RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 ZFP14Q9HCL3 533 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 CCDC177Q9NQR7 707 aaPredicted RBP16.17■□□□□ 0.18
TPM1-228ENST00000560975 ABCG2Q9UNQ0 655 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 WBP11Q9Y2W2 641 aaKnown RBP16.17■□□□□ 0.18
TPM1-228ENST00000560975 MED26O95402 600 aa16.16■□□□□ 0.18
TPM1-228ENST00000560975 BMP1P13497 986 aa16.16■□□□□ 0.18
TPM1-228ENST00000560975 SUOXP51687 545 aa16.16■□□□□ 0.18
TPM1-228ENST00000560975 TUBA1BP68363 451 aa16.16■□□□□ 0.18
TPM1-228ENST00000560975 MVKQ03426 396 aa16.16■□□□□ 0.18
TPM1-228ENST00000560975 BCL7AQ4VC05 210 aa16.16■□□□□ 0.18
TPM1-228ENST00000560975 CAPN13Q6MZZ7 669 aaPredicted RBP16.16■□□□□ 0.18
TPM1-228ENST00000560975 TUBA1AQ71U36 451 aa16.16■□□□□ 0.18
TPM1-228ENST00000560975 GALNT10Q86SR1 603 aa16.16■□□□□ 0.18
TPM1-228ENST00000560975 KRTCAP2Q8N6L1 136 aa16.16■□□□□ 0.18
TPM1-228ENST00000560975 HMCESQ96FZ2 354 aa16.16■□□□□ 0.18
TPM1-228ENST00000560975 SARS2Q9NP81 518 aaKnown RBP16.16■□□□□ 0.18
TPM1-228ENST00000560975 HEBP1Q9NRV9 189 aa16.16■□□□□ 0.18
TPM1-228ENST00000560975 PAQR5Q9NXK6 330 aaPredicted RBP16.16■□□□□ 0.18
TPM1-228ENST00000560975 TAS2R13Q9NYV9 303 aa16.16■□□□□ 0.18
TPM1-228ENST00000560975 DICER1Q9UPY3 1922 aaKnown RBP16.16■□□□□ 0.18
TPM1-228ENST00000560975 E9PAM4 449 aa16.16■□□□□ 0.18
TPM1-228ENST00000560975 hCG_2039718K7EN88 272 aa16.16■□□□□ 0.18
TPM1-228ENST00000560975 M0R082 166 aa16.16■□□□□ 0.18
TPM1-228ENST00000560975 ANKRD28O15084 1053 aa16.16■□□□□ 0.18
TPM1-228ENST00000560975 FGF10O15520 208 aaPredicted RBP16.16■□□□□ 0.18
TPM1-228ENST00000560975 CTSKP43235 329 aa16.16■□□□□ 0.18
TPM1-228ENST00000560975 HTR3AP46098 478 aa16.16■□□□□ 0.18
TPM1-228ENST00000560975 PGFP49763 221 aa16.16■□□□□ 0.18
TPM1-228ENST00000560975 CREMQ03060 361 aa16.16■□□□□ 0.18
TPM1-228ENST00000560975 ZC3H12BQ5HYM0 836 aaKnown RBP16.16■□□□□ 0.18
TPM1-228ENST00000560975 ZNF544Q6NX49 715 aa16.16■□□□□ 0.18
TPM1-228ENST00000560975 TSPAN18Q96SJ8 248 aa16.16■□□□□ 0.18
TPM1-228ENST00000560975 C16orf70Q9BSU1 422 aa16.16■□□□□ 0.18
TPM1-228ENST00000560975 OR51E2Q9H255 320 aa16.16■□□□□ 0.18
TPM1-228ENST00000560975 MED16Q9Y2X0 877 aa16.16■□□□□ 0.18
TPM1-228ENST00000560975 PEX11BO96011 259 aa16.16■□□□□ 0.18
TPM1-228ENST00000560975 ATXN1LP0C7T5 689 aaKnown RBP16.16■□□□□ 0.18
TPM1-228ENST00000560975 POLR2EP19388 210 aaKnown RBP16.16■□□□□ 0.18
TPM1-228ENST00000560975 AKT1P31749 480 aa16.16■□□□□ 0.18
TPM1-228ENST00000560975 RENBPP51606 427 aa16.16■□□□□ 0.18
TPM1-228ENST00000560975 ZNF45Q02386 682 aa16.16■□□□□ 0.18
TPM1-228ENST00000560975 ABRAXAS2Q15018 415 aa16.16■□□□□ 0.18
TPM1-228ENST00000560975 SHQ1Q6PI26 577 aaKnown RBP16.16■□□□□ 0.18
TPM1-228ENST00000560975 CCDC71Q8IV32 467 aaPredicted RBP16.16■□□□□ 0.18
TPM1-228ENST00000560975 OR8H2Q8N162 312 aa16.16■□□□□ 0.18
TPM1-228ENST00000560975 SIDT2Q8NBJ9 832 aaKnown RBP16.16■□□□□ 0.18
TPM1-228ENST00000560975 FAM120BQ96EK7 910 aaKnown RBP16.16■□□□□ 0.18
TPM1-228ENST00000560975 NEDD4LQ96PU5 975 aa16.16■□□□□ 0.18
TPM1-228ENST00000560975 ZBTB18Q99592 522 aa16.16■□□□□ 0.18
TPM1-228ENST00000560975 SP110Q9HB58 689 aa16.16■□□□□ 0.18
TPM1-228ENST00000560975 PDP1Q9P0J1 537 aaPredicted RBP16.16■□□□□ 0.18
TPM1-228ENST00000560975 KIF17Q9P2E2 1029 aa16.16■□□□□ 0.18
TPM1-228ENST00000560975 CARD8Q9Y2G2 431 aa16.16■□□□□ 0.18
TPM1-228ENST00000560975 SNX8Q9Y5X2 465 aa16.16■□□□□ 0.18
TPM1-228ENST00000560975 PDCD11Q14690 1871 aaKnown RBP16.15■□□□□ 0.18
TPM1-228ENST00000560975 TSPAN3O60637 253 aa16.15■□□□□ 0.18
TPM1-228ENST00000560975 CYP7B1O75881 506 aa16.15■□□□□ 0.18
TPM1-228ENST00000560975 DPEP1P16444 411 aa16.15■□□□□ 0.18
TPM1-228ENST00000560975 PPP3CCP48454 512 aa16.15■□□□□ 0.18
TPM1-228ENST00000560975 STC1P52823 247 aa16.15■□□□□ 0.18
TPM1-228ENST00000560975 CYP4F2P78329 520 aa16.15■□□□□ 0.18
TPM1-228ENST00000560975 CDK10Q15131 360 aa16.15■□□□□ 0.18
TPM1-228ENST00000560975 TIGD6Q17RP2 521 aa16.15■□□□□ 0.18
TPM1-228ENST00000560975 Q6ZPB1 254 aaPredicted RBP16.15■□□□□ 0.18
TPM1-228ENST00000560975 GPR149Q86SP6 731 aa16.15■□□□□ 0.18
TPM1-228ENST00000560975 TCAIMQ8N3R3 496 aa16.15■□□□□ 0.18
TPM1-228ENST00000560975 RTL3Q8N8U3 475 aaKnown RBP16.15■□□□□ 0.18
TPM1-228ENST00000560975 DNASE1L2Q92874 299 aa16.15■□□□□ 0.18
TPM1-228ENST00000560975 PSMG2Q969U7 264 aa16.15■□□□□ 0.18
TPM1-228ENST00000560975 PYURFQ96I23 114 aa16.15■□□□□ 0.18
TPM1-228ENST00000560975 CHCHD6Q9BRQ6 235 aa16.15■□□□□ 0.18
TPM1-228ENST00000560975 LCHNA4D1U4 455 aa16.15■□□□□ 0.18
TPM1-228ENST00000560975 E2F3O00716 465 aa16.15■□□□□ 0.18
TPM1-228ENST00000560975 FFAR3O14843 346 aa16.15■□□□□ 0.18
TPM1-228ENST00000560975 GPR42O15529 346 aa16.15■□□□□ 0.18
TPM1-228ENST00000560975 IRAK2O43187 625 aa16.15■□□□□ 0.18
TPM1-228ENST00000560975 CDKN1CP49918 316 aaPredicted RBP16.15■□□□□ 0.18
TPM1-228ENST00000560975 CACNB2Q08289 660 aaPredicted RBP16.15■□□□□ 0.18
TPM1-228ENST00000560975 SGO1Q5FBB7 561 aa16.15■□□□□ 0.18
TPM1-228ENST00000560975 NRARPQ7Z6K4 114 aa16.15■□□□□ 0.18
TPM1-228ENST00000560975 GPSM1Q86YR5 675 aa16.15■□□□□ 0.18
TPM1-228ENST00000560975 ATG16L2Q8NAA4 619 aa16.15■□□□□ 0.18
TPM1-228ENST00000560975 PDLIM5Q96HC4 596 aaKnown RBP16.15■□□□□ 0.18
TPM1-228ENST00000560975 SNX18Q96RF0 628 aa16.15■□□□□ 0.18
TPM1-228ENST00000560975 COPS4Q9BT78 406 aa16.15■□□□□ 0.18
TPM1-228ENST00000560975 CCNB1IP1Q9NPC3 277 aa16.15■□□□□ 0.18
TPM1-228ENST00000560975 KCNH4Q9UQ05 1017 aa16.15■□□□□ 0.18
TPM1-228ENST00000560975 COMMD10Q9Y6G5 202 aa16.15■□□□□ 0.18
TPM1-228ENST00000560975 ZSWIM8A7E2V4 1837 aa16.15■□□□□ 0.18
TPM1-228ENST00000560975 A0A0U1RQS6 177 aa16.14■□□□□ 0.17
TPM1-228ENST00000560975 GRXCR2A6NFK2 248 aa16.14■□□□□ 0.17
TPM1-228ENST00000560975 TBKBP1A7MCY6 615 aa16.14■□□□□ 0.17
TPM1-228ENST00000560975 AREL1O15033 823 aa16.14■□□□□ 0.17
TPM1-228ENST00000560975 PCDHGA12O60330 932 aa16.14■□□□□ 0.17
TPM1-228ENST00000560975 WBP4O75554 376 aaKnown RBP16.14■□□□□ 0.17
TPM1-228ENST00000560975 RPP40O75818 363 aaKnown RBP16.14■□□□□ 0.17
TPM1-228ENST00000560975 ALX3O95076 343 aa16.14■□□□□ 0.17
TPM1-228ENST00000560975 CXCR4P61073 352 aa16.14■□□□□ 0.17
TPM1-228ENST00000560975 TP53BP2Q13625 1128 aa16.14■□□□□ 0.17
TPM1-228ENST00000560975 KIAA0040Q15053 153 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms