ80 823 aa18.02■□□□□ 0.48
NME3-204ENST00000563498 ANKRD20A1Q5TYW2 823 aa18.02■□□□□ 0.48
NME3-204ENST00000563498 C1orf189Q5VU69 101 aa18.02■□□□□ 0.48
NME3-204ENST00000563498 ANKRD20A3Q5VUR7 823 aa18.02■□□□□ 0.48
NME3-204ENST00000563498 DENND5AQ6IQ26 1287 aa18.02■□□□□ 0.48
NME3-204ENST00000563498 ST6GALNAC3Q8NDV1 305 aa18.02■□□□□ 0.48
NME3-204ENST00000563498 OR2A14Q96R47 310 aa18.02■□□□□ 0.48
NME3-204ENST00000563498 SPRTNQ9H040 489 aaPredicted RBP18.02■□□□□ 0.48
NME3-204ENST00000563498 ATP13A2Q9NQ11 1180 aa18.02■□□□□ 0.48
NME3-204ENST00000563498 AGPAT4Q9NRZ5 378 aa18.02■□□□□ 0.48
NME3-204ENST00000563498 OR6C2Q9NZP2 312 aa18.02■□□□□ 0.48
NME3-204ENST00000563498 LRBAP50851 2863 aa18.01■□□□□ 0.47
NME3-204ENST00000563498 LIN7AO14910 233 aaPredicted RBP18.01■□□□□ 0.47
NME3-204ENST00000563498 HCRTR1O43613 425 aa18.01■□□□□ 0.47
NME3-204ENST00000563498 AP2A2O94973 939 aa18.01■□□□□ 0.47
NME3-204ENST00000563498 PSMB4P28070 264 aa18.01■□□□□ 0.47
NME3-204ENST00000563498 MARCKSL1P49006 195 aa18.01■□□□□ 0.47
NME3-204ENST00000563498 AIMP2Q13155 320 aaKnown RBP18.01■□□□□ 0.47
NME3-204ENST00000563498 CYP2A13Q16696 494 aa18.01■□□□□ 0.47
NME3-204ENST00000563498 DEFB110Q30KQ9 67 aa18.01■□□□□ 0.47
NME3-204ENST00000563498 NKAIN1Q4KMZ8 207 aa18.01■□□□□ 0.47
NME3-204ENST00000563498 UNC5AQ6ZN44 842 aa18.01■□□□□ 0.47
NME3-204ENST00000563498 CUZD1Q86UP6 607 aa18.01■□□□□ 0.47
NME3-204ENST00000563498 SERPINA9Q86WD7 417 aa18.01■□□□□ 0.47
NME3-204ENST00000563498 CDKL3Q8IVW4 592 aaPredicted RBP18.01■□□□□ 0.47
NME3-204ENST00000563498 SLC34A3Q8N130 599 aa18.01■□□□□ 0.47
NME3-204ENST00000563498 CLDN19Q8N6F1 224 aa18.01■□□□□ 0.47
NME3-204ENST00000563498 FLVCR1-AS1Q8TAF5 88 aa18.01■□□□□ 0.47
NME3-204ENST00000563498 HEMGNQ9BXL5 484 aa18.01■□□□□ 0.47
NME3-204ENST00000563498 GOLPH3Q9H4A6 298 aa18.01■□□□□ 0.47
NME3-204ENST00000563498 C10orf88Q9H8K7 445 aa18.01■□□□□ 0.47
NME3-204ENST00000563498 TXLNGQ9NUQ3 528 aa18.01■□□□□ 0.47
NME3-204ENST00000563498 POLG2Q9UHN1 485 aa18.01■□□□□ 0.47
NME3-204ENST00000563498 CDYLQ9Y232 598 aa18.01■□□□□ 0.47
NME3-204ENST00000563498 EFR3BQ9Y2G0 817 aa18.01■□□□□ 0.47
NME3-204ENST00000563498 NTNG1Q9Y2I2 539 aa18.01■□□□□ 0.47
NME3-204ENST00000563498 PCM1Q15154 2024 aa18.01■□□□□ 0.47
NME3-204ENST00000563498 ABCA12Q86UK0 2595 aa18■□□□□ 0.47
NME3-204ENST00000563498 A0A0J9YY10 115 aa18■□□□□ 0.47
NME3-204ENST00000563498 AGPSO00116 658 aa18■□□□□ 0.47
NME3-204ENST00000563498 CCL22O00626 93 aa18■□□□□ 0.47
NME3-204ENST00000563498 CNOT3O75175 753 aaKnown RBP18■□□□□ 0.47
NME3-204ENST00000563498 STK10O94804 968 aaKnown RBP18■□□□□ 0.47
NME3-204ENST00000563498 UMODP07911 640 aa18■□□□□ 0.47
NME3-204ENST00000563498 CHRM5P08912 532 aaPredicted RBP18■□□□□ 0.47
NME3-204ENST00000563498 GLRBP48167 497 aa18■□□□□ 0.47
NME3-204ENST00000563498 CDKN1CP49918 316 aaPredicted RBP18■□□□□ 0.47
NME3-204ENST00000563498 COPS2P61201 443 aa18■□□□□ 0.47
NME3-204ENST00000563498 CCDC181Q5TID7 509 aa18■□□□□ 0.47
NME3-204ENST00000563498 C11orf63Q6NUN7 778 aa18■□□□□ 0.47
NME3-204ENST00000563498 TRIM73Q86UV7 250 aa18■□□□□ 0.47
NME3-204ENST00000563498 VSTM4Q8IW00 320 aa18■□□□□ 0.47
NME3-204ENST00000563498 KLHDC8BQ8IXV7 354 aa18■□□□□ 0.47
NME3-204ENST00000563498 TBC1D21Q8IYX1 336 aa18■□□□□ 0.47
NME3-204ENST00000563498 ZNF655Q8N720 491 aaPredicted RBP18■□□□□ 0.47
NME3-204ENST00000563498 OR5AR1Q8NGP9 310 aa18■□□□□ 0.47
NME3-204ENST00000563498 ACTL9Q8TC94 416 aa18■□□□□ 0.47
NME3-204ENST00000563498 COG1Q8WTW3 980 aa18■□□□□ 0.47
NME3-204ENST00000563498 LRRC45Q96CN5 670 aa18■□□□□ 0.47
NME3-204ENST00000563498 SPATA13Q96N96 652 aa18■□□□□ 0.47
NME3-204ENST00000563498 TBL1YQ9BQ87 522 aa18■□□□□ 0.47
NME3-204ENST00000563498 WDR77Q9BQA1 342 aaPredicted RBP18■□□□□ 0.47
NME3-204ENST00000563498 DHCR7Q9UBM7 475 aaKnown RBP18■□□□□ 0.47
NME3-204ENST00000563498 PLCL2Q9UPR0 1127 aa18■□□□□ 0.47
NME3-204ENST00000563498 ASF1AQ9Y294 204 aa18■□□□□ 0.47
NME3-204ENST00000563498 POLEQ07864 2286 aa17.99■□□□□ 0.47
NME3-204ENST00000563498 QSOX1O00391 747 aa17.99■□□□□ 0.47
NME3-204ENST00000563498 ACADLP28330 430 aa17.99■□□□□ 0.47
NME3-204ENST00000563498 OTUD4Q01804 1114 aaKnown RBP17.99■□□□□ 0.47
NME3-204ENST00000563498 SLC5A12Q1EHB4 618 aa17.99■□□□□ 0.47
NME3-204ENST00000563498 TAS2R42Q7RTR8 314 aa17.99■□□□□ 0.47
NME3-204ENST00000563498 DNAJC22Q8N4W6 341 aa17.99■□□□□ 0.47
NME3-204ENST00000563498 PPP4R1Q8TF05 950 aa17.99■□□□□ 0.47
NME3-204ENST00000563498 DNAJC1Q96KC8 554 aaKnown RBP17.99■□□□□ 0.47
NME3-204ENST00000563498 NDC1Q9BTX1 674 aa17.99■□□□□ 0.47
NME3-204ENST00000563498 ZBTB20Q9HC78 741 aaPredicted RBP17.99■□□□□ 0.47
NME3-204ENST00000563498 NLE1Q9NVX2 485 aaPredicted RBP17.99■□□□□ 0.47
NME3-204ENST00000563498 SPHK1Q9NYA1 384 aa17.99■□□□□ 0.47
NME3-204ENST00000563498 KCNN4O15554 427 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms