RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 RABL3Q5HYI8 236 aa18.66■□□□□ 0.58
SMPD3-203ENST00000563226 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.66■□□□□ 0.58
SMPD3-203ENST00000563226 PRAMEF9Q5VWM5 478 aa18.66■□□□□ 0.58
SMPD3-203ENST00000563226 PRMT9Q6P2P2 845 aa18.66■□□□□ 0.58
SMPD3-203ENST00000563226 TRIM46Q7Z4K8 759 aa18.66■□□□□ 0.58
SMPD3-203ENST00000563226 RGL4Q8IZJ4 473 aa18.66■□□□□ 0.58
SMPD3-203ENST00000563226 CHCHD4Q8N4Q1 142 aa18.66■□□□□ 0.58
SMPD3-203ENST00000563226 DNAJB14Q8TBM8 379 aa18.66■□□□□ 0.58
SMPD3-203ENST00000563226 TMEM125Q96AQ2 219 aa18.66■□□□□ 0.58
SMPD3-203ENST00000563226 SLCO4A1Q96BD0 722 aa18.66■□□□□ 0.58
SMPD3-203ENST00000563226 PPP3R2Q96LZ3 170 aa18.66■□□□□ 0.58
SMPD3-203ENST00000563226 INTS7Q9NVH2 962 aaKnown RBP18.66■□□□□ 0.58
SMPD3-203ENST00000563226 CIDEBQ9UHD4 219 aa18.66■□□□□ 0.58
SMPD3-203ENST00000563226 LEF1Q9UJU2 399 aaPredicted RBP18.66■□□□□ 0.58
SMPD3-203ENST00000563226 HCN2Q9UL51 889 aa18.66■□□□□ 0.58
SMPD3-203ENST00000563226 MYO9BQ13459 2157 aa18.66■□□□□ 0.58
SMPD3-203ENST00000563226 SLC16A5O15375 505 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 RGS14O43566 566 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 PBLDP30039 288 aaPredicted RBP18.65■□□□□ 0.58
SMPD3-203ENST00000563226 OPRD1P41143 372 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 PRLHRP49683 370 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 GRM2Q14416 872 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 PTGR1Q14914 329 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 FBXL19Q6PCT2 694 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 NEK10Q6ZWH5 1172 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 NRSN1Q8IZ57 195 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 TCAIMQ8N3R3 496 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 TMIEQ8NEW7 156 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 PLA2G2FQ9BZM2 168 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 ZFP14Q9HCL3 533 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 SLC22A14Q9Y267 594 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 KCNE1BA0A087WTH5 132 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 TCRBV3S1A0A5B6 114 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 ARHGEF33A8MVX0 844 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 PSMD11O00231 422 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 SLC28A1O00337 649 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 AREL1O15033 823 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 LINC01565O15544 149 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 GSTM1P09488 218 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 IL12RB1P42701 662 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 DGKQP52824 942 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 RHDQ02161 417 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 GSTM4Q03013 218 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 FOXM1Q08050 763 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 PRKG2Q13237 762 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 BLMHQ13867 455 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 ELAVL3Q14576 367 aaKnown RBP18.65■□□□□ 0.58
SMPD3-203ENST00000563226 EIF4HQ15056 248 aaKnown RBP18.65■□□□□ 0.58
SMPD3-203ENST00000563226 CCSMST1Q4G0I0 132 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 SYTL3Q4VX76 610 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 RNF165Q6ZSG1 346 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 KIAA2013Q8IYS2 634 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 CHFRQ96EP1 664 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 SLC29A3Q9BZD2 475 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 TRPV4Q9HBA0 871 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 GDE1Q9NZC3 331 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 EGFL7Q9UHF1 273 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 DENND4AQ7Z401 1863 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 CEP290O15078 2479 aa18.65■□□□□ 0.58
SMPD3-203ENST00000563226 MMP20O60882 483 aa18.64■□□□□ 0.57
SMPD3-203ENST00000563226 RECQL5O94762 991 aaPredicted RBP18.64■□□□□ 0.57
SMPD3-203ENST00000563226 PDYNP01213 254 aa18.64■□□□□ 0.57
SMPD3-203ENST00000563226 C6P13671 934 aa18.64■□□□□ 0.57
SMPD3-203ENST00000563226 ADRB3P13945 408 aa18.64■□□□□ 0.57
SMPD3-203ENST00000563226 MAGEA10P43363 369 aaPredicted RBP18.64■□□□□ 0.57
SMPD3-203ENST00000563226 HNMTP50135 292 aa18.64■□□□□ 0.57
SMPD3-203ENST00000563226 TMEM220Q6QAJ8 160 aa18.64■□□□□ 0.57
SMPD3-203ENST00000563226 GPR149Q86SP6 731 aa18.64■□□□□ 0.57
SMPD3-203ENST00000563226 DHFR2Q86XF0 187 aa18.64■□□□□ 0.57
SMPD3-203ENST00000563226 FAM110BQ8TC76 370 aa18.64■□□□□ 0.57
SMPD3-203ENST00000563226 MCOLN3Q8TDD5 553 aa18.64■□□□□ 0.57
SMPD3-203ENST00000563226 LRGUKQ96M69 825 aa18.64■□□□□ 0.57
SMPD3-203ENST00000563226 TMEM74Q96NL1 305 aa18.64■□□□□ 0.57
SMPD3-203ENST00000563226 ACPTQ9BZG2 426 aa18.64■□□□□ 0.57
SMPD3-203ENST00000563226 VCX3BQ9H321 246 aa18.64■□□□□ 0.57
SMPD3-203ENST00000563226 GULP1Q9UBP9 304 aa18.64■□□□□ 0.57
SMPD3-203ENST00000563226 TBC1D3BA6NDS4 549 aa18.64■□□□□ 0.57
SMPD3-203ENST00000563226 H0Y858 1186 aa18.64■□□□□ 0.57
SMPD3-203ENST00000563226 ATG13O75143 517 aa18.64■□□□□ 0.57
SMPD3-203ENST00000563226 HSD17B1P14061 328 aa18.64■□□□□ 0.57
SMPD3-203ENST00000563226 NEK2P51955 445 aa18.64■□□□□ 0.57
SMPD3-203ENST00000563226 PFN3P60673 137 aa18.64■□□□□ 0.57
SMPD3-203ENST00000563226 PDGFRLQ15198 375 aa18.64■□□□□ 0.57
SMPD3-203ENST00000563226 IMPG1Q17R60 797 aa18.64■□□□□ 0.57
SMPD3-203ENST00000563226 IRGCQ6NXR0 463 aa18.64■□□□□ 0.57
SMPD3-203ENST00000563226 MMAAQ8IVH4 418 aaKnown RBP18.64■□□□□ 0.57
SMPD3-203ENST00000563226 TMEM102Q8N9M5 508 aaPredicted RBP18.64■□□□□ 0.57
SMPD3-203ENST00000563226 LRTM1Q9HBL6 345 aa18.64■□□□□ 0.57
SMPD3-203ENST00000563226 DTNAQ9Y4J8 743 aa18.64■□□□□ 0.57
SMPD3-203ENST00000563226 SLC5A10A0PJK1 596 aa18.63■□□□□ 0.57
SMPD3-203ENST00000563226 PABPN1LA6NDY0 278 aaKnown RBP18.63■□□□□ 0.57
SMPD3-203ENST00000563226 ZNF839A8K0R7 811 aa18.63■□□□□ 0.57
SMPD3-203ENST00000563226 PSIP1O75475 530 aaKnown RBP18.63■□□□□ 0.57
SMPD3-203ENST00000563226 JAK1P23458 1154 aa18.63■□□□□ 0.57
SMPD3-203ENST00000563226 PDHA2P29803 388 aa18.63■□□□□ 0.57
SMPD3-203ENST00000563226 GJA4P35212 333 aa18.63■□□□□ 0.57
SMPD3-203ENST00000563226 BDKRB1P46663 353 aa18.63■□□□□ 0.57
SMPD3-203ENST00000563226 GNPDA1P46926 289 aa18.63■□□□□ 0.57
SMPD3-203ENST00000563226 AP1S2P56377 157 aa18.63■□□□□ 0.57
SMPD3-203ENST00000563226 KLC1Q07866 573 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms