RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 ITFG1Q8TB96 612 aa20.85■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 SMG7Q92540 1137 aaKnown RBP20.85■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 DPY30Q9C005 99 aa20.85■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 DNAJC11Q9NVH1 559 aa20.85■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 AP4B1Q9Y6B7 739 aa20.85■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 ANKRD12Q6UB98 2062 aa20.85■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 PLXNA2O75051 1894 aa20.85■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 AKAP10O43572 662 aa20.85■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 SLCO2B1O94956 709 aa20.85■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 PRNPP04156 253 aa20.85■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 ELFN1P0C7U0 828 aa20.85■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 FCGR1AP12314 374 aa20.85■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 MAPK9P45984 424 aa20.85■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 CREB5Q02930 508 aa20.85■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 SERPINA13PQ6UXR4 307 aa20.85■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 VRK3Q8IV63 474 aa20.85■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 RGL4Q8IZJ4 473 aa20.85■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 FBXL8Q96CD0 374 aa20.85■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 FARSBQ9NSD9 589 aaKnown RBP20.85■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 MBD1Q9UIS9 605 aaPredicted RBP20.85■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 PER2O15055 1255 aa20.84■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 MTX2O75431 263 aa20.84■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 KCNH1O95259 989 aa20.84■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 IL6P05231 212 aa20.84■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 ZNF26P17031 533 aaPredicted RBP20.84■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 EPORP19235 508 aa20.84■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 MAP4P27816 1152 aaKnown RBP20.84■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 SYTL3Q4VX76 610 aa20.84■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 UGT2A3Q6UWM9 527 aa20.84■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 DLEU7Q6UYE1 221 aa20.84■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 UBE2Q1Q7Z7E8 422 aa20.84■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 RASGRP3Q8IV61 690 aa20.84■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 LIX1Q8N485 282 aa20.84■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 L3MBTL4Q8NA19 623 aa20.84■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 GLYATL1Q969I3 302 aa20.84■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 FAM192AQ9GZU8 254 aa20.84■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 SEMA6AQ9H2E6 1030 aa20.84■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 ELOVL6Q9H5J4 265 aa20.84■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 INTS7Q9NVH2 962 aaKnown RBP20.84■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 PIKFYVEQ9Y2I7 2098 aa20.84■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 FADS2P1A8MWK0 482 aa20.83■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 SGTAO43765 313 aa20.83■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 NFATC1O95644 943 aa20.83■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 GSTM1P09488 218 aa20.83■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 HMGCS1Q01581 520 aa20.83■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 GSTM4Q03013 218 aa20.83■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 KIAA0040Q15053 153 aa20.83■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 ACOX1Q15067 660 aa20.83■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 FXNQ16595 210 aa20.83■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 CPSF6Q16630 551 aaKnown RBP eCLIP20.83■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 PTCHD3Q3KNS1 767 aa20.83■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 LIPIQ6XZB0 460 aa20.83■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 IFNEQ86WN2 208 aa20.83■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 OR8J3Q8NGG0 315 aa20.83■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 SLC13A3Q8WWT9 602 aa20.83■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 SELENOMQ8WWX9 145 aa20.83■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 SAMD11Q96NU1 681 aa20.83■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 LRRC3BQ96PB8 259 aa20.83■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 GBP5Q96PP8 586 aa20.83■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 CGREF1Q99674 301 aa20.83■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 P2RY13Q9BPV8 354 aa20.83■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 MTG2Q9H4K7 406 aa20.83■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 COQ10BQ9H8M1 238 aa20.83■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 ZNHIT2Q9UHR6 403 aa20.83■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 AURKCQ9UQB9 309 aa20.83■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 AP3M1Q9Y2T2 418 aa20.83■□□□□ 0.93
VPS9D1-AS1-202ENST00000562866 WNT9AO14904 365 aa20.82■□□□□ 0.92
VPS9D1-AS1-202ENST00000562866 ATG13O75143 517 aa20.82■□□□□ 0.92
VPS9D1-AS1-202ENST00000562866 TULP3O75386 442 aa20.82■□□□□ 0.92
VPS9D1-AS1-202ENST00000562866 TIPRLO75663 272 aa20.82■□□□□ 0.92
VPS9D1-AS1-202ENST00000562866 RSL1D1O76021 490 aaKnown RBP20.82■□□□□ 0.92
VPS9D1-AS1-202ENST00000562866 PRPH2P23942 346 aa20.82■□□□□ 0.92
VPS9D1-AS1-202ENST00000562866 MAPK1P28482 360 aa20.82■□□□□ 0.92
VPS9D1-AS1-202ENST00000562866 MTX3Q5HYI7 312 aa20.82■□□□□ 0.92
VPS9D1-AS1-202ENST00000562866 HMBOX1Q6NT76 420 aa20.82■□□□□ 0.92
VPS9D1-AS1-202ENST00000562866 AADATQ8N5Z0 425 aa20.82■□□□□ 0.92
VPS9D1-AS1-202ENST00000562866 PACRGLQ8N7B6 248 aa20.82■□□□□ 0.92
VPS9D1-AS1-202ENST00000562866 DNAJB8Q8NHS0 232 aa20.82■□□□□ 0.92
VPS9D1-AS1-202ENST00000562866 ATL1Q8WXF7 558 aa20.82■□□□□ 0.92
VPS9D1-AS1-202ENST00000562866 GLMNQ92990 594 aa20.82■□□□□ 0.92
VPS9D1-AS1-202ENST00000562866 AP2M1Q96CW1 435 aa20.82■□□□□ 0.92
VPS9D1-AS1-202ENST00000562866 ZNF597Q96LX8 424 aa20.82■□□□□ 0.92
VPS9D1-AS1-202ENST00000562866 OSBPL11Q9BXB4 747 aa20.82■□□□□ 0.92
VPS9D1-AS1-202ENST00000562866 SLAMF8Q9P0V8 285 aa20.82■□□□□ 0.92
VPS9D1-AS1-202ENST00000562866 MAGEL2Q9UJ55 1249 aa20.82■□□□□ 0.92
VPS9D1-AS1-202ENST00000562866 PCDHB3Q9Y5E6 796 aa20.82■□□□□ 0.92
VPS9D1-AS1-202ENST00000562866 NUP210Q8TEM1 1887 aaPredicted RBP20.82■□□□□ 0.92
VPS9D1-AS1-202ENST00000562866 KCNE1BA0A087WTH5 132 aa20.82■□□□□ 0.92
VPS9D1-AS1-202ENST00000562866 SERTM1A2A2V5 107 aa20.82■□□□□ 0.92
VPS9D1-AS1-202ENST00000562866 H0Y858 1186 aa20.82■□□□□ 0.92
VPS9D1-AS1-202ENST00000562866 KPNA3O00505 521 aaPredicted RBP20.82■□□□□ 0.92
VPS9D1-AS1-202ENST00000562866 PDYNP01213 254 aa20.82■□□□□ 0.92
VPS9D1-AS1-202ENST00000562866 FASP25445 335 aa20.82■□□□□ 0.92
VPS9D1-AS1-202ENST00000562866 DGKQP52824 942 aa20.82■□□□□ 0.92
VPS9D1-AS1-202ENST00000562866 ZNF33BQ06732 778 aa20.82■□□□□ 0.92
VPS9D1-AS1-202ENST00000562866 MAP7Q14244 749 aa20.82■□□□□ 0.92
VPS9D1-AS1-202ENST00000562866 TCEAL5Q5H9L2 206 aa20.82■□□□□ 0.92
VPS9D1-AS1-202ENST00000562866 PARS2Q7L3T8 475 aaKnown RBP20.82■□□□□ 0.92
VPS9D1-AS1-202ENST00000562866 AMIGO2Q86SJ2 522 aa20.82■□□□□ 0.92
VPS9D1-AS1-202ENST00000562866 ADGRG5Q8IZF4 528 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms