RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 ZNF534Q76KX8 674 aa9.89□□□□□ -0.83
LDLR-214ENST00000560628 FAM20CQ8IXL6 584 aa9.89□□□□□ -0.83
LDLR-214ENST00000560628 TBC1D21Q8IYX1 336 aa9.89□□□□□ -0.83
LDLR-214ENST00000560628 C2orf73Q8N5S3 287 aaPredicted RBP9.89□□□□□ -0.83
LDLR-214ENST00000560628 ENDOVQ8N8Q3 282 aaKnown RBP9.89□□□□□ -0.83
LDLR-214ENST00000560628 LMNTD1Q8N9Z9 388 aa9.89□□□□□ -0.83
LDLR-214ENST00000560628 CFAP61Q8NHU2 1237 aa9.89□□□□□ -0.83
LDLR-214ENST00000560628 THAP4Q8WY91 577 aa9.89□□□□□ -0.83
LDLR-214ENST00000560628 N4BP2L2Q92802 583 aaPredicted RBP9.89□□□□□ -0.83
LDLR-214ENST00000560628 LRFN5Q96NI6 719 aa9.89□□□□□ -0.83
LDLR-214ENST00000560628 OR2A14Q96R47 310 aa9.89□□□□□ -0.83
LDLR-214ENST00000560628 TTC1Q99614 292 aa9.89□□□□□ -0.83
LDLR-214ENST00000560628 SPRTNQ9H040 489 aaPredicted RBP9.89□□□□□ -0.83
LDLR-214ENST00000560628 SYTL2Q9HCH5 934 aa9.89□□□□□ -0.83
LDLR-214ENST00000560628 LZTFL1Q9NQ48 299 aa9.89□□□□□ -0.83
LDLR-214ENST00000560628 CHRAC1Q9NRG0 131 aa9.89□□□□□ -0.83
LDLR-214ENST00000560628 PCMTD2Q9NV79 361 aa9.89□□□□□ -0.83
LDLR-214ENST00000560628 CIDEBQ9UHD4 219 aa9.89□□□□□ -0.83
LDLR-214ENST00000560628 POLG2Q9UHN1 485 aa9.89□□□□□ -0.83
LDLR-214ENST00000560628 PLAAQ9Y263 795 aa9.89□□□□□ -0.83
LDLR-214ENST00000560628 TCAF1Q9Y4C2 921 aa9.89□□□□□ -0.83
LDLR-214ENST00000560628 FLNBO75369 2602 aaKnown RBP9.89□□□□□ -0.83
LDLR-214ENST00000560628 ISM1B1AKI9 464 aa9.88□□□□□ -0.83
LDLR-214ENST00000560628 E7EQ34 232 aa9.88□□□□□ -0.83
LDLR-214ENST00000560628 HCRTR1O43613 425 aa9.88□□□□□ -0.83
LDLR-214ENST00000560628 CAPN1P07384 714 aa9.88□□□□□ -0.83
LDLR-214ENST00000560628 CTSBP07858 339 aa9.88□□□□□ -0.83
LDLR-214ENST00000560628 RORAP35398 523 aa9.88□□□□□ -0.83
LDLR-214ENST00000560628 PTGIRP43119 386 aa9.88□□□□□ -0.83
LDLR-214ENST00000560628 KCNJ1P48048 391 aa9.88□□□□□ -0.83
LDLR-214ENST00000560628 TERF1P54274 439 aa9.88□□□□□ -0.83
LDLR-214ENST00000560628 MLLT10P55197 1068 aa9.88□□□□□ -0.83
LDLR-214ENST00000560628 FOXK1P85037 733 aa9.88□□□□□ -0.83
LDLR-214ENST00000560628 HSPA14Q0VDF9 509 aa9.88□□□□□ -0.83
LDLR-214ENST00000560628 SIX1Q15475 284 aaPredicted RBP9.88□□□□□ -0.83
LDLR-214ENST00000560628 CCNG2Q16589 344 aa9.88□□□□□ -0.83
LDLR-214ENST00000560628 DEFB110Q30KQ9 67 aa9.88□□□□□ -0.83
LDLR-214ENST00000560628 C1orf189Q5VU69 101 aa9.88□□□□□ -0.83
LDLR-214ENST00000560628 VRK3Q8IV63 474 aa9.88□□□□□ -0.83
LDLR-214ENST00000560628 APLFQ8IW19 511 aaPredicted RBP9.88□□□□□ -0.83
LDLR-214ENST00000560628 SYTL1Q8IYJ3 562 aa9.88□□□□□ -0.83
LDLR-214ENST00000560628 KRT222Q8N1A0 295 aa9.88□□□□□ -0.83
LDLR-214ENST00000560628 C19orf47Q8N9M1 422 aaKnown RBP9.88□□□□□ -0.83
LDLR-214ENST00000560628 PPHLN1Q8NEY8 458 aaKnown RBP9.88□□□□□ -0.83
LDLR-214ENST00000560628 OR5K2Q8NHB8 316 aa9.88□□□□□ -0.83
LDLR-214ENST00000560628 LKAAEAR1Q8TD35 194 aa9.88□□□□□ -0.83
LDLR-214ENST00000560628 SEC14L1Q92503 715 aa9.88□□□□□ -0.83
LDLR-214ENST00000560628 RANBP9Q96S59 729 aa9.88□□□□□ -0.83
LDLR-214ENST00000560628 NLNQ9BYT8 704 aa9.88□□□□□ -0.83
LDLR-214ENST00000560628 ING2Q9H160 280 aa9.88□□□□□ -0.83
LDLR-214ENST00000560628 ACSS2Q9NR19 701 aa9.88□□□□□ -0.83
LDLR-214ENST00000560628 PAK5Q9P286 719 aa9.88□□□□□ -0.83
LDLR-214ENST00000560628 MARCH4Q9P2E8 410 aaPredicted RBP9.88□□□□□ -0.83
LDLR-214ENST00000560628 TCFL5Q9UL49 500 aa9.88□□□□□ -0.83
LDLR-214ENST00000560628 RIMKLBQ9ULI2 386 aa9.88□□□□□ -0.83
LDLR-214ENST00000560628 SNX7Q9UNH6 387 aa9.88□□□□□ -0.83
LDLR-214ENST00000560628 KLHL20Q9Y2M5 609 aa9.88□□□□□ -0.83
LDLR-214ENST00000560628 A6NL46 340 aa9.87□□□□□ -0.83
LDLR-214ENST00000560628 CYSRT1A8MQ03 144 aa9.87□□□□□ -0.83
LDLR-214ENST00000560628 F8W8V4 182 aa9.87□□□□□ -0.83
LDLR-214ENST00000560628 ZNF185O15231 689 aa9.87□□□□□ -0.83
LDLR-214ENST00000560628 OR2B3O76000 313 aa9.87□□□□□ -0.83
LDLR-214ENST00000560628 RAB40ALP0C0E4 278 aa9.87□□□□□ -0.83
LDLR-214ENST00000560628 MSL3P1P0C860 447 aa9.87□□□□□ -0.83
LDLR-214ENST00000560628 CBSLP0DN79 551 aa9.87□□□□□ -0.83
LDLR-214ENST00000560628 CBSP35520 551 aa9.87□□□□□ -0.83
LDLR-214ENST00000560628 PPARGP37231 505 aaPredicted RBP9.87□□□□□ -0.83
LDLR-214ENST00000560628 PLOD1Q02809 727 aaPredicted RBP9.87□□□□□ -0.83
LDLR-214ENST00000560628 ACVR1Q04771 509 aa9.87□□□□□ -0.83
LDLR-214ENST00000560628 PCID2Q5JVF3 399 aa9.87□□□□□ -0.83
LDLR-214ENST00000560628 MLIPQ5VWP3 458 aa9.87□□□□□ -0.83
LDLR-214ENST00000560628 FAM198BQ6UWH4 519 aa9.87□□□□□ -0.83
LDLR-214ENST00000560628 NLRP9Q7RTR0 991 aa9.87□□□□□ -0.83
LDLR-214ENST00000560628 GSTA5Q7RTV2 222 aa9.87□□□□□ -0.83
LDLR-214ENST00000560628 GPR135Q8IZ08 494 aa9.87□□□□□ -0.83
LDLR-214ENST00000560628 ZBTB2Q8N680 514 aa9.87□□□□□ -0.83
LDLR-214ENST00000560628 FLVCR1-AS1Q8TAF5 88 aa9.87□□□□□ -0.83
LDLR-214ENST00000560628 TCTN2Q96GX1 697 aa9.87□□□□□ -0.83
LDLR-214ENST00000560628 IL17FQ96PD4 163 aa9.87□□□□□ -0.83
LDLR-214ENST00000560628 SLC25A23Q9BV35 468 aa9.87□□□□□ -0.83
LDLR-214ENST00000560628 AP1M1Q9BXS5 423 aa9.87□□□□□ -0.83
LDLR-214ENST00000560628 CATSPERZQ9NTU4 200 aa9.87□□□□□ -0.83
LDLR-214ENST00000560628 IRAK4Q9NWZ3 460 aa9.87□□□□□ -0.83
LDLR-214ENST00000560628 OR6C2Q9NZP2 312 aa9.87□□□□□ -0.83
LDLR-214ENST00000560628 ANAPC5Q9UJX4 755 aa9.87□□□□□ -0.83
LDLR-214ENST00000560628 CDYLQ9Y232 598 aa9.87□□□□□ -0.83
LDLR-214ENST00000560628 DRG1Q9Y295 367 aaKnown RBP9.87□□□□□ -0.83
LDLR-214ENST00000560628 TENM4Q6N022 2769 aa9.87□□□□□ -0.83
LDLR-214ENST00000560628 PIKFYVEQ9Y2I7 2098 aa9.87□□□□□ -0.83
LDLR-214ENST00000560628 SEC16AO15027 2179 aa9.87□□□□□ -0.83
LDLR-214ENST00000560628 MYO18BQ8IUG5 2567 aa9.86□□□□□ -0.83
LDLR-214ENST00000560628 A0A0J9YY10 115 aa9.86□□□□□ -0.83
LDLR-214ENST00000560628 C9J4A7 227 aa9.86□□□□□ -0.83
LDLR-214ENST00000560628 CD3EAPO15446 510 aaKnown RBP9.86□□□□□ -0.83
LDLR-214ENST00000560628 CEP104O60308 925 aa9.86□□□□□ -0.83
LDLR-214ENST00000560628 GPC4O75487 556 aa9.86□□□□□ -0.83
LDLR-214ENST00000560628 TMEM63AO94886 807 aa9.86□□□□□ -0.83
LDLR-214ENST00000560628 FGGP02679 453 aa9.86□□□□□ -0.83
LDLR-214ENST00000560628 APOA4P06727 396 aa9.86□□□□□ -0.83
LDLR-214ENST00000560628 HBQ1P09105 142 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms