RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 POU6F1Q14863 301 aa12.55□□□□□ -0.4
SF3B3-202ENST00000562722 DENND5AQ6IQ26 1287 aa12.55□□□□□ -0.4
SF3B3-202ENST00000562722 UNC5AQ6ZN44 842 aa12.55□□□□□ -0.4
SF3B3-202ENST00000562722 TMTC1Q8IUR5 882 aa12.55□□□□□ -0.4
SF3B3-202ENST00000562722 CISD2Q8N5K1 135 aaKnown RBP12.55□□□□□ -0.4
SF3B3-202ENST00000562722 TM9SF4Q92544 642 aa12.55□□□□□ -0.4
SF3B3-202ENST00000562722 C19orf43Q9BQ61 176 aa12.55□□□□□ -0.4
SF3B3-202ENST00000562722 SPRTNQ9H040 489 aaPredicted RBP12.55□□□□□ -0.4
SF3B3-202ENST00000562722 FAM60AQ9NP50 221 aa12.55□□□□□ -0.4
SF3B3-202ENST00000562722 C5AR2Q9P296 337 aa12.55□□□□□ -0.4
SF3B3-202ENST00000562722 PCDHA3Q9Y5H8 950 aa12.55□□□□□ -0.4
SF3B3-202ENST00000562722 SPTAN1Q13813 2472 aaKnown RBP12.55□□□□□ -0.4
SF3B3-202ENST00000562722 TRBV5-4A0A0C4DH59 114 aa12.54□□□□□ -0.4
SF3B3-202ENST00000562722 A0A0J9YY10 115 aa12.54□□□□□ -0.4
SF3B3-202ENST00000562722 CCDC78A2IDD5 438 aa12.54□□□□□ -0.4
SF3B3-202ENST00000562722 LIN7AO14910 233 aaPredicted RBP12.54□□□□□ -0.4
SF3B3-202ENST00000562722 ZSCAN9O15535 394 aaPredicted RBP12.54□□□□□ -0.4
SF3B3-202ENST00000562722 KLHL41O60662 606 aa12.54□□□□□ -0.4
SF3B3-202ENST00000562722 AP2A2O94973 939 aa12.54□□□□□ -0.4
SF3B3-202ENST00000562722 TJP3O95049 919 aa12.54□□□□□ -0.4
SF3B3-202ENST00000562722 IGHEP01854 428 aa12.54□□□□□ -0.4
SF3B3-202ENST00000562722 FTH1P02794 183 aa12.54□□□□□ -0.4
SF3B3-202ENST00000562722 CHRM5P08912 532 aaPredicted RBP12.54□□□□□ -0.4
SF3B3-202ENST00000562722 CD63P08962 238 aa12.54□□□□□ -0.4
SF3B3-202ENST00000562722 CYLC1P35663 651 aaPredicted RBP12.54□□□□□ -0.4
SF3B3-202ENST00000562722 NSG1P42857 185 aa12.54□□□□□ -0.4
SF3B3-202ENST00000562722 RWDD2BP57060 319 aa12.54□□□□□ -0.4
SF3B3-202ENST00000562722 MSLNQ13421 630 aaPredicted RBP12.54□□□□□ -0.4
SF3B3-202ENST00000562722 ELOAQ14241 798 aaKnown RBP12.54□□□□□ -0.4
SF3B3-202ENST00000562722 DBN1Q16643 649 aa12.54□□□□□ -0.4
SF3B3-202ENST00000562722 CYP2A13Q16696 494 aa12.54□□□□□ -0.4
SF3B3-202ENST00000562722 PLEKHN1Q494U1 663 aaPredicted RBP12.54□□□□□ -0.4
SF3B3-202ENST00000562722 CCDC170Q8IYT3 715 aa12.54□□□□□ -0.4
SF3B3-202ENST00000562722 GALNT16Q8N428 558 aa12.54□□□□□ -0.4
SF3B3-202ENST00000562722 ZNF655Q8N720 491 aaPredicted RBP12.54□□□□□ -0.4
SF3B3-202ENST00000562722 PROKR1Q8TCW9 393 aa12.54□□□□□ -0.4
SF3B3-202ENST00000562722 SNRNP40Q96DI7 357 aaKnown RBP12.54□□□□□ -0.4
SF3B3-202ENST00000562722 NDC1Q9BTX1 674 aa12.54□□□□□ -0.4
SF3B3-202ENST00000562722 AP1M1Q9BXS5 423 aa12.54□□□□□ -0.4
SF3B3-202ENST00000562722 ARNT2Q9HBZ2 717 aa12.54□□□□□ -0.4
SF3B3-202ENST00000562722 NLE1Q9NVX2 485 aaPredicted RBP12.54□□□□□ -0.4
SF3B3-202ENST00000562722 PIH1D1Q9NWS0 290 aaKnown RBP12.54□□□□□ -0.4
SF3B3-202ENST00000562722 DHCR7Q9UBM7 475 aaKnown RBP12.54□□□□□ -0.4
SF3B3-202ENST00000562722 POLG2Q9UHN1 485 aa12.54□□□□□ -0.4
SF3B3-202ENST00000562722 PLAGL1Q9UM63 463 aa12.54□□□□□ -0.4
SF3B3-202ENST00000562722 SRPK3Q9UPE1 567 aa12.54□□□□□ -0.4
SF3B3-202ENST00000562722 CDYLQ9Y232 598 aa12.54□□□□□ -0.4
SF3B3-202ENST00000562722 B3GNT3Q9Y2A9 372 aa12.54□□□□□ -0.4
SF3B3-202ENST00000562722 EFR3BQ9Y2G0 817 aa12.54□□□□□ -0.4
SF3B3-202ENST00000562722 SPTBN1Q01082 2364 aaKnown RBP12.54□□□□□ -0.4
SF3B3-202ENST00000562722 ISM1B1AKI9 464 aa12.53□□□□□ -0.4
SF3B3-202ENST00000562722 H7C0S8 307 aa12.53□□□□□ -0.4
SF3B3-202ENST00000562722 QSOX1O00391 747 aa12.53□□□□□ -0.4
SF3B3-202ENST00000562722 KDM1AO60341 852 aa12.53□□□□□ -0.4
SF3B3-202ENST00000562722 ZNF189O75820 626 aaPredicted RBP12.53□□□□□ -0.4
SF3B3-202ENST00000562722 KLF7O75840 302 aaPredicted RBP12.53□□□□□ -0.4
SF3B3-202ENST00000562722 IPO13O94829 963 aaKnown RBP12.53□□□□□ -0.4
SF3B3-202ENST00000562722 IPO7O95373 1038 aaKnown RBP12.53□□□□□ -0.4
SF3B3-202ENST00000562722 PTPN7P35236 360 aa12.53□□□□□ -0.4
SF3B3-202ENST00000562722 CSE1LP55060 971 aaKnown RBP12.53□□□□□ -0.4
SF3B3-202ENST00000562722 TBX2Q13207 712 aaPredicted RBP12.53□□□□□ -0.4
SF3B3-202ENST00000562722 MYBPC3Q14896 1274 aa12.53□□□□□ -0.4
SF3B3-202ENST00000562722 ZIC1Q15915 447 aa12.53□□□□□ -0.4
SF3B3-202ENST00000562722 ZNF658BQ4V348 819 aaPredicted RBP12.53□□□□□ -0.4
SF3B3-202ENST00000562722 DCAF10Q5QP82 559 aa12.53□□□□□ -0.4
SF3B3-202ENST00000562722 ZNF385CQ66K41 422 aaPredicted RBP12.53□□□□□ -0.4
SF3B3-202ENST00000562722 RHBDD2Q6NTF9 364 aa12.53□□□□□ -0.4
SF3B3-202ENST00000562722 AADACL2Q6P093 401 aa12.53□□□□□ -0.4
SF3B3-202ENST00000562722 NAPRTQ6XQN6 538 aa12.53□□□□□ -0.4
SF3B3-202ENST00000562722 PIANPQ8IYJ0 282 aa12.53□□□□□ -0.4
SF3B3-202ENST00000562722 ZADH2Q8N4Q0 377 aa12.53□□□□□ -0.4
SF3B3-202ENST00000562722 TAB3Q8N5C8 712 aaPredicted RBP12.53□□□□□ -0.4
SF3B3-202ENST00000562722 FAM71DQ8N9W8 422 aa12.53□□□□□ -0.4
SF3B3-202ENST00000562722 OR2Y1Q8NGV0 311 aa12.53□□□□□ -0.4
SF3B3-202ENST00000562722 CDKN2AIPNLQ96HQ2 116 aa12.53□□□□□ -0.4
SF3B3-202ENST00000562722 GBP5Q96PP8 586 aa12.53□□□□□ -0.4
SF3B3-202ENST00000562722 OR2A14Q96R47 310 aa12.53□□□□□ -0.4
SF3B3-202ENST00000562722 LRRC40Q9H9A6 602 aa12.53□□□□□ -0.4
SF3B3-202ENST00000562722 ASF1BQ9NVP2 202 aa12.53□□□□□ -0.4
SF3B3-202ENST00000562722 P4HTMQ9NXG6 502 aa12.53□□□□□ -0.4
SF3B3-202ENST00000562722 SPHK1Q9NYA1 384 aa12.53□□□□□ -0.4
SF3B3-202ENST00000562722 OR6C2Q9NZP2 312 aa12.53□□□□□ -0.4
SF3B3-202ENST00000562722 PRSS21Q9Y6M0 314 aa12.53□□□□□ -0.4
SF3B3-202ENST00000562722 RP1L1Q8IWN7 2480 aaPredicted RBP12.53□□□□□ -0.4
SF3B3-202ENST00000562722 MED13Q9UHV7 2174 aa12.53□□□□□ -0.4
SF3B3-202ENST00000562722 ICE1Q9Y2F5 2266 aa12.53□□□□□ -0.4
SF3B3-202ENST00000562722 GOLGA6L9A6NEM1 432 aa12.52□□□□□ -0.41
SF3B3-202ENST00000562722 MASP2O00187 686 aa12.52□□□□□ -0.41
SF3B3-202ENST00000562722 HCRTR1O43613 425 aa12.52□□□□□ -0.41
SF3B3-202ENST00000562722 CTSBP07858 339 aa12.52□□□□□ -0.41
SF3B3-202ENST00000562722 OR56A5P0C7T3 313 aa12.52□□□□□ -0.41
SF3B3-202ENST00000562722 ALAS2P22557 587 aa12.52□□□□□ -0.41
SF3B3-202ENST00000562722 ITGA3P26006 1051 aa12.52□□□□□ -0.41
SF3B3-202ENST00000562722 MSNP26038 577 aaKnown RBP12.52□□□□□ -0.41
SF3B3-202ENST00000562722 FOXL2P58012 376 aa12.52□□□□□ -0.41
SF3B3-202ENST00000562722 PARP6Q2NL67 630 aa12.52□□□□□ -0.41
SF3B3-202ENST00000562722 SKOR2Q2VWA4 1001 aaPredicted RBP12.52□□□□□ -0.41
SF3B3-202ENST00000562722 NKAIN1Q4KMZ8 207 aa12.52□□□□□ -0.41
SF3B3-202ENST00000562722 TLDC1Q6P9B6 456 aa12.52□□□□□ -0.41
SF3B3-202ENST00000562722 MAMDC2Q7Z304 686 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms